RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 ERICH6BQ5W0A0 696 aa14.85□□□□□ -0.03
RFPL3-201ENST00000249007 NPLOC4Q8TAT6 608 aa14.85□□□□□ -0.03
RFPL3-201ENST00000249007 TSHZ2Q9NRE2 1034 aa14.85□□□□□ -0.03
RFPL3-201ENST00000249007 KIAA0355O15063 1070 aa14.84□□□□□ -0.03
RFPL3-201ENST00000249007 RFX5P48382 616 aaPredicted RBP14.84□□□□□ -0.03
RFPL3-201ENST00000249007 MECOMQ03112 1051 aa14.84□□□□□ -0.03
RFPL3-201ENST00000249007 CCDC102BQ68D86 513 aa14.84□□□□□ -0.03
RFPL3-201ENST00000249007 LRFN3Q9BTN0 628 aa14.84□□□□□ -0.03
RFPL3-201ENST00000249007 CEP126Q9P2H0 1117 aa14.84□□□□□ -0.03
RFPL3-201ENST00000249007 ZNF316A6NFI3 1004 aaPredicted RBP14.83□□□□□ -0.03
RFPL3-201ENST00000249007 SEPT4O43236 478 aa14.83□□□□□ -0.03
RFPL3-201ENST00000249007 CNMDO75829 334 aa14.83□□□□□ -0.03
RFPL3-201ENST00000249007 MAP4K4O95819 1239 aaPredicted RBP14.83□□□□□ -0.03
RFPL3-201ENST00000249007 IGHA2P01877 340 aa14.83□□□□□ -0.03
RFPL3-201ENST00000249007 JAG1P78504 1218 aa14.83□□□□□ -0.03
RFPL3-201ENST00000249007 LRRC41Q15345 812 aa14.83□□□□□ -0.03
RFPL3-201ENST00000249007 SIL1Q9H173 461 aa14.83□□□□□ -0.03
RFPL3-201ENST00000249007 EMILIN3Q9NT22 766 aa14.83□□□□□ -0.03
RFPL3-201ENST00000249007 PI4KBQ9UBF8 816 aa14.83□□□□□ -0.03
RFPL3-201ENST00000249007 PDS5AQ29RF7 1337 aaKnown RBP14.83□□□□□ -0.04
RFPL3-201ENST00000249007 ZBTB22O15209 634 aa14.82□□□□□ -0.04
RFPL3-201ENST00000249007 IGFBP4P22692 258 aa14.82□□□□□ -0.04
RFPL3-201ENST00000249007 ADGRE1Q14246 886 aa14.82□□□□□ -0.04
RFPL3-201ENST00000249007 CCDC129Q6ZRS4 1044 aa14.82□□□□□ -0.04
RFPL3-201ENST00000249007 ZNF384Q8TF68 577 aa14.82□□□□□ -0.04
RFPL3-201ENST00000249007 PBX4Q9BYU1 374 aa14.82□□□□□ -0.04
RFPL3-201ENST00000249007 TSPYL2Q9H2G4 693 aaPredicted RBP14.82□□□□□ -0.04
RFPL3-201ENST00000249007 PRKRIP1Q9H875 184 aaPredicted RBP14.82□□□□□ -0.04
RFPL3-201ENST00000249007 TRANK1O15050 2925 aa14.82□□□□□ -0.04
RFPL3-201ENST00000249007 PQBP1O60828 265 aaKnown RBP14.82□□□□□ -0.04
RFPL3-201ENST00000249007 ADORA1P30542 326 aa14.82□□□□□ -0.04
RFPL3-201ENST00000249007 PBX2P40425 430 aa14.82□□□□□ -0.04
RFPL3-201ENST00000249007 SHROOM1Q2M3G4 852 aaPredicted RBP14.82□□□□□ -0.04
RFPL3-201ENST00000249007 OLFML2BQ68BL8 750 aa14.82□□□□□ -0.04
RFPL3-201ENST00000249007 USP17L2Q6R6M4 530 aa14.82□□□□□ -0.04
RFPL3-201ENST00000249007 DPP9Q86TI2 863 aa14.82□□□□□ -0.04
RFPL3-201ENST00000249007 TMEM39AQ9NV64 488 aa14.82□□□□□ -0.04
RFPL3-201ENST00000249007 CXXC1Q9P0U4 656 aaPredicted RBP14.82□□□□□ -0.04
RFPL3-201ENST00000249007 ZBTB21Q9ULJ3 1066 aa14.82□□□□□ -0.04
RFPL3-201ENST00000249007 PLXNA1Q9UIW2 1896 aa14.81□□□□□ -0.04
RFPL3-201ENST00000249007 USP17L15C9J2P7 530 aa14.81□□□□□ -0.04
RFPL3-201ENST00000249007 USP17L13C9JLJ4 530 aa14.81□□□□□ -0.04
RFPL3-201ENST00000249007 USP17L11C9JVI0 530 aa14.81□□□□□ -0.04
RFPL3-201ENST00000249007 USP17L18D6R9N7 530 aa14.81□□□□□ -0.04
RFPL3-201ENST00000249007 USP17L22D6RA61 530 aa14.81□□□□□ -0.04
RFPL3-201ENST00000249007 USP17L17D6RBQ6 530 aa14.81□□□□□ -0.04
RFPL3-201ENST00000249007 USP17L19D6RCP7 530 aa14.81□□□□□ -0.04
RFPL3-201ENST00000249007 USP17L20D6RJB6 530 aa14.81□□□□□ -0.04
RFPL3-201ENST00000249007 CIAO1O76071 339 aa14.81□□□□□ -0.04
RFPL3-201ENST00000249007 GDF11O95390 407 aa14.81□□□□□ -0.04
RFPL3-201ENST00000249007 BMP1P13497 986 aa14.81□□□□□ -0.04
RFPL3-201ENST00000249007 USP17L24Q0WX57 530 aa14.81□□□□□ -0.04
RFPL3-201ENST00000249007 FAM47AQ5JRC9 791 aa14.81□□□□□ -0.04
RFPL3-201ENST00000249007 TEX11Q8IYF3 940 aa14.81□□□□□ -0.04
RFPL3-201ENST00000249007 TRIM34Q9BYJ4 488 aa14.81□□□□□ -0.04
RFPL3-201ENST00000249007 DHX36Q9H2U1 1008 aaKnown RBP14.81□□□□□ -0.04
RFPL3-201ENST00000249007 GINM1Q9NU53 330 aa14.81□□□□□ -0.04
RFPL3-201ENST00000249007 FBXO3Q9UK99 471 aa14.81□□□□□ -0.04
RFPL3-201ENST00000249007 PHF24Q9UPV7 400 aa14.81□□□□□ -0.04
RFPL3-201ENST00000249007 LDHCP07864 332 aa14.8□□□□□ -0.04
RFPL3-201ENST00000249007 GSTO1P78417 241 aa14.8□□□□□ -0.04
RFPL3-201ENST00000249007 TMEM31Q5JXX7 168 aa14.8□□□□□ -0.04
RFPL3-201ENST00000249007 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.8□□□□□ -0.04
RFPL3-201ENST00000249007 USP44Q9H0E7 712 aa14.8□□□□□ -0.04
RFPL3-201ENST00000249007 EPHX3Q9H6B9 360 aa14.8□□□□□ -0.04
RFPL3-201ENST00000249007 DNAJC18Q9H819 358 aa14.8□□□□□ -0.04
RFPL3-201ENST00000249007 BTBD7Q9P203 1132 aa14.8□□□□□ -0.04
RFPL3-201ENST00000249007 SIPA1L1O43166 1804 aa14.8□□□□□ -0.04
RFPL3-201ENST00000249007 GRXCR1A8MXD5 290 aa14.79□□□□□ -0.04
RFPL3-201ENST00000249007 ADORA2AP29274 412 aa14.79□□□□□ -0.04
RFPL3-201ENST00000249007 ZYXQ15942 572 aaKnown RBP14.79□□□□□ -0.04
RFPL3-201ENST00000249007 AAK1Q2M2I8 961 aa14.79□□□□□ -0.04
RFPL3-201ENST00000249007 CRACR2BQ8N4Y2 399 aaPredicted RBP14.79□□□□□ -0.04
RFPL3-201ENST00000249007 SLC44A5Q8NCS7 719 aa14.79□□□□□ -0.04
RFPL3-201ENST00000249007 FEZ1Q99689 392 aa14.79□□□□□ -0.04
RFPL3-201ENST00000249007 TFF2Q03403 129 aa14.78□□□□□ -0.04
RFPL3-201ENST00000249007 LBX2Q6XYB7 198 aa14.78□□□□□ -0.04
RFPL3-201ENST00000249007 ALYREFQ86V81 257 aaKnown RBP14.78□□□□□ -0.04
RFPL3-201ENST00000249007 WDR63Q8IWG1 891 aa14.78□□□□□ -0.04
RFPL3-201ENST00000249007 NSUN4Q96CB9 384 aaKnown RBP14.78□□□□□ -0.04
RFPL3-201ENST00000249007 C12orf42Q96LP6 360 aa14.78□□□□□ -0.04
RFPL3-201ENST00000249007 SMCHD1A6NHR9 2005 aa14.78□□□□□ -0.04
RFPL3-201ENST00000249007 PRRC2BQ5JSZ5 2229 aaKnown RBP14.78□□□□□ -0.04
RFPL3-201ENST00000249007 IL15P40933 162 aaPredicted RBP14.77□□□□□ -0.04
RFPL3-201ENST00000249007 KCNQ1P51787 676 aa14.77□□□□□ -0.04
RFPL3-201ENST00000249007 PRAMEF19Q5SWL8 479 aa14.77□□□□□ -0.04
RFPL3-201ENST00000249007 CCDC174Q6PII3 467 aa14.77□□□□□ -0.04
RFPL3-201ENST00000249007 CATSPERGQ6ZRH7 1159 aa14.77□□□□□ -0.04
RFPL3-201ENST00000249007 METTL16Q86W50 562 aaKnown RBP14.77□□□□□ -0.04
RFPL3-201ENST00000249007 FOXP4Q8IVH2 680 aaPredicted RBP14.77□□□□□ -0.04
RFPL3-201ENST00000249007 SH3RF3Q8TEJ3 882 aaPredicted RBP14.77□□□□□ -0.04
RFPL3-201ENST00000249007 XPNPEP3Q9NQH7 507 aa14.77□□□□□ -0.04
RFPL3-201ENST00000249007 ZNF236Q9UL36 1845 aa14.77□□□□□ -0.04
RFPL3-201ENST00000249007 A0A1W2PQ45 241 aaPredicted RBP14.76□□□□□ -0.05
RFPL3-201ENST00000249007 A0A1W2PQY0 241 aa14.76□□□□□ -0.05
RFPL3-201ENST00000249007 DCDC2CA8MYV0 355 aa14.76□□□□□ -0.05
RFPL3-201ENST00000249007 STRNO43815 780 aa14.76□□□□□ -0.05
RFPL3-201ENST00000249007 TIMP1P01033 207 aa14.76□□□□□ -0.05
RFPL3-201ENST00000249007 RARBP10826 455 aa14.76□□□□□ -0.05
RFPL3-201ENST00000249007 VCAM1P19320 739 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms