RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 FXR1P51114 621 aaKnown RBP eCLIP10.42□□□□□ -0.74
SRSF6-201ENST00000244020 CLNS1AP54105 237 aaKnown RBP10.42□□□□□ -0.74
SRSF6-201ENST00000244020 MAP2K1Q02750 393 aaPredicted RBP10.42□□□□□ -0.74
SRSF6-201ENST00000244020 PI16Q6UXB8 463 aa10.42□□□□□ -0.74
SRSF6-201ENST00000244020 CMTR1Q8N1G2 835 aaKnown RBP10.42□□□□□ -0.74
SRSF6-201ENST00000244020 FBXL16Q8N461 479 aa10.42□□□□□ -0.74
SRSF6-201ENST00000244020 PLBD2Q8NHP8 589 aa10.42□□□□□ -0.74
SRSF6-201ENST00000244020 AIDAQ96BJ3 306 aa10.42□□□□□ -0.74
SRSF6-201ENST00000244020 PAIP2Q9BPZ3 127 aaKnown RBP10.42□□□□□ -0.74
SRSF6-201ENST00000244020 CSRNP2Q9H175 543 aa10.42□□□□□ -0.74
SRSF6-201ENST00000244020 YY1AP1Q9H869 796 aa10.42□□□□□ -0.74
SRSF6-201ENST00000244020 GOLGA6BA6NDN3 693 aa10.42□□□□□ -0.74
SRSF6-201ENST00000244020 TATP17735 454 aaPredicted RBP10.42□□□□□ -0.74
SRSF6-201ENST00000244020 ZC3H6P61129 1189 aaKnown RBP10.42□□□□□ -0.74
SRSF6-201ENST00000244020 UBXN1Q04323 297 aa10.42□□□□□ -0.74
SRSF6-201ENST00000244020 MICALCLQ6ZW33 695 aa10.42□□□□□ -0.74
SRSF6-201ENST00000244020 RPAINQ86UA6 219 aa10.42□□□□□ -0.74
SRSF6-201ENST00000244020 BCAS4Q8TDM0 211 aa10.42□□□□□ -0.74
SRSF6-201ENST00000244020 GPR108Q9NPR9 543 aa10.42□□□□□ -0.74
SRSF6-201ENST00000244020 TAB2Q9NYJ8 693 aa10.42□□□□□ -0.74
SRSF6-201ENST00000244020 TBC1D2BQ9UPU7 963 aa10.42□□□□□ -0.74
SRSF6-201ENST00000244020 PCDHB6Q9Y5E3 794 aa10.42□□□□□ -0.74
SRSF6-201ENST00000244020 PLEKHG1Q9ULL1 1385 aa10.41□□□□□ -0.74
SRSF6-201ENST00000244020 XBP1P17861 261 aa10.41□□□□□ -0.74
SRSF6-201ENST00000244020 CABP4P57796 275 aa10.41□□□□□ -0.74
SRSF6-201ENST00000244020 MMS22LQ6ZRQ5 1243 aa10.41□□□□□ -0.74
SRSF6-201ENST00000244020 CYB5R4Q7L1T6 521 aa10.41□□□□□ -0.74
SRSF6-201ENST00000244020 MYO1AQ9UBC5 1043 aa10.41□□□□□ -0.74
SRSF6-201ENST00000244020 HDAC6Q9UBN7 1215 aa10.41□□□□□ -0.74
SRSF6-201ENST00000244020 NALCNQ8IZF0 1738 aa10.41□□□□□ -0.74
SRSF6-201ENST00000244020 SRGAP2O75044 1071 aa10.41□□□□□ -0.74
SRSF6-201ENST00000244020 RPS6KA5O75582 802 aa10.41□□□□□ -0.74
SRSF6-201ENST00000244020 ABL1P00519 1130 aa10.41□□□□□ -0.74
SRSF6-201ENST00000244020 PTPREP23469 700 aa10.41□□□□□ -0.74
SRSF6-201ENST00000244020 CDC25AP30304 524 aa10.41□□□□□ -0.74
SRSF6-201ENST00000244020 GGCXP38435 758 aa10.41□□□□□ -0.74
SRSF6-201ENST00000244020 MATR3P43243 847 aaKnown RBP eCLIP10.41□□□□□ -0.74
SRSF6-201ENST00000244020 CKAP4Q07065 602 aaKnown RBP10.41□□□□□ -0.74
SRSF6-201ENST00000244020 NR5A1Q13285 461 aa10.41□□□□□ -0.74
SRSF6-201ENST00000244020 ZRSR2Q15696 482 aaKnown RBP10.41□□□□□ -0.74
SRSF6-201ENST00000244020 USP49Q70CQ1 688 aa10.41□□□□□ -0.74
SRSF6-201ENST00000244020 TMEM87BQ96K49 555 aa10.41□□□□□ -0.74
SRSF6-201ENST00000244020 ZKSCAN3Q9BRR0 538 aa10.41□□□□□ -0.74
SRSF6-201ENST00000244020 ZNHIT6Q9NWK9 470 aaKnown RBP10.41□□□□□ -0.74
SRSF6-201ENST00000244020 GEMIN8Q9NWZ8 242 aaKnown RBP10.41□□□□□ -0.74
SRSF6-201ENST00000244020 SLIT1O75093 1534 aa10.41□□□□□ -0.74
SRSF6-201ENST00000244020 MDM2Q00987 491 aaPredicted RBP10.41□□□□□ -0.74
SRSF6-201ENST00000244020 TTC19Q6DKK2 380 aaPredicted RBP10.41□□□□□ -0.74
SRSF6-201ENST00000244020 IQCEQ6IPM2 695 aa10.41□□□□□ -0.74
SRSF6-201ENST00000244020 NAPBQ9H115 298 aa10.41□□□□□ -0.74
SRSF6-201ENST00000244020 SENP2Q9HC62 589 aa10.41□□□□□ -0.74
SRSF6-201ENST00000244020 MAPK8IP1Q9UQF2 711 aa10.41□□□□□ -0.74
SRSF6-201ENST00000244020 EPN1Q9Y6I3 576 aaPredicted RBP10.41□□□□□ -0.74
SRSF6-201ENST00000244020 A0A1B0GUA9 196 aa10.4□□□□□ -0.74
SRSF6-201ENST00000244020 SH2B2O14492 632 aaPredicted RBP10.4□□□□□ -0.74
SRSF6-201ENST00000244020 ZEB2O60315 1214 aa10.4□□□□□ -0.74
SRSF6-201ENST00000244020 ATP6V1AP38606 617 aa10.4□□□□□ -0.74
SRSF6-201ENST00000244020 RTN1Q16799 776 aa10.4□□□□□ -0.74
SRSF6-201ENST00000244020 ZFYVE27Q5T4F4 411 aa10.4□□□□□ -0.74
SRSF6-201ENST00000244020 GSPT2Q8IYD1 628 aaKnown RBP10.4□□□□□ -0.74
SRSF6-201ENST00000244020 NCAPGQ9BPX3 1015 aa10.4□□□□□ -0.74
SRSF6-201ENST00000244020 ADD3Q9UEY8 706 aaKnown RBP10.4□□□□□ -0.74
SRSF6-201ENST00000244020 UBN2Q6ZU65 1347 aa10.4□□□□□ -0.74
SRSF6-201ENST00000244020 TRIM75PA6NK02 468 aa10.4□□□□□ -0.74
SRSF6-201ENST00000244020 GYPCP04921 128 aa10.4□□□□□ -0.74
SRSF6-201ENST00000244020 INPP5BP32019 993 aa10.4□□□□□ -0.74
SRSF6-201ENST00000244020 METTL24Q5JXM2 366 aa10.4□□□□□ -0.74
SRSF6-201ENST00000244020 ABHD10Q9NUJ1 306 aa10.4□□□□□ -0.74
SRSF6-201ENST00000244020 N4BP2Q86UW6 1770 aaPredicted RBP10.4□□□□□ -0.74
SRSF6-201ENST00000244020 ABCC6O95255 1503 aa10.4□□□□□ -0.74
SRSF6-201ENST00000244020 MCTP2Q6DN12 878 aa10.4□□□□□ -0.74
SRSF6-201ENST00000244020 EPSTI1Q96J88 318 aa10.4□□□□□ -0.74
SRSF6-201ENST00000244020 TRIM10Q9UDY6 481 aa10.4□□□□□ -0.74
SRSF6-201ENST00000244020 FBXO2Q9UK22 296 aaPredicted RBP10.4□□□□□ -0.74
SRSF6-201ENST00000244020 LUC7L2Q9Y383 392 aaKnown RBP10.4□□□□□ -0.74
SRSF6-201ENST00000244020 FAM237AA0A1B0GTK4 181 aa10.39□□□□□ -0.75
SRSF6-201ENST00000244020 TMCO5BA8MYB1 307 aa10.39□□□□□ -0.75
SRSF6-201ENST00000244020 MMP1P03956 469 aa10.39□□□□□ -0.75
SRSF6-201ENST00000244020 FOXO4P98177 505 aa10.39□□□□□ -0.75
SRSF6-201ENST00000244020 SPAG1Q07617 926 aa10.39□□□□□ -0.75
SRSF6-201ENST00000244020 TBC1D10CQ8IV04 446 aa10.39□□□□□ -0.75
SRSF6-201ENST00000244020 CAPS2Q9BXY5 557 aa10.39□□□□□ -0.75
SRSF6-201ENST00000244020 GNL3LQ9NVN8 582 aaKnown RBP10.39□□□□□ -0.75
SRSF6-201ENST00000244020 KRT86O43790 486 aa10.39□□□□□ -0.75
SRSF6-201ENST00000244020 USP14P54578 494 aa10.39□□□□□ -0.75
SRSF6-201ENST00000244020 GNGT1P63211 74 aa10.39□□□□□ -0.75
SRSF6-201ENST00000244020 COG1Q8WTW3 980 aa10.39□□□□□ -0.75
SRSF6-201ENST00000244020 BLZF1Q9H2G9 400 aa10.39□□□□□ -0.75
SRSF6-201ENST00000244020 VIPAS39Q9H9C1 493 aa10.39□□□□□ -0.75
SRSF6-201ENST00000244020 FAM169AQ9Y6X4 670 aa10.39□□□□□ -0.75
SRSF6-201ENST00000244020 CCDC196A0A1B0GTZ2 297 aa10.39□□□□□ -0.75
SRSF6-201ENST00000244020 FRMD3A2A2Y4 597 aa10.39□□□□□ -0.75
SRSF6-201ENST00000244020 GCKP35557 465 aa10.39□□□□□ -0.75
SRSF6-201ENST00000244020 MSL3Q8N5Y2 521 aaKnown RBP10.39□□□□□ -0.75
SRSF6-201ENST00000244020 JAKMIP2Q96AA8 810 aa10.39□□□□□ -0.75
SRSF6-201ENST00000244020 MAGEC2Q9UBF1 373 aaPredicted RBP10.39□□□□□ -0.75
SRSF6-201ENST00000244020 HPCAL4Q9UM19 191 aa10.39□□□□□ -0.75
SRSF6-201ENST00000244020 SRPRBQ9Y5M8 271 aaKnown RBP10.39□□□□□ -0.75
SRSF6-201ENST00000244020 NWD1Q149M9 1564 aa10.39□□□□□ -0.75
SRSF6-201ENST00000244020 DIP2BQ9P265 1576 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms