RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 SPDYE5A6NIY4 337 aa11.98□□□□□ -0.49
HMGCL-201ENST00000235958 EEF2P13639 858 aaKnown RBP11.98□□□□□ -0.49
HMGCL-201ENST00000235958 ANTXR2P58335 489 aa11.98□□□□□ -0.49
HMGCL-201ENST00000235958 ATP2B2Q01814 1243 aa11.98□□□□□ -0.49
HMGCL-201ENST00000235958 PPATQ06203 517 aa11.98□□□□□ -0.49
HMGCL-201ENST00000235958 SPP2Q13103 211 aa11.98□□□□□ -0.49
HMGCL-201ENST00000235958 DEFB115Q30KQ5 88 aa11.98□□□□□ -0.49
HMGCL-201ENST00000235958 BLOC1S2Q6QNY1 142 aa11.98□□□□□ -0.49
HMGCL-201ENST00000235958 IQCA1Q86XH1 822 aa11.98□□□□□ -0.49
HMGCL-201ENST00000235958 CLEC10AQ8IUN9 316 aa11.98□□□□□ -0.49
HMGCL-201ENST00000235958 ACER1Q8TDN7 264 aa11.98□□□□□ -0.49
HMGCL-201ENST00000235958 IGDCC4Q8TDY8 1250 aa11.98□□□□□ -0.49
HMGCL-201ENST00000235958 OPTNQ96CV9 577 aa11.98□□□□□ -0.49
HMGCL-201ENST00000235958 IL17RAQ96F46 866 aa11.98□□□□□ -0.49
HMGCL-201ENST00000235958 HHIPL1Q96JK4 782 aa11.98□□□□□ -0.49
HMGCL-201ENST00000235958 TTC14Q96N46 770 aa11.98□□□□□ -0.49
HMGCL-201ENST00000235958 TBC1D32Q96NH3 1257 aa11.98□□□□□ -0.49
HMGCL-201ENST00000235958 ZSCAN10Q96SZ4 725 aaPredicted RBP11.98□□□□□ -0.49
HMGCL-201ENST00000235958 WDR18Q9BV38 432 aa11.98□□□□□ -0.49
HMGCL-201ENST00000235958 ZSWIM6Q9HCJ5 1215 aa11.98□□□□□ -0.49
HMGCL-201ENST00000235958 NYAP2Q9P242 653 aa11.98□□□□□ -0.49
HMGCL-201ENST00000235958 CYP46A1Q9Y6A2 500 aa11.98□□□□□ -0.49
HMGCL-201ENST00000235958 ATAD5Q96QE3 1844 aa11.97□□□□□ -0.49
HMGCL-201ENST00000235958 A0A1W2PRG0 241 aa11.97□□□□□ -0.49
HMGCL-201ENST00000235958 IFIT3O14879 490 aaKnown RBP11.97□□□□□ -0.49
HMGCL-201ENST00000235958 IRF6O14896 467 aa11.97□□□□□ -0.49
HMGCL-201ENST00000235958 PRC1O43663 620 aa11.97□□□□□ -0.49
HMGCL-201ENST00000235958 TTLL1O95922 423 aa11.97□□□□□ -0.49
HMGCL-201ENST00000235958 CASTP20810 708 aaKnown RBP11.97□□□□□ -0.49
HMGCL-201ENST00000235958 GJA5P36382 358 aa11.97□□□□□ -0.49
HMGCL-201ENST00000235958 NOVP48745 357 aa11.97□□□□□ -0.49
HMGCL-201ENST00000235958 HTRA3P83110 453 aa11.97□□□□□ -0.49
HMGCL-201ENST00000235958 CCDC178Q5BJE1 867 aa11.97□□□□□ -0.49
HMGCL-201ENST00000235958 SPRYD7Q5W111 196 aa11.97□□□□□ -0.49
HMGCL-201ENST00000235958 RCSD1Q6JBY9 416 aa11.97□□□□□ -0.49
HMGCL-201ENST00000235958 RUFY3Q7L099 469 aa11.97□□□□□ -0.49
HMGCL-201ENST00000235958 DGKHQ86XP1 1220 aa11.97□□□□□ -0.49
HMGCL-201ENST00000235958 ZNF280CQ8ND82 737 aa11.97□□□□□ -0.49
HMGCL-201ENST00000235958 ANKS1AQ92625 1134 aa11.97□□□□□ -0.49
HMGCL-201ENST00000235958 MKL1Q969V6 931 aa11.97□□□□□ -0.49
HMGCL-201ENST00000235958 CCDC102AQ96A19 550 aa11.97□□□□□ -0.49
HMGCL-201ENST00000235958 OTUD5Q96G74 571 aa11.97□□□□□ -0.49
HMGCL-201ENST00000235958 WNK4Q96J92 1243 aa11.97□□□□□ -0.49
HMGCL-201ENST00000235958 TCEANC2Q96MN5 208 aa11.97□□□□□ -0.49
HMGCL-201ENST00000235958 KIF2CQ99661 725 aa11.97□□□□□ -0.49
HMGCL-201ENST00000235958 UBAC1Q9BSL1 405 aa11.97□□□□□ -0.49
HMGCL-201ENST00000235958 UPF3BQ9BZI7 483 aaKnown RBP11.97□□□□□ -0.49
HMGCL-201ENST00000235958 TRIM75PA6NK02 468 aa11.96□□□□□ -0.49
HMGCL-201ENST00000235958 RASSF10A6NK89 507 aa11.96□□□□□ -0.49
HMGCL-201ENST00000235958 USP17L10C9JJH3 530 aa11.96□□□□□ -0.49
HMGCL-201ENST00000235958 CXCL11O14625 94 aa11.96□□□□□ -0.49
HMGCL-201ENST00000235958 HSPA6P17066 643 aa11.96□□□□□ -0.49
HMGCL-201ENST00000235958 RPS6KB1P23443 525 aa11.96□□□□□ -0.49
HMGCL-201ENST00000235958 ECE1P42892 770 aa11.96□□□□□ -0.49
HMGCL-201ENST00000235958 ICA1Q05084 483 aa11.96□□□□□ -0.49
HMGCL-201ENST00000235958 MKRN3Q13064 507 aaKnown RBP11.96□□□□□ -0.49
HMGCL-201ENST00000235958 PPIL2Q13356 520 aa11.96□□□□□ -0.49
HMGCL-201ENST00000235958 SEC23AQ15436 765 aa11.96□□□□□ -0.49
HMGCL-201ENST00000235958 TMEM67Q5HYA8 995 aa11.96□□□□□ -0.49
HMGCL-201ENST00000235958 ENAHQ8N8S7 591 aaPredicted RBP11.96□□□□□ -0.49
HMGCL-201ENST00000235958 LRRC2Q9BYS8 371 aa11.96□□□□□ -0.49
HMGCL-201ENST00000235958 TBC1D2Q9BYX2 928 aa11.96□□□□□ -0.49
HMGCL-201ENST00000235958 AS3MTQ9HBK9 375 aa11.96□□□□□ -0.49
HMGCL-201ENST00000235958 GPHNQ9NQX3 736 aaPredicted RBP11.96□□□□□ -0.49
HMGCL-201ENST00000235958 STX8Q9UNK0 236 aa11.96□□□□□ -0.49
HMGCL-201ENST00000235958 OTOFQ9HC10 1997 aa11.96□□□□□ -0.5
HMGCL-201ENST00000235958 DOCK1Q14185 1865 aa11.95□□□□□ -0.5
HMGCL-201ENST00000235958 PHIPQ8WWQ0 1821 aa11.95□□□□□ -0.5
HMGCL-201ENST00000235958 PLIN4Q96Q06 1357 aa11.95□□□□□ -0.5
HMGCL-201ENST00000235958 WDR19Q8NEZ3 1342 aa11.95□□□□□ -0.5
HMGCL-201ENST00000235958 ERICH2A1L162 156 aa11.95□□□□□ -0.5
HMGCL-201ENST00000235958 FAM155AB1AL88 458 aaPredicted RBP11.95□□□□□ -0.5
HMGCL-201ENST00000235958 C19orf81C9J6K1 198 aa11.95□□□□□ -0.5
HMGCL-201ENST00000235958 TOP1P11387 765 aaKnown RBP11.95□□□□□ -0.5
HMGCL-201ENST00000235958 NEK4P51957 841 aa11.95□□□□□ -0.5
HMGCL-201ENST00000235958 BACE1P56817 501 aa11.95□□□□□ -0.5
HMGCL-201ENST00000235958 SART3Q15020 963 aaKnown RBP11.95□□□□□ -0.5
HMGCL-201ENST00000235958 PPP4R3BQ5MIZ7 849 aa11.95□□□□□ -0.5
HMGCL-201ENST00000235958 CYP4F22Q6NT55 531 aa11.95□□□□□ -0.5
HMGCL-201ENST00000235958 PAXIP1Q6ZW49 1069 aaPredicted RBP11.95□□□□□ -0.5
HMGCL-201ENST00000235958 RASAL3Q86YV0 1011 aa11.95□□□□□ -0.5
HMGCL-201ENST00000235958 TMTC2Q8N394 836 aa11.95□□□□□ -0.5
HMGCL-201ENST00000235958 MS4A4AQ96JQ5 239 aa11.95□□□□□ -0.5
HMGCL-201ENST00000235958 TMEM87BQ96K49 555 aa11.95□□□□□ -0.5
HMGCL-201ENST00000235958 TMEM47Q9BQJ4 181 aa11.95□□□□□ -0.5
HMGCL-201ENST00000235958 MTA3Q9BTC8 594 aa11.95□□□□□ -0.5
HMGCL-201ENST00000235958 SENP2Q9HC62 589 aa11.95□□□□□ -0.5
HMGCL-201ENST00000235958 ARHGEF10LQ9HCE6 1279 aa11.95□□□□□ -0.5
HMGCL-201ENST00000235958 KCNH4Q9UQ05 1017 aa11.95□□□□□ -0.5
HMGCL-201ENST00000235958 TMX2Q9Y320 296 aa11.95□□□□□ -0.5
HMGCL-201ENST00000235958 GREB1LQ9C091 1923 aaPredicted RBP11.94□□□□□ -0.5
HMGCL-201ENST00000235958 MYH4Q9Y623 1939 aa11.94□□□□□ -0.5
HMGCL-201ENST00000235958 TNKSO95271 1327 aa11.94□□□□□ -0.5
HMGCL-201ENST00000235958 F5H6K3 240 aa11.94□□□□□ -0.5
HMGCL-201ENST00000235958 SLC10A3P09131 477 aa11.94□□□□□ -0.5
HMGCL-201ENST00000235958 ZBTB48P10074 688 aaPredicted RBP11.94□□□□□ -0.5
HMGCL-201ENST00000235958 LIFRP42702 1097 aa11.94□□□□□ -0.5
HMGCL-201ENST00000235958 FGD1P98174 961 aa11.94□□□□□ -0.5
HMGCL-201ENST00000235958 KLRC3Q07444 240 aa11.94□□□□□ -0.5
HMGCL-201ENST00000235958 GRM1Q13255 1194 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms