RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 MTX1Q13505 466 aa12.81□□□□□ -0.36
LAMA4-201ENST00000230538 HHATQ5VTY9 493 aa12.81□□□□□ -0.36
LAMA4-201ENST00000230538 RUFY4Q6ZNE9 571 aa12.81□□□□□ -0.36
LAMA4-201ENST00000230538 KBTBD3Q8NAB2 608 aa12.81□□□□□ -0.36
LAMA4-201ENST00000230538 RASSF4Q9H2L5 321 aa12.81□□□□□ -0.36
LAMA4-201ENST00000230538 KRT19P08727 400 aa12.81□□□□□ -0.36
LAMA4-201ENST00000230538 RAD51AP2Q09MP3 1159 aa12.81□□□□□ -0.36
LAMA4-201ENST00000230538 CROCCP2Q86T23 111 aa12.81□□□□□ -0.36
LAMA4-201ENST00000230538 LGR6Q9HBX8 967 aa12.81□□□□□ -0.36
LAMA4-201ENST00000230538 WDR62O43379 1518 aa12.81□□□□□ -0.36
LAMA4-201ENST00000230538 PPP2R5BQ15173 497 aa12.81□□□□□ -0.36
LAMA4-201ENST00000230538 KRT40Q6A162 431 aa12.81□□□□□ -0.36
LAMA4-201ENST00000230538 LMBRD1Q9NUN5 540 aa12.81□□□□□ -0.36
LAMA4-201ENST00000230538 IVNS1ABPQ9Y6Y0 642 aa12.81□□□□□ -0.36
LAMA4-201ENST00000230538 FAM170AA1A519 330 aa12.81□□□□□ -0.36
LAMA4-201ENST00000230538 FLOT1O75955 427 aa12.81□□□□□ -0.36
LAMA4-201ENST00000230538 CCDC62Q6P9F0 684 aa12.81□□□□□ -0.36
LAMA4-201ENST00000230538 DPP8Q6V1X1 898 aaPredicted RBP12.81□□□□□ -0.36
LAMA4-201ENST00000230538 TSKSQ9UJT2 592 aa12.81□□□□□ -0.36
LAMA4-201ENST00000230538 MROH5Q6ZUA9 1318 aa12.81□□□□□ -0.36
LAMA4-201ENST00000230538 ZNF532Q9HCE3 1301 aa12.81□□□□□ -0.36
LAMA4-201ENST00000230538 GOLGA6BA6NDN3 693 aa12.81□□□□□ -0.36
LAMA4-201ENST00000230538 SEPT14Q6ZU15 432 aa12.81□□□□□ -0.36
LAMA4-201ENST00000230538 CCDC125Q86Z20 511 aa12.81□□□□□ -0.36
LAMA4-201ENST00000230538 MYO1AQ9UBC5 1043 aa12.81□□□□□ -0.36
LAMA4-201ENST00000230538 NFE2L3Q9Y4A8 694 aa12.81□□□□□ -0.36
LAMA4-201ENST00000230538 TACC3Q9Y6A5 838 aa12.81□□□□□ -0.36
LAMA4-201ENST00000230538 DNMT1P26358 1616 aaKnown RBP12.81□□□□□ -0.36
LAMA4-201ENST00000230538 PSMB7Q99436 277 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 PLCB1Q9NQ66 1216 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 KAT6BQ8WYB5 2073 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 PCK1P35558 622 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 ZNF445P59923 1031 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 PAK2Q13177 524 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 CCDC105Q8IYK2 499 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 ARHGEF2Q92974 986 aaKnown RBP12.8□□□□□ -0.36
LAMA4-201ENST00000230538 MCUR1Q96AQ8 359 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 CDCA7Q9BWT1 371 aaPredicted RBP12.8□□□□□ -0.36
LAMA4-201ENST00000230538 VCX3BQ9H321 246 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 EIF4G3O43432 1585 aaKnown RBP12.8□□□□□ -0.36
LAMA4-201ENST00000230538 HOXB7P09629 217 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 CFAP221Q4G0U5 840 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 ZNF408Q9H9D4 720 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 SBNO1A3KN83 1393 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 PRPF6O94906 941 aaKnown RBP12.8□□□□□ -0.36
LAMA4-201ENST00000230538 DNM2P50570 870 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 RPS6KA1Q15418 735 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 CASC4Q6P4E1 433 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 TRMT44Q8IYL2 757 aaKnown RBP12.8□□□□□ -0.36
LAMA4-201ENST00000230538 CPXCR1Q8N123 301 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 hCG_1642624A0A1W2PR95 340 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 A6NNZ2 444 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 I3L4J1 428 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 ARHGAP6O43182 974 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 TCP10Q12799 353 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 TUBB8Q3ZCM7 444 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 LGSNQ5TDP6 509 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 PEX26Q7Z412 305 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 NSMCE1Q8WV22 266 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 NACA2Q9H009 215 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 SLC52A2Q9HAB3 445 aa12.8□□□□□ -0.36
LAMA4-201ENST00000230538 HGSO14964 777 aaPredicted RBP12.79□□□□□ -0.36
LAMA4-201ENST00000230538 MAPKAPK5Q8IW41 473 aa12.79□□□□□ -0.36
LAMA4-201ENST00000230538 TGFBRAP1Q8WUH2 860 aa12.79□□□□□ -0.36
LAMA4-201ENST00000230538 KDM5AP29375 1690 aaKnown RBP12.79□□□□□ -0.36
LAMA4-201ENST00000230538 CFBP00751 764 aa12.79□□□□□ -0.36
LAMA4-201ENST00000230538 ZAP70P43403 619 aa12.79□□□□□ -0.36
LAMA4-201ENST00000230538 PPP2R5CQ13362 524 aa12.79□□□□□ -0.36
LAMA4-201ENST00000230538 SRGAP1Q7Z6B7 1085 aa12.79□□□□□ -0.36
LAMA4-201ENST00000230538 LMNTD2Q8IXW0 634 aa12.79□□□□□ -0.36
LAMA4-201ENST00000230538 SLF1Q9BQI6 1058 aa12.79□□□□□ -0.36
LAMA4-201ENST00000230538 BUB1BO60566 1050 aaPredicted RBP12.79□□□□□ -0.36
LAMA4-201ENST00000230538 MYRIPQ8NFW9 859 aa12.79□□□□□ -0.36
LAMA4-201ENST00000230538 HOOK2Q96ED9 719 aa12.79□□□□□ -0.36
LAMA4-201ENST00000230538 STK32BQ9NY57 414 aa12.79□□□□□ -0.36
LAMA4-201ENST00000230538 CD19P15391 556 aa12.79□□□□□ -0.36
LAMA4-201ENST00000230538 INPP5BP32019 993 aa12.79□□□□□ -0.36
LAMA4-201ENST00000230538 MTMR3Q13615 1198 aa12.79□□□□□ -0.36
LAMA4-201ENST00000230538 POTEDQ86YR6 584 aa12.79□□□□□ -0.36
LAMA4-201ENST00000230538 SMAP1Q8IYB5 467 aaPredicted RBP12.79□□□□□ -0.36
LAMA4-201ENST00000230538 CCDC89Q8N998 374 aa12.79□□□□□ -0.36
LAMA4-201ENST00000230538 EDC4Q6P2E9 1401 aaKnown RBP12.79□□□□□ -0.36
LAMA4-201ENST00000230538 PER1O15534 1290 aaPredicted RBP12.79□□□□□ -0.36
LAMA4-201ENST00000230538 TYW1BQ6NUM6 668 aa12.79□□□□□ -0.36
LAMA4-201ENST00000230538 VSIG1Q86XK7 387 aa12.79□□□□□ -0.36
LAMA4-201ENST00000230538 FNBP4Q8N3X1 1017 aaPredicted RBP12.79□□□□□ -0.36
LAMA4-201ENST00000230538 VPS54Q9P1Q0 977 aa12.79□□□□□ -0.36
LAMA4-201ENST00000230538 A1BGP04217 495 aa12.78□□□□□ -0.36
LAMA4-201ENST00000230538 PSMD6Q15008 389 aa12.78□□□□□ -0.36
LAMA4-201ENST00000230538 ARHGAP44Q17R89 818 aa12.78□□□□□ -0.36
LAMA4-201ENST00000230538 PLEKHA4Q9H4M7 779 aa12.78□□□□□ -0.36
LAMA4-201ENST00000230538 E7EWF7 191 aa12.78□□□□□ -0.36
LAMA4-201ENST00000230538 CCDC87Q9NVE4 849 aa12.78□□□□□ -0.36
LAMA4-201ENST00000230538 HAUS2Q9NVX0 235 aa12.78□□□□□ -0.36
LAMA4-201ENST00000230538 H0YIN7 160 aa12.78□□□□□ -0.36
LAMA4-201ENST00000230538 TBC1D8O95759 1140 aa12.78□□□□□ -0.36
LAMA4-201ENST00000230538 KRT15P19012 456 aa12.78□□□□□ -0.36
LAMA4-201ENST00000230538 RRAGAQ7L523 313 aa12.78□□□□□ -0.36
LAMA4-201ENST00000230538 MAIP1Q8WWC4 291 aa12.78□□□□□ -0.36
LAMA4-201ENST00000230538 STAMQ92783 540 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms