RNA–Protein interactions for RNA: ENST00000228955.11

GTF2H3-201, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 2 BASIC

Gene GTF2H3, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-201ENST00000228955 EMILIN3Q9NT22 766 aa8.3□□□□□ -1.08
GTF2H3-201ENST00000228955 HERC5Q9UII4 1024 aaKnown RBP8.3□□□□□ -1.08
GTF2H3-201ENST00000228955 PCDHB15Q9Y5E8 787 aa8.3□□□□□ -1.08
GTF2H3-201ENST00000228955 MYH1P12882 1939 aa8.3□□□□□ -1.08
GTF2H3-201ENST00000228955 MINDY4BA8MYZ0 360 aa8.29□□□□□ -1.08
GTF2H3-201ENST00000228955 USP17L10C9JJH3 530 aa8.29□□□□□ -1.08
GTF2H3-201ENST00000228955 SHMT1P34896 483 aa8.29□□□□□ -1.08
GTF2H3-201ENST00000228955 BACE1P56817 501 aa8.29□□□□□ -1.08
GTF2H3-201ENST00000228955 IRX6P78412 446 aaPredicted RBP8.29□□□□□ -1.08
GTF2H3-201ENST00000228955 FOXP4Q8IVH2 680 aaPredicted RBP8.29□□□□□ -1.08
GTF2H3-201ENST00000228955 COA7Q96BR5 231 aa8.29□□□□□ -1.08
GTF2H3-201ENST00000228955 SHISA4Q96DD7 197 aa8.29□□□□□ -1.08
GTF2H3-201ENST00000228955 PORCNQ9H237 461 aa8.29□□□□□ -1.08
GTF2H3-201ENST00000228955 SERPINB13Q9UIV8 391 aa8.29□□□□□ -1.08
GTF2H3-201ENST00000228955 SLC4A4Q9Y6R1 1079 aa8.29□□□□□ -1.08
GTF2H3-201ENST00000228955 DOCK3Q8IZD9 2030 aa8.28□□□□□ -1.08
GTF2H3-201ENST00000228955 PDE4DIPQ5VU43 2346 aa8.28□□□□□ -1.08
GTF2H3-201ENST00000228955 TCRBV5S4A2TA0A5A2 114 aa8.28□□□□□ -1.08
GTF2H3-201ENST00000228955 H0YGN5 161 aa8.28□□□□□ -1.08
GTF2H3-201ENST00000228955 RAB11FIP3O75154 756 aa8.28□□□□□ -1.08
GTF2H3-201ENST00000228955 APPP05067 770 aa8.28□□□□□ -1.08
GTF2H3-201ENST00000228955 ASNSP08243 561 aa8.28□□□□□ -1.08
GTF2H3-201ENST00000228955 AKR1B1P15121 316 aa8.28□□□□□ -1.08
GTF2H3-201ENST00000228955 GUCY1A2P33402 732 aa8.28□□□□□ -1.08
GTF2H3-201ENST00000228955 HERVK_113P62684 666 aa8.28□□□□□ -1.08
GTF2H3-201ENST00000228955 PLS1Q14651 629 aa8.28□□□□□ -1.08
GTF2H3-201ENST00000228955 TTF1Q15361 905 aaPredicted RBP8.28□□□□□ -1.08
GTF2H3-201ENST00000228955 CCL14Q16627 93 aa8.28□□□□□ -1.08
GTF2H3-201ENST00000228955 KIAA1755Q5JYT7 1200 aa8.28□□□□□ -1.08
GTF2H3-201ENST00000228955 ANO1Q5XXA6 986 aa8.28□□□□□ -1.08
GTF2H3-201ENST00000228955 POTEEQ6S8J3 1075 aa8.28□□□□□ -1.08
GTF2H3-201ENST00000228955 DIS3LQ8TF46 1054 aaKnown RBP8.28□□□□□ -1.08
GTF2H3-201ENST00000228955 ZNF512BQ96KM6 892 aaPredicted RBP8.28□□□□□ -1.08
GTF2H3-201ENST00000228955 TANGO6Q9C0B7 1094 aa8.28□□□□□ -1.08
GTF2H3-201ENST00000228955 PUS7LQ9H0K6 701 aaKnown RBP8.28□□□□□ -1.08
GTF2H3-201ENST00000228955 CABP5Q9NP86 173 aa8.28□□□□□ -1.08
GTF2H3-201ENST00000228955 DCP1AQ9NPI6 582 aaPredicted RBP8.28□□□□□ -1.08
GTF2H3-201ENST00000228955 PNMA3Q9UL41 463 aa8.28□□□□□ -1.08
GTF2H3-201ENST00000228955 ISY1Q9ULR0 285 aaKnown RBP8.28□□□□□ -1.08
GTF2H3-201ENST00000228955 MTMR7Q9Y216 660 aa8.28□□□□□ -1.08
GTF2H3-201ENST00000228955 PTPRFP10586 1907 aa8.28□□□□□ -1.08
GTF2H3-201ENST00000228955 MAST2Q6P0Q8 1798 aa8.28□□□□□ -1.08
GTF2H3-201ENST00000228955 A0A1W2PRG0 241 aa8.27□□□□□ -1.09
GTF2H3-201ENST00000228955 USP17L12C9JPN9 530 aa8.27□□□□□ -1.09
GTF2H3-201ENST00000228955 USP17L21D6R901 530 aa8.27□□□□□ -1.09
GTF2H3-201ENST00000228955 PRDM1O75626 825 aa8.27□□□□□ -1.09
GTF2H3-201ENST00000228955 ATP5JP18859 108 aa8.27□□□□□ -1.09
GTF2H3-201ENST00000228955 ADD2P35612 726 aa8.27□□□□□ -1.09
GTF2H3-201ENST00000228955 UBXN2AP68543 259 aa8.27□□□□□ -1.09
GTF2H3-201ENST00000228955 PRPF38BQ5VTL8 546 aaKnown RBP8.27□□□□□ -1.09
GTF2H3-201ENST00000228955 B4GALNT3Q6L9W6 998 aa8.27□□□□□ -1.09
GTF2H3-201ENST00000228955 USP17L2Q6R6M4 530 aa8.27□□□□□ -1.09
GTF2H3-201ENST00000228955 CCDC129Q6ZRS4 1044 aa8.27□□□□□ -1.09
GTF2H3-201ENST00000228955 TTC6Q86TZ1 520 aa8.27□□□□□ -1.09
GTF2H3-201ENST00000228955 PROCA1Q8NCQ7 364 aaPredicted RBP8.27□□□□□ -1.09
GTF2H3-201ENST00000228955 SEC62Q99442 399 aaKnown RBP8.27□□□□□ -1.09
GTF2H3-201ENST00000228955 HAUS7Q99871 368 aa8.27□□□□□ -1.09
GTF2H3-201ENST00000228955 RPAP3Q9H6T3 665 aaPredicted RBP8.27□□□□□ -1.09
GTF2H3-201ENST00000228955 ZCCHC17Q9NP64 241 aaKnown RBP8.27□□□□□ -1.09
GTF2H3-201ENST00000228955 RBPJLQ9UBG7 517 aa8.27□□□□□ -1.09
GTF2H3-201ENST00000228955 LAMB1P07942 1786 aa8.27□□□□□ -1.09
GTF2H3-201ENST00000228955 MGAMO43451 1857 aa8.27□□□□□ -1.09
GTF2H3-201ENST00000228955 BAZ2AQ9UIF9 1905 aaKnown RBP8.27□□□□□ -1.09
GTF2H3-201ENST00000228955 M0R2C6 588 aa8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 CNGA1P29973 690 aa8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 PABPC4Q13310 644 aaKnown RBP eCLIP8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 ANKRD45Q5TZF3 282 aa8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 GPRC5AQ8NFJ5 357 aa8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 U2AF1L4Q8WU68 220 aaKnown RBP8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 MS4A3Q96HJ5 214 aa8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 NUP88Q99567 741 aaPredicted RBP8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 WDR18Q9BV38 432 aa8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 INCENPQ9NQS7 918 aa8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 CIZ1Q9ULV3 898 aaPredicted RBP8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 MAP3K13O43283 966 aa8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 FARP2O94887 1054 aaPredicted RBP8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 SYN1P17600 705 aa8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 VCAM1P19320 739 aa8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 RRP1P56182 461 aaKnown RBP8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 ERVK-9P63128 1117 aa8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 ERVK-24P63145 666 aa8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 PDE3AQ14432 1141 aa8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 FAM110CQ1W6H9 321 aa8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 TATDN1Q6P1N9 297 aa8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 SLAIN1Q8ND83 568 aa8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 TRIB2Q92519 343 aa8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 KIF12Q96FN5 646 aa8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 PAWRQ96IZ0 340 aaKnown RBP8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.26□□□□□ -1.096e-6■■■□□ 19.2
GTF2H3-201ENST00000228955 ECHDC1Q9NTX5 307 aa8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 BTBD7Q9P203 1132 aa8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 ZMYND8Q9ULU4 1186 aaPredicted RBP8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 COLQQ9Y215 455 aaPredicted RBP8.26□□□□□ -1.09
GTF2H3-201ENST00000228955 NAV1Q8NEY1 1877 aa8.25□□□□□ -1.09
GTF2H3-201ENST00000228955 USP17L15C9J2P7 530 aa8.25□□□□□ -1.09
GTF2H3-201ENST00000228955 C19orf81C9J6K1 198 aa8.25□□□□□ -1.09
GTF2H3-201ENST00000228955 USP17L13C9JLJ4 530 aa8.25□□□□□ -1.09
GTF2H3-201ENST00000228955 USP17L11C9JVI0 530 aa8.25□□□□□ -1.09
GTF2H3-201ENST00000228955 USP17L18D6R9N7 530 aa8.25□□□□□ -1.09
GTF2H3-201ENST00000228955 USP17L22D6RA61 530 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms