RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 SWAP70Q9UH65 585 aa17.1■□□□□ 0.33
GPN3-201ENST00000228827 ADCY3O60266 1144 aa17.09■□□□□ 0.33
GPN3-201ENST00000228827 AKR1B1P15121 316 aa17.09■□□□□ 0.33
GPN3-201ENST00000228827 ELNP15502 786 aa17.09■□□□□ 0.33
GPN3-201ENST00000228827 CTR9Q6PD62 1173 aa17.09■□□□□ 0.33
GPN3-201ENST00000228827 APPBP2Q92624 585 aa17.09■□□□□ 0.33
GPN3-201ENST00000228827 PAGR1Q9BTK6 254 aa17.09■□□□□ 0.33
GPN3-201ENST00000228827 KIAA1683Q9H0B3 1180 aa17.09■□□□□ 0.33
GPN3-201ENST00000228827 TNRC18O15417 2968 aaPredicted RBP17.08■□□□□ 0.33
GPN3-201ENST00000228827 M0R2C6 588 aa17.08■□□□□ 0.32
GPN3-201ENST00000228827 GLRX3O76003 335 aaKnown RBP17.08■□□□□ 0.32
GPN3-201ENST00000228827 CDK8P49336 464 aa17.08■□□□□ 0.32
GPN3-201ENST00000228827 HDAC1Q13547 482 aaPredicted RBP17.08■□□□□ 0.32
GPN3-201ENST00000228827 CLEC10AQ8IUN9 316 aa17.08■□□□□ 0.32
GPN3-201ENST00000228827 STK11IPQ8N1F8 1099 aa17.08■□□□□ 0.32
GPN3-201ENST00000228827 SLAIN1Q8ND83 568 aa17.08■□□□□ 0.32
GPN3-201ENST00000228827 C12orf42Q96LP6 360 aa17.08■□□□□ 0.32
GPN3-201ENST00000228827 FSD1Q9BTV5 496 aa17.08■□□□□ 0.32
GPN3-201ENST00000228827 TXNRD2Q9NNW7 524 aa17.08■□□□□ 0.32
GPN3-201ENST00000228827 MORF4L1Q9UBU8 362 aa17.08■□□□□ 0.32
GPN3-201ENST00000228827 A0A1W2PRG0 241 aa17.07■□□□□ 0.32
GPN3-201ENST00000228827 USP17L15C9J2P7 530 aa17.07■□□□□ 0.32
GPN3-201ENST00000228827 USP17L13C9JLJ4 530 aa17.07■□□□□ 0.32
GPN3-201ENST00000228827 USP17L11C9JVI0 530 aa17.07■□□□□ 0.32
GPN3-201ENST00000228827 USP17L18D6R9N7 530 aa17.07■□□□□ 0.32
GPN3-201ENST00000228827 USP17L22D6RA61 530 aa17.07■□□□□ 0.32
GPN3-201ENST00000228827 USP17L17D6RBQ6 530 aa17.07■□□□□ 0.32
GPN3-201ENST00000228827 USP17L19D6RCP7 530 aa17.07■□□□□ 0.32
GPN3-201ENST00000228827 USP17L20D6RJB6 530 aa17.07■□□□□ 0.32
GPN3-201ENST00000228827 ZFYP08048 801 aaPredicted RBP17.07■□□□□ 0.32
GPN3-201ENST00000228827 VCAM1P19320 739 aa17.07■□□□□ 0.32
GPN3-201ENST00000228827 USP17L24Q0WX57 530 aa17.07■□□□□ 0.32
GPN3-201ENST00000228827 TMEM179Q6ZVK1 233 aa17.07■□□□□ 0.32
GPN3-201ENST00000228827 GPRC5AQ8NFJ5 357 aa17.07■□□□□ 0.32
GPN3-201ENST00000228827 GCC1Q96CN9 775 aa17.07■□□□□ 0.32
GPN3-201ENST00000228827 RBPJLQ9UBG7 517 aa17.07■□□□□ 0.32
GPN3-201ENST00000228827 GSG1L2A8MUP6 293 aa17.06■□□□□ 0.32
GPN3-201ENST00000228827 GPAA1O43292 621 aa17.06■□□□□ 0.32
GPN3-201ENST00000228827 CCL5P13501 91 aa17.06■□□□□ 0.32
GPN3-201ENST00000228827 UBXN2AP68543 259 aa17.06■□□□□ 0.32
GPN3-201ENST00000228827 CATSPERGQ6ZRH7 1159 aa17.06■□□□□ 0.32
GPN3-201ENST00000228827 C16orf86Q6ZW13 317 aa17.06■□□□□ 0.32
GPN3-201ENST00000228827 EXOC6Q8TAG9 804 aa17.06■□□□□ 0.32
GPN3-201ENST00000228827 SEC62Q99442 399 aaKnown RBP17.06■□□□□ 0.32
GPN3-201ENST00000228827 RPAP3Q9H6T3 665 aaPredicted RBP17.06■□□□□ 0.32
GPN3-201ENST00000228827 ARPP21Q9UBL0 812 aaPredicted RBP17.06■□□□□ 0.32
GPN3-201ENST00000228827 CENPFP49454 3210 aa17.06■□□□□ 0.32
GPN3-201ENST00000228827 SALL3Q9BXA9 1300 aa17.06■□□□□ 0.32
GPN3-201ENST00000228827 INHAP05111 366 aa17.05■□□□□ 0.32
GPN3-201ENST00000228827 LRRFIP1Q32MZ4 808 aaKnown RBP17.05■□□□□ 0.32
GPN3-201ENST00000228827 Q3C1V9 767 aa17.05■□□□□ 0.32
GPN3-201ENST00000228827 POTEEQ6S8J3 1075 aa17.05■□□□□ 0.32
GPN3-201ENST00000228827 RNF208Q9H0X6 261 aa17.05■□□□□ 0.32
GPN3-201ENST00000228827 MINDY4BA8MYZ0 360 aa17.05■□□□□ 0.32
GPN3-201ENST00000228827 APPP05067 770 aa17.05■□□□□ 0.32
GPN3-201ENST00000228827 ERVK-9P63128 1117 aa17.05■□□□□ 0.32
GPN3-201ENST00000228827 ERVK-24P63145 666 aa17.05■□□□□ 0.32
GPN3-201ENST00000228827 ICA1Q05084 483 aa17.05■□□□□ 0.32
GPN3-201ENST00000228827 IRF5Q13568 498 aa17.05■□□□□ 0.32
GPN3-201ENST00000228827 CCAR1Q8IX12 1150 aaKnown RBP17.05■□□□□ 0.32
GPN3-201ENST00000228827 GTF3C2Q8WUA4 911 aaPredicted RBP17.05■□□□□ 0.32
GPN3-201ENST00000228827 UNC93B1Q9H1C4 597 aa17.05■□□□□ 0.32
GPN3-201ENST00000228827 EPB41L4AQ9HCS5 686 aaPredicted RBP17.05■□□□□ 0.32
GPN3-201ENST00000228827 CNMDO75829 334 aa17.04■□□□□ 0.32
GPN3-201ENST00000228827 TDO2P48775 406 aa17.04■□□□□ 0.32
GPN3-201ENST00000228827 ATP2B2Q01814 1243 aa17.04■□□□□ 0.32
GPN3-201ENST00000228827 KIAA1755Q5JYT7 1200 aa17.04■□□□□ 0.32
GPN3-201ENST00000228827 B4GALNT3Q6L9W6 998 aa17.04■□□□□ 0.32
GPN3-201ENST00000228827 PXYLP1Q8TE99 480 aa17.04■□□□□ 0.32
GPN3-201ENST00000228827 CCDC17Q96LX7 622 aa17.04■□□□□ 0.32
GPN3-201ENST00000228827 PORCNQ9H237 461 aa17.04■□□□□ 0.32
GPN3-201ENST00000228827 GJD2Q9UKL4 321 aa17.04■□□□□ 0.32
GPN3-201ENST00000228827 GNAT2P19087 354 aa17.03■□□□□ 0.32
GPN3-201ENST00000228827 CYP2B6P20813 491 aa17.03■□□□□ 0.32
GPN3-201ENST00000228827 AAMPQ13685 434 aa17.03■□□□□ 0.32
GPN3-201ENST00000228827 SBK1Q52WX2 424 aa17.03■□□□□ 0.32
GPN3-201ENST00000228827 GIMAP6Q6P9H5 292 aa17.03■□□□□ 0.32
GPN3-201ENST00000228827 SIAH1Q8IUQ4 282 aa17.03■□□□□ 0.32
GPN3-201ENST00000228827 TANGO6Q9C0B7 1094 aa17.03■□□□□ 0.32
GPN3-201ENST00000228827 LNPKQ9C0E8 428 aa17.03■□□□□ 0.32
GPN3-201ENST00000228827 RWDD1Q9H446 243 aaPredicted RBP17.03■□□□□ 0.32
GPN3-201ENST00000228827 ARHGEF10LQ9HCE6 1279 aa17.03■□□□□ 0.32
GPN3-201ENST00000228827 CWC22Q9HCG8 908 aaKnown RBP17.03■□□□□ 0.32
GPN3-201ENST00000228827 SUPT16HQ9Y5B9 1047 aaKnown RBP17.03■□□□□ 0.32
GPN3-201ENST00000228827 PATL2C9JE40 543 aaKnown RBP17.02■□□□□ 0.32
GPN3-201ENST00000228827 MAPK4P31152 587 aa17.02■□□□□ 0.32
GPN3-201ENST00000228827 PDE1AP54750 535 aa17.02■□□□□ 0.32
GPN3-201ENST00000228827 ZMYM1Q5SVZ6 1142 aa17.02■□□□□ 0.32
GPN3-201ENST00000228827 SPICE1Q8N0Z3 855 aa17.02■□□□□ 0.32
GPN3-201ENST00000228827 SHISA4Q96DD7 197 aa17.02■□□□□ 0.32
GPN3-201ENST00000228827 RABGAP1Q9Y3P9 1069 aa17.02■□□□□ 0.32
GPN3-201ENST00000228827 SPDYE16A6NNV3 312 aaPredicted RBP17.01■□□□□ 0.31
GPN3-201ENST00000228827 IGHDP01880 384 aa17.01■□□□□ 0.31
GPN3-201ENST00000228827 GJB1P08034 283 aa17.01■□□□□ 0.31
GPN3-201ENST00000228827 EEF2P13639 858 aaKnown RBP17.01■□□□□ 0.31
GPN3-201ENST00000228827 WDR78Q5VTH9 848 aa17.01■□□□□ 0.31
GPN3-201ENST00000228827 SAMD1Q6SPF0 538 aaPredicted RBP17.01■□□□□ 0.31
GPN3-201ENST00000228827 IFNL3Q8IZI9 196 aa17.01■□□□□ 0.31
GPN3-201ENST00000228827 SH2D4AQ9H788 454 aa17.01■□□□□ 0.31
GPN3-201ENST00000228827 MKNK2Q9HBH9 465 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms