RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 FCHSD1Q86WN1 690 aa25.13■■□□□ 1.61
SMARCD2-201ENST00000225742 NUTM2AQ8IVF1 878 aaPredicted RBP25.13■■□□□ 1.61
SMARCD2-201ENST00000225742 ZNF592Q92610 1267 aa25.13■■□□□ 1.61
SMARCD2-201ENST00000225742 CSRNP2Q9H175 543 aa25.13■■□□□ 1.61
SMARCD2-201ENST00000225742 TRMT1Q9NXH9 659 aaKnown RBP25.13■■□□□ 1.61
SMARCD2-201ENST00000225742 ERCC5P28715 1186 aaPredicted RBP25.12■■□□□ 1.61
SMARCD2-201ENST00000225742 SPECC1Q5M775 1068 aa25.12■■□□□ 1.61
SMARCD2-201ENST00000225742 PPP1R13BQ96KQ4 1090 aa25.12■■□□□ 1.61
SMARCD2-201ENST00000225742 BCL11BQ9C0K0 894 aaPredicted RBP25.12■■□□□ 1.61
SMARCD2-201ENST00000225742 VPS54Q9P1Q0 977 aa25.12■■□□□ 1.61
SMARCD2-201ENST00000225742 V9GY48 417 aaPredicted RBP25.12■■□□□ 1.61
SMARCD2-201ENST00000225742 FOXN1O15353 648 aa25.12■■□□□ 1.61
SMARCD2-201ENST00000225742 PDE4BQ07343 736 aa25.12■■□□□ 1.61
SMARCD2-201ENST00000225742 CTCFLQ8NI51 663 aaPredicted RBP25.12■■□□□ 1.61
SMARCD2-201ENST00000225742 TMX1Q9H3N1 280 aa25.12■■□□□ 1.61
SMARCD2-201ENST00000225742 CYP2D7A0A087X1C5 515 aa25.11■■□□□ 1.61
SMARCD2-201ENST00000225742 WTIPA6NIX2 430 aaPredicted RBP25.11■■□□□ 1.61
SMARCD2-201ENST00000225742 TOP1P11387 765 aaKnown RBP25.11■■□□□ 1.61
SMARCD2-201ENST00000225742 TPTE2Q6XPS3 522 aa25.11■■□□□ 1.61
SMARCD2-201ENST00000225742 BICDL1Q6ZP65 573 aa25.11■■□□□ 1.61
SMARCD2-201ENST00000225742 NBPF5PQ86XG9 351 aaPredicted RBP25.11■■□□□ 1.61
SMARCD2-201ENST00000225742 DPF2Q92785 391 aa25.11■■□□□ 1.61
SMARCD2-201ENST00000225742 TNFRSF25Q93038 417 aa25.11■■□□□ 1.61
SMARCD2-201ENST00000225742 SHISA4Q96DD7 197 aa25.11■■□□□ 1.61
SMARCD2-201ENST00000225742 DCP1AQ9NPI6 582 aaPredicted RBP25.11■■□□□ 1.61
SMARCD2-201ENST00000225742 PLEKHA8P1O95397 391 aa25.1■■□□□ 1.61
SMARCD2-201ENST00000225742 ZNF18P17022 549 aa25.1■■□□□ 1.61
SMARCD2-201ENST00000225742 TRAPPC10P48553 1259 aa25.1■■□□□ 1.61
SMARCD2-201ENST00000225742 CGNQ9P2M7 1197 aaKnown RBP25.1■■□□□ 1.61
SMARCD2-201ENST00000225742 CNTNAP5Q8WYK1 1306 aa25.1■■□□□ 1.61
SMARCD2-201ENST00000225742 PLCD1P51178 756 aa25.09■■□□□ 1.61
SMARCD2-201ENST00000225742 VPS72Q15906 364 aa25.09■■□□□ 1.61
SMARCD2-201ENST00000225742 PYM1Q9BRP8 204 aaKnown RBP25.09■■□□□ 1.61
SMARCD2-201ENST00000225742 ZPR1O75312 459 aa25.09■■□□□ 1.61
SMARCD2-201ENST00000225742 SLFN14P0C7P3 912 aa25.09■■□□□ 1.61
SMARCD2-201ENST00000225742 PRR29P0C7W0 189 aa25.09■■□□□ 1.61
SMARCD2-201ENST00000225742 ERO1AQ96HE7 468 aa25.09■■□□□ 1.61
SMARCD2-201ENST00000225742 SMIM22K7EJ46 135 aa25.08■■□□□ 1.61
SMARCD2-201ENST00000225742 PRDM1O75626 825 aa25.08■■□□□ 1.61
SMARCD2-201ENST00000225742 ATP2B1P20020 1258 aa25.08■■□□□ 1.61
SMARCD2-201ENST00000225742 SH3RF1Q7Z6J0 888 aa25.08■■□□□ 1.61
SMARCD2-201ENST00000225742 TBX2Q13207 712 aaPredicted RBP25.07■■□□□ 1.6
SMARCD2-201ENST00000225742 CCDC178Q5BJE1 867 aa25.07■■□□□ 1.6
SMARCD2-201ENST00000225742 PPP4R3BQ5MIZ7 849 aa25.07■■□□□ 1.6
SMARCD2-201ENST00000225742 KIF5BP33176 963 aa25.07■■□□□ 1.6
SMARCD2-201ENST00000225742 FAM98CQ17RN3 349 aaKnown RBP25.07■■□□□ 1.6
SMARCD2-201ENST00000225742 TTC38Q5R3I4 469 aa25.07■■□□□ 1.6
SMARCD2-201ENST00000225742 NFE2L3Q9Y4A8 694 aa25.07■■□□□ 1.6
SMARCD2-201ENST00000225742 KLRK1P26718 216 aa25.06■■□□□ 1.6
SMARCD2-201ENST00000225742 NPY5RQ15761 445 aa25.06■■□□□ 1.6
SMARCD2-201ENST00000225742 SRBD1Q8N5C6 995 aaKnown RBP25.06■■□□□ 1.6
SMARCD2-201ENST00000225742 FEZ1Q99689 392 aa25.06■■□□□ 1.6
SMARCD2-201ENST00000225742 L2HGDHQ9H9P8 463 aa25.06■■□□□ 1.6
SMARCD2-201ENST00000225742 IRS2Q9Y4H2 1338 aa25.06■■□□□ 1.6
SMARCD2-201ENST00000225742 SLU7O95391 586 aaKnown RBP25.05■■□□□ 1.6
SMARCD2-201ENST00000225742 SCG2P13521 617 aa25.05■■□□□ 1.6
SMARCD2-201ENST00000225742 CDK11BP21127 795 aaKnown RBP25.05■■□□□ 1.6
SMARCD2-201ENST00000225742 ATP2C1P98194 919 aaPredicted RBP25.05■■□□□ 1.6
SMARCD2-201ENST00000225742 ANKS1AQ92625 1134 aa25.05■■□□□ 1.6
SMARCD2-201ENST00000225742 ARHGAP6O43182 974 aa25.05■■□□□ 1.6
SMARCD2-201ENST00000225742 ZSCAN12O43309 604 aa25.05■■□□□ 1.6
SMARCD2-201ENST00000225742 FMR1Q06787 632 aaKnown RBP eCLIP25.05■■□□□ 1.6
SMARCD2-201ENST00000225742 PFKFB3Q16875 520 aaPredicted RBP25.05■■□□□ 1.6
SMARCD2-201ENST00000225742 USP49Q70CQ1 688 aa25.05■■□□□ 1.6
SMARCD2-201ENST00000225742 PDILTQ8N807 584 aa25.05■■□□□ 1.6
SMARCD2-201ENST00000225742 GSDMAQ96QA5 445 aa25.05■■□□□ 1.6
SMARCD2-201ENST00000225742 SH3GLB2Q9NR46 395 aa25.05■■□□□ 1.6
SMARCD2-201ENST00000225742 TFCP2L1Q9NZI6 479 aa25.05■■□□□ 1.6
SMARCD2-201ENST00000225742 FAM205CA6NFA0 338 aa25.04■■□□□ 1.6
SMARCD2-201ENST00000225742 CALML3P27482 149 aa25.04■■□□□ 1.6
SMARCD2-201ENST00000225742 EARS2Q5JPH6 523 aaKnown RBP25.04■■□□□ 1.6
SMARCD2-201ENST00000225742 DHX58Q96C10 678 aa25.04■■□□□ 1.6
SMARCD2-201ENST00000225742 PAGE5Q96GU1 130 aa25.04■■□□□ 1.6
SMARCD2-201ENST00000225742 INTS13Q9NVM9 706 aa25.04■■□□□ 1.6
SMARCD2-201ENST00000225742 BTAF1O14981 1849 aa25.04■■□□□ 1.6
SMARCD2-201ENST00000225742 PHLPP2Q6ZVD8 1323 aa25.04■■□□□ 1.6
SMARCD2-201ENST00000225742 TM4SF1P30408 202 aa25.03■■□□□ 1.6
SMARCD2-201ENST00000225742 DGKHQ86XP1 1220 aa25.03■■□□□ 1.6
SMARCD2-201ENST00000225742 WDR66Q8TBY9 1149 aa25.03■■□□□ 1.6
SMARCD2-201ENST00000225742 SYMPKQ92797 1274 aaKnown RBP25.03■■□□□ 1.6
SMARCD2-201ENST00000225742 SRP68Q9UHB9 627 aaKnown RBP25.03■■□□□ 1.6
SMARCD2-201ENST00000225742 NHSQ6T4R5 1651 aa25.03■■□□□ 1.6
SMARCD2-201ENST00000225742 GOLGA6L9A6NEM1 432 aa25.02■■□□□ 1.6
SMARCD2-201ENST00000225742 TMEM232C9JQI7 657 aa25.02■■□□□ 1.6
SMARCD2-201ENST00000225742 GSTO1P78417 241 aa25.02■■□□□ 1.6
SMARCD2-201ENST00000225742 SPECC1LQ69YQ0 1117 aa25.02■■□□□ 1.6
SMARCD2-201ENST00000225742 DZIP1Q86YF9 867 aaKnown RBP25.02■■□□□ 1.6
SMARCD2-201ENST00000225742 SMAP1Q8IYB5 467 aaPredicted RBP25.02■■□□□ 1.6
SMARCD2-201ENST00000225742 LEMD3Q9Y2U8 911 aa25.02■■□□□ 1.6
SMARCD2-201ENST00000225742 RTCBQ9Y3I0 505 aaKnown RBP25.02■■□□□ 1.6
SMARCD2-201ENST00000225742 TSPY2A6NKD2 308 aa25.02■■□□□ 1.6
SMARCD2-201ENST00000225742 PRDX5P30044 214 aa25.02■■□□□ 1.6
SMARCD2-201ENST00000225742 NLRP5P59047 1200 aa25.02■■□□□ 1.6
SMARCD2-201ENST00000225742 ETF1P62495 437 aaKnown RBP25.02■■□□□ 1.6
SMARCD2-201ENST00000225742 SPATA1Q5VX52 437 aa25.02■■□□□ 1.6
SMARCD2-201ENST00000225742 GRAMD1CQ8IYS0 662 aa25.02■■□□□ 1.6
SMARCD2-201ENST00000225742 FAM177A1Q8N128 213 aaPredicted RBP25.02■■□□□ 1.6
SMARCD2-201ENST00000225742 ZNF215Q9UL58 517 aaPredicted RBP25.02■■□□□ 1.6
SMARCD2-201ENST00000225742 ROBO3Q96MS0 1386 aa25.01■■□□□ 1.59
SMARCD2-201ENST00000225742 GNPATO15228 680 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms