RNA–Protein interactions for RNA: ENST00000224949.8

PITRM1-201, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PITRM1, Length 3,450 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-201ENST00000224949 ERCC5P28715 1186 aaPredicted RBP14.29□□□□□ -0.12
PITRM1-201ENST00000224949 SARSP49591 514 aaKnown RBP14.29□□□□□ -0.12
PITRM1-201ENST00000224949 GTF2A1P52655 376 aaPredicted RBP14.29□□□□□ -0.12
PITRM1-201ENST00000224949 ANKRD20A12PQ8NF67 263 aa14.29□□□□□ -0.12
PITRM1-201ENST00000224949 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.29□□□□□ -0.12
PITRM1-201ENST00000224949 CTAGE1Q96RT6 745 aa14.29□□□□□ -0.12
PITRM1-201ENST00000224949 EIF3CQ99613 913 aaKnown RBP14.29□□□□□ -0.12
PITRM1-201ENST00000224949 UBAC1Q9BSL1 405 aa14.29□□□□□ -0.12
PITRM1-201ENST00000224949 NAA15Q9BXJ9 866 aaKnown RBP14.29□□□□□ -0.12
PITRM1-201ENST00000224949 GREM2Q9H772 168 aa14.29□□□□□ -0.12
PITRM1-201ENST00000224949 PSD3Q9NYI0 1048 aa14.29□□□□□ -0.12
PITRM1-201ENST00000224949 RNF225M0QZC1 329 aaPredicted RBP14.29□□□□□ -0.12
PITRM1-201ENST00000224949 UBXN1Q04323 297 aa14.29□□□□□ -0.12
PITRM1-201ENST00000224949 CTR9Q6PD62 1173 aa14.29□□□□□ -0.12
PITRM1-201ENST00000224949 RASGRP2Q7LDG7 609 aa14.29□□□□□ -0.12
PITRM1-201ENST00000224949 IFNL3Q8IZI9 196 aa14.29□□□□□ -0.12
PITRM1-201ENST00000224949 TRIML1Q8N9V2 468 aa14.29□□□□□ -0.12
PITRM1-201ENST00000224949 PAGE5Q96GU1 130 aa14.29□□□□□ -0.12
PITRM1-201ENST00000224949 IQSEC3Q9UPP2 1182 aaPredicted RBP14.29□□□□□ -0.12
PITRM1-201ENST00000224949 SRPRBQ9Y5M8 271 aaKnown RBP14.29□□□□□ -0.12
PITRM1-201ENST00000224949 IFNAR1P17181 557 aa14.29□□□□□ -0.12
PITRM1-201ENST00000224949 MRPS25P82663 173 aaKnown RBP14.29□□□□□ -0.12
PITRM1-201ENST00000224949 KRT31Q15323 416 aa14.29□□□□□ -0.12
PITRM1-201ENST00000224949 DNAJC21Q5F1R6 531 aaKnown RBP14.29□□□□□ -0.12
PITRM1-201ENST00000224949 FAM71BQ8TC56 605 aa14.29□□□□□ -0.12
PITRM1-201ENST00000224949 AFAP1L1Q8TED9 768 aa14.29□□□□□ -0.12
PITRM1-201ENST00000224949 PCMTD1Q96MG8 357 aaPredicted RBP14.29□□□□□ -0.12
PITRM1-201ENST00000224949 TSR1Q2NL82 804 aaKnown RBP14.28□□□□□ -0.12
PITRM1-201ENST00000224949 KIAA1328Q86T90 577 aa14.28□□□□□ -0.12
PITRM1-201ENST00000224949 MSANTD4Q8NCY6 345 aa14.28□□□□□ -0.12
PITRM1-201ENST00000224949 HNRNPLLQ8WVV9 542 aaKnown RBP14.28□□□□□ -0.12
PITRM1-201ENST00000224949 DRC1Q96MC2 740 aa14.28□□□□□ -0.12
PITRM1-201ENST00000224949 CRACR2AQ9BSW2 395 aa14.28□□□□□ -0.12
PITRM1-201ENST00000224949 ABHD10Q9NUJ1 306 aa14.28□□□□□ -0.12
PITRM1-201ENST00000224949 DEXIO95424 95 aa14.28□□□□□ -0.12
PITRM1-201ENST00000224949 TMTC1Q8IUR5 882 aa14.28□□□□□ -0.12
PITRM1-201ENST00000224949 RAB21Q9UL25 225 aa14.28□□□□□ -0.12
PITRM1-201ENST00000224949 A0A0G2JS52 829 aa14.28□□□□□ -0.12
PITRM1-201ENST00000224949 DPYDQ12882 1025 aa14.28□□□□□ -0.12
PITRM1-201ENST00000224949 TTF1Q15361 905 aaPredicted RBP14.28□□□□□ -0.12
PITRM1-201ENST00000224949 WHAMMP3Q1A5X7 153 aa14.28□□□□□ -0.12
PITRM1-201ENST00000224949 CCDC122Q5T0U0 273 aa14.28□□□□□ -0.12
PITRM1-201ENST00000224949 LRRC31Q6UY01 552 aa14.28□□□□□ -0.12
PITRM1-201ENST00000224949 CYP26C1Q6V0L0 522 aa14.28□□□□□ -0.12
PITRM1-201ENST00000224949 STRBPQ96SI9 672 aaKnown RBP14.28□□□□□ -0.12
PITRM1-201ENST00000224949 EPB41L4AQ9HCS5 686 aaPredicted RBP14.28□□□□□ -0.12
PITRM1-201ENST00000224949 SLC4A4Q9Y6R1 1079 aa14.28□□□□□ -0.12
PITRM1-201ENST00000224949 MATR3P43243 847 aaKnown RBP eCLIP14.27□□□□□ -0.12
PITRM1-201ENST00000224949 EARS2Q5JPH6 523 aaKnown RBP14.27□□□□□ -0.12
PITRM1-201ENST00000224949 AKNAD1Q5T1N1 836 aa14.27□□□□□ -0.12
PITRM1-201ENST00000224949 TTC19Q6DKK2 380 aaPredicted RBP14.27□□□□□ -0.12
PITRM1-201ENST00000224949 MICALL1Q8N3F8 863 aa14.27□□□□□ -0.12
PITRM1-201ENST00000224949 WDR19Q8NEZ3 1342 aa14.27□□□□□ -0.12
PITRM1-201ENST00000224949 KIF6Q6ZMV9 814 aa14.27□□□□□ -0.13
PITRM1-201ENST00000224949 FOXP1Q9H334 677 aaPredicted RBP14.27□□□□□ -0.13
PITRM1-201ENST00000224949 NWD2Q9ULI1 1742 aa14.27□□□□□ -0.13
PITRM1-201ENST00000224949 BAZ2BQ9UIF8 2168 aaKnown RBP14.27□□□□□ -0.13
PITRM1-201ENST00000224949 APTXQ7Z2E3 356 aaKnown RBP14.27□□□□□ -0.13
PITRM1-201ENST00000224949 PROSER2Q86WR7 435 aaPredicted RBP14.27□□□□□ -0.13
PITRM1-201ENST00000224949 PLIN2Q99541 437 aa14.27□□□□□ -0.13
PITRM1-201ENST00000224949 JADE2Q9NQC1 790 aa14.27□□□□□ -0.13
PITRM1-201ENST00000224949 ANKRD18BA2A2Z9 1011 aa14.26□□□□□ -0.13
PITRM1-201ENST00000224949 XBP1P17861 261 aa14.26□□□□□ -0.13
PITRM1-201ENST00000224949 USP5P45974 858 aa14.26□□□□□ -0.13
PITRM1-201ENST00000224949 TCIRG1Q13488 830 aa14.26□□□□□ -0.13
PITRM1-201ENST00000224949 NT5DC1Q5TFE4 455 aa14.26□□□□□ -0.13
PITRM1-201ENST00000224949 PACS2Q86VP3 889 aa14.26□□□□□ -0.13
PITRM1-201ENST00000224949 SGMS1Q86VZ5 419 aa14.26□□□□□ -0.13
PITRM1-201ENST00000224949 ZNF654Q8IZM8 581 aa14.26□□□□□ -0.13
PITRM1-201ENST00000224949 CRACR2BQ8N4Y2 399 aaPredicted RBP14.26□□□□□ -0.13
PITRM1-201ENST00000224949 STRN4Q9NRL3 753 aa14.26□□□□□ -0.13
PITRM1-201ENST00000224949 GNL3LQ9NVN8 582 aaKnown RBP14.26□□□□□ -0.13
PITRM1-201ENST00000224949 V9GY48 417 aaPredicted RBP14.26□□□□□ -0.13
PITRM1-201ENST00000224949 WNT7AO00755 349 aa14.26□□□□□ -0.13
PITRM1-201ENST00000224949 COPB1P53618 953 aaKnown RBP14.26□□□□□ -0.13
PITRM1-201ENST00000224949 TOM1L2Q6ZVM7 507 aa14.26□□□□□ -0.13
PITRM1-201ENST00000224949 FANCBQ8NB91 859 aa14.26□□□□□ -0.13
PITRM1-201ENST00000224949 MMS19Q96T76 1030 aa14.26□□□□□ -0.13
PITRM1-201ENST00000224949 ATG3Q9NT62 314 aa14.26□□□□□ -0.13
PITRM1-201ENST00000224949 TACC3Q9Y6A5 838 aa14.26□□□□□ -0.13
PITRM1-201ENST00000224949 KAT6BQ8WYB5 2073 aa14.26□□□□□ -0.13
PITRM1-201ENST00000224949 MACROD2A1Z1Q3 448 aa14.25□□□□□ -0.13
PITRM1-201ENST00000224949 ATP1A1P05023 1023 aaKnown RBP14.25□□□□□ -0.13
PITRM1-201ENST00000224949 IRX3P78415 501 aaPredicted RBP14.25□□□□□ -0.13
PITRM1-201ENST00000224949 PSMB7Q99436 277 aa14.25□□□□□ -0.13
PITRM1-201ENST00000224949 KRT23Q9C075 422 aa14.25□□□□□ -0.13
PITRM1-201ENST00000224949 EPN1Q9Y6I3 576 aaPredicted RBP14.25□□□□□ -0.13
PITRM1-201ENST00000224949 ARHGAP23Q9P227 1491 aa14.25□□□□□ -0.13
PITRM1-201ENST00000224949 KCNJ18B7U540 433 aa14.25□□□□□ -0.13
PITRM1-201ENST00000224949 MCM7P33993 719 aa14.25□□□□□ -0.13
PITRM1-201ENST00000224949 LIFRP42702 1097 aa14.25□□□□□ -0.13
PITRM1-201ENST00000224949 MAP3K12Q12852 859 aa14.25□□□□□ -0.13
PITRM1-201ENST00000224949 STIM1Q13586 685 aa14.25□□□□□ -0.13
PITRM1-201ENST00000224949 CUL4BQ13620 913 aa14.25□□□□□ -0.13
PITRM1-201ENST00000224949 KCNJ12Q14500 433 aa14.25□□□□□ -0.13
PITRM1-201ENST00000224949 NELFBQ8WX92 580 aa14.25□□□□□ -0.13
PITRM1-201ENST00000224949 GDAQ9Y2T3 454 aa14.25□□□□□ -0.13
PITRM1-201ENST00000224949 CCDC196A0A1B0GTZ2 297 aa14.25□□□□□ -0.13
PITRM1-201ENST00000224949 TRIM49BA6NDI0 452 aa14.25□□□□□ -0.13
PITRM1-201ENST00000224949 PPP1R3GB7ZBB8 358 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms