RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 PSDA5PKW4 1024 aaPredicted RBP16.68■□□□□ 0.26
CNOT3-201ENST00000221232 USP17L8P0C7I0 530 aa16.68■□□□□ 0.26
CNOT3-201ENST00000221232 FUT2Q10981 343 aa16.68■□□□□ 0.26
CNOT3-201ENST00000221232 NSUN4Q96CB9 384 aaKnown RBP16.68■□□□□ 0.26
CNOT3-201ENST00000221232 GPR101Q96P66 508 aaPredicted RBP16.68■□□□□ 0.26
CNOT3-201ENST00000221232 PHF20Q9BVI0 1012 aa16.68■□□□□ 0.26
CNOT3-201ENST00000221232 MAPK8IP1Q9UQF2 711 aa16.68■□□□□ 0.26
CNOT3-201ENST00000221232 TAF1P21675 1872 aa16.68■□□□□ 0.26
CNOT3-201ENST00000221232 ZNF804BA4D1E1 1349 aa16.68■□□□□ 0.26
CNOT3-201ENST00000221232 TSPY2A6NKD2 308 aa16.68■□□□□ 0.26
CNOT3-201ENST00000221232 FANCGO15287 622 aa16.68■□□□□ 0.26
CNOT3-201ENST00000221232 ZSCAN20P17040 1043 aaPredicted RBP16.68■□□□□ 0.26
CNOT3-201ENST00000221232 HIBADHP31937 336 aaKnown RBP16.68■□□□□ 0.26
CNOT3-201ENST00000221232 TOGARAM2Q6ZUX3 1019 aa16.68■□□□□ 0.26
CNOT3-201ENST00000221232 NBPF5PQ86XG9 351 aaPredicted RBP16.68■□□□□ 0.26
CNOT3-201ENST00000221232 RASGRP4Q8TDF6 673 aa16.68■□□□□ 0.26
CNOT3-201ENST00000221232 ERO1AQ96HE7 468 aa16.68■□□□□ 0.26
CNOT3-201ENST00000221232 EPC1Q9H2F5 836 aa16.68■□□□□ 0.26
CNOT3-201ENST00000221232 MCM9Q9NXL9 1143 aa16.68■□□□□ 0.26
CNOT3-201ENST00000221232 RTL9Q8NET4 1388 aa16.68■□□□□ 0.26
CNOT3-201ENST00000221232 SARSP49591 514 aaKnown RBP16.67■□□□□ 0.26
CNOT3-201ENST00000221232 MTF1Q14872 753 aa16.67■□□□□ 0.26
CNOT3-201ENST00000221232 KARSQ15046 597 aaKnown RBP16.67■□□□□ 0.26
CNOT3-201ENST00000221232 SMAP1Q8IYB5 467 aaPredicted RBP16.67■□□□□ 0.26
CNOT3-201ENST00000221232 MLKLQ8NB16 471 aa16.67■□□□□ 0.26
CNOT3-201ENST00000221232 CTCFLQ8NI51 663 aaPredicted RBP16.67■□□□□ 0.26
CNOT3-201ENST00000221232 DYNLL2Q96FJ2 89 aa16.67■□□□□ 0.26
CNOT3-201ENST00000221232 PAGE5Q96GU1 130 aa16.67■□□□□ 0.26
CNOT3-201ENST00000221232 BAG1Q99933 345 aaPredicted RBP16.67■□□□□ 0.26
CNOT3-201ENST00000221232 PRPF3O43395 683 aaKnown RBP16.67■□□□□ 0.26
CNOT3-201ENST00000221232 ETF1P62495 437 aaKnown RBP16.67■□□□□ 0.26
CNOT3-201ENST00000221232 GPKOWQ92917 476 aaPredicted RBP eCLIP16.67■□□□□ 0.262e-6■■■□□ 15.9
CNOT3-201ENST00000221232 DCP1AQ9NPI6 582 aaPredicted RBP16.67■□□□□ 0.26
CNOT3-201ENST00000221232 ANAPC4Q9UJX5 808 aa16.67■□□□□ 0.26
CNOT3-201ENST00000221232 TTC38Q5R3I4 469 aa16.67■□□□□ 0.26
CNOT3-201ENST00000221232 REXO1L1PQ8IX06 675 aa16.67■□□□□ 0.26
CNOT3-201ENST00000221232 NLRP3Q96P20 1036 aa16.67■□□□□ 0.26
CNOT3-201ENST00000221232 SETDB2Q96T68 719 aa16.67■□□□□ 0.26
CNOT3-201ENST00000221232 PLIN2Q99541 437 aa16.67■□□□□ 0.26
CNOT3-201ENST00000221232 SF3B3Q15393 1217 aaKnown RBP16.66■□□□□ 0.26
CNOT3-201ENST00000221232 ZBTB9Q96C00 473 aa16.66■□□□□ 0.26
CNOT3-201ENST00000221232 PPP2R2CQ9Y2T4 447 aa16.66■□□□□ 0.26
CNOT3-201ENST00000221232 SPECC1LQ69YQ0 1117 aa16.66■□□□□ 0.26
CNOT3-201ENST00000221232 TRIM65Q6PJ69 517 aa16.66■□□□□ 0.26
CNOT3-201ENST00000221232 ENOX1Q8TC92 643 aaKnown RBP16.66■□□□□ 0.26
CNOT3-201ENST00000221232 IRX2Q9BZI1 471 aaPredicted RBP16.66■□□□□ 0.26
CNOT3-201ENST00000221232 MYH14Q7Z406 1995 aaKnown RBP16.65■□□□□ 0.26
CNOT3-201ENST00000221232 KIF2AO00139 706 aaPredicted RBP16.65■□□□□ 0.26
CNOT3-201ENST00000221232 GNG11P61952 73 aa16.65■□□□□ 0.26
CNOT3-201ENST00000221232 TMTC3Q6ZXV5 915 aa16.65■□□□□ 0.26
CNOT3-201ENST00000221232 AMIGO3Q86WK7 504 aa16.65■□□□□ 0.26
CNOT3-201ENST00000221232 ZNF579Q8NAF0 562 aaKnown RBP16.65■□□□□ 0.26
CNOT3-201ENST00000221232 CDCA7Q9BWT1 371 aaPredicted RBP16.65■□□□□ 0.26
CNOT3-201ENST00000221232 BRIP1Q9BX63 1249 aa16.65■□□□□ 0.26
CNOT3-201ENST00000221232 BRMS1Q9HCU9 246 aa16.65■□□□□ 0.26
CNOT3-201ENST00000221232 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.65■□□□□ 0.261e-6■■□□□ 11.7
CNOT3-201ENST00000221232 A0A0U1RQJ8 604 aa16.65■□□□□ 0.26
CNOT3-201ENST00000221232 GNPATO15228 680 aa16.65■□□□□ 0.26
CNOT3-201ENST00000221232 CCT6AP40227 531 aaKnown RBP16.65■□□□□ 0.26
CNOT3-201ENST00000221232 SYCP1Q15431 976 aa16.65■□□□□ 0.26
CNOT3-201ENST00000221232 FBXO33Q7Z6M2 555 aa16.65■□□□□ 0.26
CNOT3-201ENST00000221232 TC2NQ8N9U0 490 aa16.65■□□□□ 0.26
CNOT3-201ENST00000221232 RGS22Q8NE09 1264 aa16.65■□□□□ 0.26
CNOT3-201ENST00000221232 ATRIPQ8WXE1 791 aa16.65■□□□□ 0.26
CNOT3-201ENST00000221232 CARD6Q9BX69 1037 aa16.65■□□□□ 0.26
CNOT3-201ENST00000221232 CRNKL1Q9BZJ0 848 aaKnown RBP16.65■□□□□ 0.26
CNOT3-201ENST00000221232 ANKRD36CQ5JPF3 1778 aa16.64■□□□□ 0.26
CNOT3-201ENST00000221232 ZNF18P17022 549 aa16.64■□□□□ 0.25
CNOT3-201ENST00000221232 TFAP4Q01664 338 aa16.64■□□□□ 0.25
CNOT3-201ENST00000221232 NPY5RQ15761 445 aa16.64■□□□□ 0.25
CNOT3-201ENST00000221232 TMEM139Q8IV31 216 aa16.64■□□□□ 0.25
CNOT3-201ENST00000221232 STAG2Q8N3U4 1231 aa16.64■□□□□ 0.25
CNOT3-201ENST00000221232 WDR24Q96S15 920 aa16.64■□□□□ 0.25
CNOT3-201ENST00000221232 DACH1Q9UI36 760 aa16.64■□□□□ 0.25
CNOT3-201ENST00000221232 SLFN14P0C7P3 912 aa16.64■□□□□ 0.25
CNOT3-201ENST00000221232 PLCD1P51178 756 aa16.64■□□□□ 0.25
CNOT3-201ENST00000221232 DIXDC1Q155Q3 683 aa16.64■□□□□ 0.25
CNOT3-201ENST00000221232 ARHGAP29Q52LW3 1261 aa16.64■□□□□ 0.25
CNOT3-201ENST00000221232 CLEC4GQ6UXB4 293 aa16.64■□□□□ 0.25
CNOT3-201ENST00000221232 DZIP1Q86YF9 867 aaKnown RBP16.64■□□□□ 0.25
CNOT3-201ENST00000221232 ZNF397Q8NF99 534 aaPredicted RBP16.64■□□□□ 0.25
CNOT3-201ENST00000221232 SMARCC1Q92922 1105 aaPredicted RBP16.64■□□□□ 0.25
CNOT3-201ENST00000221232 CPVLQ9H3G5 476 aa16.64■□□□□ 0.25
CNOT3-201ENST00000221232 KCND1Q9NSA2 647 aa16.64■□□□□ 0.25
CNOT3-201ENST00000221232 OGFRQ9NZT2 677 aa16.64■□□□□ 0.25
CNOT3-201ENST00000221232 ANKIB1Q9P2G1 1089 aa16.64■□□□□ 0.25
CNOT3-201ENST00000221232 DOT1LQ8TEK3 1739 aa16.64■□□□□ 0.25
CNOT3-201ENST00000221232 USP17L3A6NCW0 530 aa16.63■□□□□ 0.25
CNOT3-201ENST00000221232 USP17L4A6NCW7 530 aa16.63■□□□□ 0.25
CNOT3-201ENST00000221232 SOWAHDA6NJG2 315 aa16.63■□□□□ 0.25
CNOT3-201ENST00000221232 NT5DC1Q5TFE4 455 aa16.63■□□□□ 0.25
CNOT3-201ENST00000221232 KANK3Q6NY19 840 aa16.63■□□□□ 0.25
CNOT3-201ENST00000221232 USP17L1Q7RTZ2 530 aa16.63■□□□□ 0.25
CNOT3-201ENST00000221232 SLC44A5Q8NCS7 719 aa16.63■□□□□ 0.25
CNOT3-201ENST00000221232 CTNND2Q9UQB3 1225 aa16.63■□□□□ 0.25
CNOT3-201ENST00000221232 DDX60Q8IY21 1712 aaKnown RBP16.63■□□□□ 0.25
CNOT3-201ENST00000221232 ZPR1O75312 459 aa16.63■□□□□ 0.25
CNOT3-201ENST00000221232 USP5P45974 858 aa16.63■□□□□ 0.25
CNOT3-201ENST00000221232 DPYDQ12882 1025 aa16.63■□□□□ 0.25
CNOT3-201ENST00000221232 GRIK5Q16478 980 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms