RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 PPATQ06203 517 aa15.5■□□□□ 0.07
TIMP1-201ENST00000218388 SEPT2Q15019 361 aa15.5■□□□□ 0.07
TIMP1-201ENST00000218388 CEP95Q96GE4 821 aa15.5■□□□□ 0.07
TIMP1-201ENST00000218388 TMEM87BQ96K49 555 aa15.5■□□□□ 0.07
TIMP1-201ENST00000218388 SH2D4AQ9H788 454 aa15.5■□□□□ 0.07
TIMP1-201ENST00000218388 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.5■□□□□ 0.07
TIMP1-201ENST00000218388 CYP46A1Q9Y6A2 500 aa15.5■□□□□ 0.07
TIMP1-201ENST00000218388 IGKV6D-41A0A0C4DH26 115 aa15.49■□□□□ 0.07
TIMP1-201ENST00000218388 SPDYE5A6NIY4 337 aa15.49■□□□□ 0.07
TIMP1-201ENST00000218388 PRC1O43663 620 aa15.49■□□□□ 0.07
TIMP1-201ENST00000218388 TTLL1O95922 423 aa15.49■□□□□ 0.07
TIMP1-201ENST00000218388 GUCY1A2P33402 732 aa15.49■□□□□ 0.07
TIMP1-201ENST00000218388 FGD1P98174 961 aa15.49■□□□□ 0.07
TIMP1-201ENST00000218388 RGMBQ6NW40 437 aa15.49■□□□□ 0.07
TIMP1-201ENST00000218388 CYB5R4Q7L1T6 521 aa15.49■□□□□ 0.07
TIMP1-201ENST00000218388 IL27Q8NEV9 243 aa15.49■□□□□ 0.07
TIMP1-201ENST00000218388 CLMNQ96JQ2 1002 aa15.49■□□□□ 0.07
TIMP1-201ENST00000218388 TTC14Q96N46 770 aa15.49■□□□□ 0.07
TIMP1-201ENST00000218388 ZSCAN10Q96SZ4 725 aaPredicted RBP15.49■□□□□ 0.07
TIMP1-201ENST00000218388 FEZ1Q99689 392 aa15.49■□□□□ 0.07
TIMP1-201ENST00000218388 MTMR4Q9NYA4 1195 aa15.49■□□□□ 0.07
TIMP1-201ENST00000218388 NYAP2Q9P242 653 aa15.49■□□□□ 0.07
TIMP1-201ENST00000218388 STX8Q9UNK0 236 aa15.49■□□□□ 0.07
TIMP1-201ENST00000218388 ZHX2Q9Y6X8 837 aa15.49■□□□□ 0.07
TIMP1-201ENST00000218388 MYH4Q9Y623 1939 aa15.49■□□□□ 0.07
TIMP1-201ENST00000218388 TNKSO95271 1327 aa15.48■□□□□ 0.07
TIMP1-201ENST00000218388 IFIT3O14879 490 aaKnown RBP15.48■□□□□ 0.07
TIMP1-201ENST00000218388 RPS6KB1P23443 525 aa15.48■□□□□ 0.07
TIMP1-201ENST00000218388 ZNF157P51786 506 aaPredicted RBP15.48■□□□□ 0.07
TIMP1-201ENST00000218388 JAG1P78504 1218 aa15.48■□□□□ 0.07
TIMP1-201ENST00000218388 ATP2B2Q01814 1243 aa15.48■□□□□ 0.07
TIMP1-201ENST00000218388 PPIL2Q13356 520 aa15.48■□□□□ 0.07
TIMP1-201ENST00000218388 SHROOM1Q2M3G4 852 aaPredicted RBP15.48■□□□□ 0.07
TIMP1-201ENST00000218388 TMEM67Q5HYA8 995 aa15.48■□□□□ 0.07
TIMP1-201ENST00000218388 RUFY3Q7L099 469 aa15.48■□□□□ 0.07
TIMP1-201ENST00000218388 DGKHQ86XP1 1220 aa15.48■□□□□ 0.07
TIMP1-201ENST00000218388 ZNF280CQ8ND82 737 aa15.48■□□□□ 0.07
TIMP1-201ENST00000218388 OPTNQ96CV9 577 aa15.48■□□□□ 0.07
TIMP1-201ENST00000218388 OTUD5Q96G74 571 aa15.48■□□□□ 0.07
TIMP1-201ENST00000218388 ZKSCAN3Q9BRR0 538 aa15.48■□□□□ 0.07
TIMP1-201ENST00000218388 WDR18Q9BV38 432 aa15.48■□□□□ 0.07
TIMP1-201ENST00000218388 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.48■□□□□ 0.07
TIMP1-201ENST00000218388 ZSWIM6Q9HCJ5 1215 aa15.48■□□□□ 0.07
TIMP1-201ENST00000218388 SYNPO2Q9UMS6 1093 aa15.48■□□□□ 0.07
TIMP1-201ENST00000218388 PHIPQ8WWQ0 1821 aa15.47■□□□□ 0.07
TIMP1-201ENST00000218388 ZBTB48P10074 688 aaPredicted RBP15.47■□□□□ 0.07
TIMP1-201ENST00000218388 EEF2P13639 858 aaKnown RBP15.47■□□□□ 0.07
TIMP1-201ENST00000218388 HOXD11P31277 338 aaPredicted RBP15.47■□□□□ 0.07
TIMP1-201ENST00000218388 ANTXR2P58335 489 aa15.47■□□□□ 0.07
TIMP1-201ENST00000218388 WTAPQ15007 396 aa15.47■□□□□ 0.07
TIMP1-201ENST00000218388 IFIT1BQ5T764 474 aaKnown RBP15.47■□□□□ 0.07
TIMP1-201ENST00000218388 CHST3Q7LGC8 479 aa15.47■□□□□ 0.07
TIMP1-201ENST00000218388 TMTC2Q8N394 836 aa15.47■□□□□ 0.07
TIMP1-201ENST00000218388 CCDC102AQ96A19 550 aa15.47■□□□□ 0.07
TIMP1-201ENST00000218388 WNK4Q96J92 1243 aa15.47■□□□□ 0.07
TIMP1-201ENST00000218388 IL17RBQ9NRM6 502 aa15.47■□□□□ 0.07
TIMP1-201ENST00000218388 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.47■□□□□ 0.07
TIMP1-201ENST00000218388 USP17L10C9JJH3 530 aa15.46■□□□□ 0.07
TIMP1-201ENST00000218388 NMT2O60551 498 aa15.46■□□□□ 0.07
TIMP1-201ENST00000218388 TOP1P11387 765 aaKnown RBP15.46■□□□□ 0.07
TIMP1-201ENST00000218388 USP14P54578 494 aa15.46■□□□□ 0.07
TIMP1-201ENST00000218388 C1QTNF8P60827 252 aa15.46■□□□□ 0.07
TIMP1-201ENST00000218388 EXOSC10Q01780 885 aaKnown RBP15.46■□□□□ 0.07
TIMP1-201ENST00000218388 RABEP1Q15276 862 aa15.46■□□□□ 0.07
TIMP1-201ENST00000218388 PAXIP1Q6ZW49 1069 aaPredicted RBP15.46■□□□□ 0.07
TIMP1-201ENST00000218388 ENAHQ8N8S7 591 aaPredicted RBP15.46■□□□□ 0.07
TIMP1-201ENST00000218388 UPF3BQ9BZI7 483 aaKnown RBP15.46■□□□□ 0.07
TIMP1-201ENST00000218388 KAT14Q9H8E8 782 aa15.46■□□□□ 0.07
TIMP1-201ENST00000218388 GOPCQ9HD26 462 aa15.46■□□□□ 0.07
TIMP1-201ENST00000218388 PDRG1Q9NUG6 133 aa15.46■□□□□ 0.07
TIMP1-201ENST00000218388 CLIP2Q9UDT6 1046 aa15.46■□□□□ 0.07
TIMP1-201ENST00000218388 AFG3L2Q9Y4W6 797 aa15.46■□□□□ 0.07
TIMP1-201ENST00000218388 TRIM75PA6NK02 468 aa15.45■□□□□ 0.06
TIMP1-201ENST00000218388 RASSF10A6NK89 507 aa15.45■□□□□ 0.06
TIMP1-201ENST00000218388 C19orf81C9J6K1 198 aa15.45■□□□□ 0.06
TIMP1-201ENST00000218388 CXCL11O14625 94 aa15.45■□□□□ 0.06
TIMP1-201ENST00000218388 NOVP48745 357 aa15.45■□□□□ 0.06
TIMP1-201ENST00000218388 SPP2Q13103 211 aa15.45■□□□□ 0.06
TIMP1-201ENST00000218388 DEFB115Q30KQ5 88 aa15.45■□□□□ 0.06
TIMP1-201ENST00000218388 SPRYD7Q5W111 196 aa15.45■□□□□ 0.06
TIMP1-201ENST00000218388 NFXL1Q6ZNB6 911 aa15.45■□□□□ 0.06
TIMP1-201ENST00000218388 CCDC84Q86UT8 332 aaPredicted RBP15.45■□□□□ 0.06
TIMP1-201ENST00000218388 RASAL3Q86YV0 1011 aa15.45■□□□□ 0.06
TIMP1-201ENST00000218388 CLEC10AQ8IUN9 316 aa15.45■□□□□ 0.06
TIMP1-201ENST00000218388 NKX2-3Q8TAU0 364 aa15.45■□□□□ 0.06
TIMP1-201ENST00000218388 ANKS1AQ92625 1134 aa15.45■□□□□ 0.06
TIMP1-201ENST00000218388 MKL1Q969V6 931 aa15.45■□□□□ 0.06
TIMP1-201ENST00000218388 KIAA1683Q9H0B3 1180 aa15.45■□□□□ 0.06
TIMP1-201ENST00000218388 TMX2Q9Y320 296 aa15.45■□□□□ 0.06
TIMP1-201ENST00000218388 CCDC69A6NI79 296 aa15.44■□□□□ 0.06
TIMP1-201ENST00000218388 SH2B2O14492 632 aaPredicted RBP15.44■□□□□ 0.06
TIMP1-201ENST00000218388 IRF6O14896 467 aa15.44■□□□□ 0.06
TIMP1-201ENST00000218388 SLC10A3P09131 477 aa15.44■□□□□ 0.06
TIMP1-201ENST00000218388 CPA1P15085 419 aa15.44■□□□□ 0.06
TIMP1-201ENST00000218388 LIFRP42702 1097 aa15.44■□□□□ 0.06
TIMP1-201ENST00000218388 ECE1P42892 770 aa15.44■□□□□ 0.06
TIMP1-201ENST00000218388 NEK4P51957 841 aa15.44■□□□□ 0.06
TIMP1-201ENST00000218388 GTF2A2P52657 109 aa15.44■□□□□ 0.06
TIMP1-201ENST00000218388 BACE1P56817 501 aa15.44■□□□□ 0.06
TIMP1-201ENST00000218388 SNAPC2Q13487 334 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms