RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 TNKSO95271 1327 aa32.08■■■□□ 2.73
CHMP4B-201ENST00000217402 EXOSC10Q01780 885 aaKnown RBP32.08■■■□□ 2.73
CHMP4B-201ENST00000217402 GINM1Q9NU53 330 aa32.08■■■□□ 2.73
CHMP4B-201ENST00000217402 TMEM88BA6NKF7 163 aa32.07■■■□□ 2.72
CHMP4B-201ENST00000217402 IFIT3O14879 490 aaKnown RBP32.07■■■□□ 2.72
CHMP4B-201ENST00000217402 PTPRAP18433 802 aa32.07■■■□□ 2.72
CHMP4B-201ENST00000217402 ATP2B2Q01814 1243 aa32.07■■■□□ 2.72
CHMP4B-201ENST00000217402 KANSL2Q9H9L4 492 aa32.07■■■□□ 2.72
CHMP4B-201ENST00000217402 TCP11L1Q9NUJ3 509 aa32.07■■■□□ 2.72
CHMP4B-201ENST00000217402 STX8Q9UNK0 236 aa32.07■■■□□ 2.72
CHMP4B-201ENST00000217402 SART3Q15020 963 aaKnown RBP32.06■■■□□ 2.72
CHMP4B-201ENST00000217402 GPHNQ9NQX3 736 aaPredicted RBP32.06■■■□□ 2.72
CHMP4B-201ENST00000217402 MTMR4Q9NYA4 1195 aa32.06■■■□□ 2.72
CHMP4B-201ENST00000217402 ABT1Q9ULW3 272 aaKnown RBP32.06■■■□□ 2.72
CHMP4B-201ENST00000217402 TMEM67Q5HYA8 995 aa32.05■■■□□ 2.72
CHMP4B-201ENST00000217402 ENAHQ8N8S7 591 aaPredicted RBP32.05■■■□□ 2.72
CHMP4B-201ENST00000217402 CNKSR2Q8WXI2 1034 aa32.05■■■□□ 2.72
CHMP4B-201ENST00000217402 ERICH2A1L162 156 aa32.04■■■□□ 2.72
CHMP4B-201ENST00000217402 USP17L5A8MUK1 530 aa32.04■■■□□ 2.72
CHMP4B-201ENST00000217402 NEK4P51957 841 aa32.04■■■□□ 2.72
CHMP4B-201ENST00000217402 SAPCD2Q86UD0 394 aa32.04■■■□□ 2.72
CHMP4B-201ENST00000217402 ZHX2Q9Y6X8 837 aa32.04■■■□□ 2.72
CHMP4B-201ENST00000217402 WDR19Q8NEZ3 1342 aa32.04■■■□□ 2.72
CHMP4B-201ENST00000217402 EEF2P13639 858 aaKnown RBP32.04■■■□□ 2.72
CHMP4B-201ENST00000217402 FGD1P98174 961 aa32.04■■■□□ 2.72
CHMP4B-201ENST00000217402 SLC10A4Q96EP9 437 aa32.04■■■□□ 2.72
CHMP4B-201ENST00000217402 PDRG1Q9NUG6 133 aa32.04■■■□□ 2.72
CHMP4B-201ENST00000217402 TTLL1O95922 423 aa32.03■■■□□ 2.72
CHMP4B-201ENST00000217402 RABEP1Q15276 862 aa32.03■■■□□ 2.72
CHMP4B-201ENST00000217402 IGDCC4Q8TDY8 1250 aa32.03■■■□□ 2.72
CHMP4B-201ENST00000217402 OTUD5Q96G74 571 aa32.03■■■□□ 2.72
CHMP4B-201ENST00000217402 TMEM87BQ96K49 555 aa32.03■■■□□ 2.72
CHMP4B-201ENST00000217402 CLIP2Q9UDT6 1046 aa32.03■■■□□ 2.72
CHMP4B-201ENST00000217402 TLL2Q9Y6L7 1015 aa32.03■■■□□ 2.72
CHMP4B-201ENST00000217402 UNCXA6NJT0 531 aa32.02■■■□□ 2.72
CHMP4B-201ENST00000217402 SH2B2O14492 632 aaPredicted RBP32.02■■■□□ 2.72
CHMP4B-201ENST00000217402 SEC23AQ15436 765 aa32.02■■■□□ 2.72
CHMP4B-201ENST00000217402 CCDC178Q5BJE1 867 aa32.02■■■□□ 2.72
CHMP4B-201ENST00000217402 RCSD1Q6JBY9 416 aa32.02■■■□□ 2.72
CHMP4B-201ENST00000217402 Q6ZUG5 572 aa32.02■■■□□ 2.72
CHMP4B-201ENST00000217402 SIAH1Q8IUQ4 282 aa32.02■■■□□ 2.72
CHMP4B-201ENST00000217402 SENP2Q9HC62 589 aa32.02■■■□□ 2.72
CHMP4B-201ENST00000217402 APLP1P51693 650 aa32.01■■■□□ 2.72
CHMP4B-201ENST00000217402 WTAPQ15007 396 aa32.01■■■□□ 2.72
CHMP4B-201ENST00000217402 ERO1BQ86YB8 467 aa32.01■■■□□ 2.72
CHMP4B-201ENST00000217402 ACER1Q8TDN7 264 aa32.01■■■□□ 2.72
CHMP4B-201ENST00000217402 OPTNQ96CV9 577 aa32.01■■■□□ 2.72
CHMP4B-201ENST00000217402 SPDYE5A6NIY4 337 aa32■■■□□ 2.71
CHMP4B-201ENST00000217402 ECE1P42892 770 aa32■■■□□ 2.71
CHMP4B-201ENST00000217402 IFIT1BQ5T764 474 aaKnown RBP32■■■□□ 2.71
CHMP4B-201ENST00000217402 LRRC47Q8N1G4 583 aaKnown RBP32■■■□□ 2.71
CHMP4B-201ENST00000217402 LY9Q9HBG7 655 aa32■■■□□ 2.71
CHMP4B-201ENST00000217402 AS3MTQ9HBK9 375 aa32■■■□□ 2.71
CHMP4B-201ENST00000217402 ARHGEF10LQ9HCE6 1279 aa32■■■□□ 2.71
CHMP4B-201ENST00000217402 NYAP2Q9P242 653 aa32■■■□□ 2.71
CHMP4B-201ENST00000217402 PPP4R3BQ5MIZ7 849 aa32■■■□□ 2.71
CHMP4B-201ENST00000217402 DGKHQ86XP1 1220 aa32■■■□□ 2.71
CHMP4B-201ENST00000217402 MTA3Q9BTC8 594 aa32■■■□□ 2.71
CHMP4B-201ENST00000217402 A0A1W2PRG0 241 aa31.99■■■□□ 2.71
CHMP4B-201ENST00000217402 TRIM75PA6NK02 468 aa31.99■■■□□ 2.71
CHMP4B-201ENST00000217402 TTC14Q96N46 770 aa31.99■■■□□ 2.71
CHMP4B-201ENST00000217402 FEZ1Q99689 392 aa31.99■■■□□ 2.71
CHMP4B-201ENST00000217402 TMEM47Q9BQJ4 181 aa31.99■■■□□ 2.71
CHMP4B-201ENST00000217402 NOVP48745 357 aa31.98■■■□□ 2.71
CHMP4B-201ENST00000217402 PPATQ06203 517 aa31.98■■■□□ 2.71
CHMP4B-201ENST00000217402 SPP2Q13103 211 aa31.98■■■□□ 2.71
CHMP4B-201ENST00000217402 ZNF280CQ8ND82 737 aa31.98■■■□□ 2.71
CHMP4B-201ENST00000217402 BRF1Q92994 677 aa31.98■■■□□ 2.71
CHMP4B-201ENST00000217402 ZYXQ15942 572 aaKnown RBP31.97■■■□□ 2.71
CHMP4B-201ENST00000217402 NFXL1Q6ZNB6 911 aa31.97■■■□□ 2.71
CHMP4B-201ENST00000217402 KAT14Q9H8E8 782 aa31.97■■■□□ 2.71
CHMP4B-201ENST00000217402 PHIPQ8WWQ0 1821 aa31.97■■■□□ 2.71
CHMP4B-201ENST00000217402 TOP1P11387 765 aaKnown RBP31.97■■■□□ 2.71
CHMP4B-201ENST00000217402 ZNF157P51786 506 aaPredicted RBP31.97■■■□□ 2.71
CHMP4B-201ENST00000217402 WDR18Q9BV38 432 aa31.97■■■□□ 2.71
CHMP4B-201ENST00000217402 CREBZFQ9NS37 354 aa31.97■■■□□ 2.71
CHMP4B-201ENST00000217402 AFG3L2Q9Y4W6 797 aa31.97■■■□□ 2.71
CHMP4B-201ENST00000217402 RAD21O60216 631 aa31.96■■■□□ 2.71
CHMP4B-201ENST00000217402 GJA5P36382 358 aa31.96■■■□□ 2.71
CHMP4B-201ENST00000217402 AK2P54819 239 aa31.96■■■□□ 2.71
CHMP4B-201ENST00000217402 MKRN3Q13064 507 aaKnown RBP31.96■■■□□ 2.71
CHMP4B-201ENST00000217402 MTMR2Q13614 643 aa31.96■■■□□ 2.71
CHMP4B-201ENST00000217402 TOB2Q14106 344 aaPredicted RBP31.96■■■□□ 2.71
CHMP4B-201ENST00000217402 RGMBQ6NW40 437 aa31.96■■■□□ 2.71
CHMP4B-201ENST00000217402 ANKS1AQ92625 1134 aa31.96■■■□□ 2.71
CHMP4B-201ENST00000217402 WNK4Q96J92 1243 aa31.96■■■□□ 2.71
CHMP4B-201ENST00000217402 LARP6Q9BRS8 491 aaKnown RBP31.96■■■□□ 2.71
CHMP4B-201ENST00000217402 MTMR7Q9Y216 660 aa31.96■■■□□ 2.71
CHMP4B-201ENST00000217402 IRF6O14896 467 aa31.95■■■□□ 2.71
CHMP4B-201ENST00000217402 LIFRP42702 1097 aa31.95■■■□□ 2.71
CHMP4B-201ENST00000217402 PPIL2Q13356 520 aa31.95■■■□□ 2.71
CHMP4B-201ENST00000217402 NOL8Q76FK4 1167 aaKnown RBP31.95■■■□□ 2.71
CHMP4B-201ENST00000217402 CHMP4CQ96CF2 233 aa31.95■■■□□ 2.71
CHMP4B-201ENST00000217402 TBC1D2Q9BYX2 928 aa31.95■■■□□ 2.71
CHMP4B-201ENST00000217402 SH2D4AQ9H788 454 aa31.95■■■□□ 2.71
CHMP4B-201ENST00000217402 TMX2Q9Y320 296 aa31.95■■■□□ 2.71
CHMP4B-201ENST00000217402 MYH4Q9Y623 1939 aa31.94■■■□□ 2.7
CHMP4B-201ENST00000217402 CCDC69A6NI79 296 aa31.94■■■□□ 2.7
CHMP4B-201ENST00000217402 MKL1Q969V6 931 aa31.94■■■□□ 2.7
CHMP4B-201ENST00000217402 USP17L10C9JJH3 530 aa31.93■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms