RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 PPP6R2O75170 966 aa20.08■□□□□ 0.81
VRK1-201ENST00000216639 GNAQP50148 359 aa20.08■□□□□ 0.81
VRK1-201ENST00000216639 GRIPAP1Q4V328 841 aa20.08■□□□□ 0.81
VRK1-201ENST00000216639 RILPL1Q5EBL4 403 aa20.08■□□□□ 0.81
VRK1-201ENST00000216639 STRIP1Q5VSL9 837 aa20.08■□□□□ 0.81
VRK1-201ENST00000216639 PNMA1Q8ND90 353 aa20.08■□□□□ 0.81
VRK1-201ENST00000216639 BRMS1Q9HCU9 246 aa20.08■□□□□ 0.81
VRK1-201ENST00000216639 FOCADQ5VW36 1801 aa20.08■□□□□ 0.81
VRK1-201ENST00000216639 SLX4Q8IY92 1834 aa20.08■□□□□ 0.8
VRK1-201ENST00000216639 SASS6Q6UVJ0 657 aa20.07■□□□□ 0.8
VRK1-201ENST00000216639 SLC44A5Q8NCS7 719 aa20.07■□□□□ 0.8
VRK1-201ENST00000216639 USP40Q9NVE5 1235 aa20.07■□□□□ 0.8
VRK1-201ENST00000216639 ZNF219Q9P2Y4 722 aaPredicted RBP20.07■□□□□ 0.8
VRK1-201ENST00000216639 MYH1P12882 1939 aa20.07■□□□□ 0.8
VRK1-201ENST00000216639 MYH6P13533 1939 aa20.07■□□□□ 0.8
VRK1-201ENST00000216639 CNTNAP5Q8WYK1 1306 aa20.07■□□□□ 0.8
VRK1-201ENST00000216639 ECE2O60344 883 aa20.07■□□□□ 0.8
VRK1-201ENST00000216639 PKN1Q16512 942 aa20.07■□□□□ 0.8
VRK1-201ENST00000216639 NEDD1Q8NHV4 660 aa20.07■□□□□ 0.8
VRK1-201ENST00000216639 MRIQ9BWK5 157 aa20.07■□□□□ 0.8
VRK1-201ENST00000216639 GOLPH3LQ9H4A5 285 aa20.07■□□□□ 0.8
VRK1-201ENST00000216639 USP17L3A6NCW0 530 aa20.06■□□□□ 0.8
VRK1-201ENST00000216639 USP17L4A6NCW7 530 aa20.06■□□□□ 0.8
VRK1-201ENST00000216639 TYRO3Q06418 890 aa20.06■□□□□ 0.8
VRK1-201ENST00000216639 PICALMQ13492 652 aa20.06■□□□□ 0.8
VRK1-201ENST00000216639 USP17L1Q7RTZ2 530 aa20.06■□□□□ 0.8
VRK1-201ENST00000216639 CKAP2LQ8IYA6 745 aa20.06■□□□□ 0.8
VRK1-201ENST00000216639 SRBD1Q8N5C6 995 aaKnown RBP20.06■□□□□ 0.8
VRK1-201ENST00000216639 ENGASEQ8NFI3 743 aa20.06■□□□□ 0.8
VRK1-201ENST00000216639 C7orf43Q8WVR3 580 aa20.06■□□□□ 0.8
VRK1-201ENST00000216639 STX8Q9UNK0 236 aa20.06■□□□□ 0.8
VRK1-201ENST00000216639 KRT2P35908 639 aa20.05■□□□□ 0.8
VRK1-201ENST00000216639 SCNN1DP51172 638 aa20.05■□□□□ 0.8
VRK1-201ENST00000216639 HDLBPQ00341 1268 aaKnown RBP20.05■□□□□ 0.8
VRK1-201ENST00000216639 SNW1Q13573 536 aaKnown RBP20.05■□□□□ 0.8
VRK1-201ENST00000216639 GRM4Q14833 912 aa20.05■□□□□ 0.8
VRK1-201ENST00000216639 SLC16A10Q8TF71 515 aa20.05■□□□□ 0.8
VRK1-201ENST00000216639 PHF20Q9BVI0 1012 aa20.05■□□□□ 0.8
VRK1-201ENST00000216639 MXD3Q9BW11 206 aa20.05■□□□□ 0.8
VRK1-201ENST00000216639 VPS54Q9P1Q0 977 aa20.05■□□□□ 0.8
VRK1-201ENST00000216639 CMA1P23946 247 aa20.05■□□□□ 0.8
VRK1-201ENST00000216639 PTPAQ15257 358 aa20.05■□□□□ 0.8
VRK1-201ENST00000216639 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.05■□□□□ 0.8
VRK1-201ENST00000216639 CEP131Q9UPN4 1083 aa20.05■□□□□ 0.8
VRK1-201ENST00000216639 C10orf71Q711Q0 1435 aa20.04■□□□□ 0.8
VRK1-201ENST00000216639 WDHD1O75717 1129 aaPredicted RBP20.04■□□□□ 0.8
VRK1-201ENST00000216639 CAVIN2O95810 425 aa20.04■□□□□ 0.8
VRK1-201ENST00000216639 SCG2P13521 617 aa20.04■□□□□ 0.8
VRK1-201ENST00000216639 CRKP46108 304 aa20.04■□□□□ 0.8
VRK1-201ENST00000216639 KIAA2012Q0VF49 1180 aa20.04■□□□□ 0.8
VRK1-201ENST00000216639 FMR1NBQ8N0W7 255 aaPredicted RBP20.04■□□□□ 0.8
VRK1-201ENST00000216639 ZDHHC15Q96MV8 337 aa20.04■□□□□ 0.8
VRK1-201ENST00000216639 TMEM47Q9BQJ4 181 aa20.04■□□□□ 0.8
VRK1-201ENST00000216639 LZTS2Q9BRK4 669 aa20.04■□□□□ 0.8
VRK1-201ENST00000216639 SWAP70Q9UH65 585 aa20.04■□□□□ 0.8
VRK1-201ENST00000216639 SNED1Q8TER0 1413 aa20.03■□□□□ 0.8
VRK1-201ENST00000216639 HLA-DOAP06340 250 aa20.03■□□□□ 0.8
VRK1-201ENST00000216639 DACT2Q5SW24 774 aa20.03■□□□□ 0.8
VRK1-201ENST00000216639 AXDND1Q5T1B0 1012 aaPredicted RBP20.03■□□□□ 0.8
VRK1-201ENST00000216639 CDC42EP5Q6NZY7 148 aa20.03■□□□□ 0.8
VRK1-201ENST00000216639 PDLIM2Q96JY6 352 aa20.03■□□□□ 0.8
VRK1-201ENST00000216639 A0A1B0GVL5 298 aa20.02■□□□□ 0.8
VRK1-201ENST00000216639 CUTAO60888 179 aa20.02■□□□□ 0.8
VRK1-201ENST00000216639 MARCKSP29966 332 aaPredicted RBP20.02■□□□□ 0.8
VRK1-201ENST00000216639 PFKFB3Q16875 520 aaPredicted RBP20.02■□□□□ 0.8
VRK1-201ENST00000216639 APOBEC3HQ6NTF7 200 aaKnown RBP20.02■□□□□ 0.8
VRK1-201ENST00000216639 DEFB132Q7Z7B7 95 aa20.02■□□□□ 0.8
VRK1-201ENST00000216639 FAM200AQ8TCP9 573 aa20.02■□□□□ 0.8
VRK1-201ENST00000216639 OSBPL5Q9H0X9 879 aaPredicted RBP20.02■□□□□ 0.8
VRK1-201ENST00000216639 MRVI1Q9Y6F6 885 aa20.02■□□□□ 0.8
VRK1-201ENST00000216639 hCG_1642624A0A1W2PR95 340 aa20.02■□□□□ 0.79
VRK1-201ENST00000216639 TOP1P11387 765 aaKnown RBP20.02■□□□□ 0.79
VRK1-201ENST00000216639 NDUFA8P51970 172 aa20.02■□□□□ 0.79
VRK1-201ENST00000216639 NR5A1Q13285 461 aa20.02■□□□□ 0.79
VRK1-201ENST00000216639 AOC3Q16853 763 aa20.02■□□□□ 0.79
VRK1-201ENST00000216639 TTLL6Q8N841 843 aa20.02■□□□□ 0.79
VRK1-201ENST00000216639 SDF4Q9BRK5 362 aa20.02■□□□□ 0.79
VRK1-201ENST00000216639 SERPINB13Q9UIV8 391 aa20.02■□□□□ 0.79
VRK1-201ENST00000216639 NOL7Q9UMY1 257 aaKnown RBP20.02■□□□□ 0.79
VRK1-201ENST00000216639 MYO3BQ8WXR4 1341 aa20.01■□□□□ 0.79
VRK1-201ENST00000216639 GABPAQ06546 454 aa20.01■□□□□ 0.79
VRK1-201ENST00000216639 KIAA0825Q8IV33 1275 aa20.01■□□□□ 0.79
VRK1-201ENST00000216639 RTKN2Q8IZC4 609 aa20.01■□□□□ 0.79
VRK1-201ENST00000216639 OXER1Q8TDS5 423 aa20.01■□□□□ 0.79
VRK1-201ENST00000216639 CABP5Q9NP86 173 aa20.01■□□□□ 0.79
VRK1-201ENST00000216639 DDX4Q9NQI0 724 aaKnown RBP20.01■□□□□ 0.79
VRK1-201ENST00000216639 SH3GLB2Q9NR46 395 aa20.01■□□□□ 0.79
VRK1-201ENST00000216639 KCNQ5Q9NR82 932 aa20.01■□□□□ 0.79
VRK1-201ENST00000216639 PLIN4Q96Q06 1357 aa20.01■□□□□ 0.79
VRK1-201ENST00000216639 PPIP5K2O43314 1243 aa20■□□□□ 0.79
VRK1-201ENST00000216639 C21orf2O43822 256 aa20■□□□□ 0.79
VRK1-201ENST00000216639 RBM5P52756 815 aaKnown RBP eCLIP20■□□□□ 0.79
VRK1-201ENST00000216639 NLRP5P59047 1200 aa20■□□□□ 0.79
VRK1-201ENST00000216639 CCDC93Q567U6 631 aa20■□□□□ 0.79
VRK1-201ENST00000216639 KRI1Q8N9T8 703 aaKnown RBP20■□□□□ 0.79
VRK1-201ENST00000216639 MAD2L2Q9UI95 211 aa20■□□□□ 0.79
VRK1-201ENST00000216639 SERPINA10Q9UK55 444 aa20■□□□□ 0.79
VRK1-201ENST00000216639 PFKFB1P16118 471 aa19.99■□□□□ 0.79
VRK1-201ENST00000216639 CALML3P27482 149 aa19.99■□□□□ 0.79
VRK1-201ENST00000216639 TOB1P50616 345 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms