RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 MAP3K10Q02779 954 aa18.63■□□□□ 0.57
SNRPD3-201ENST00000215829 TROAPQ12815 778 aa18.63■□□□□ 0.57
SNRPD3-201ENST00000215829 PPP2R5BQ15173 497 aa18.63■□□□□ 0.57
SNRPD3-201ENST00000215829 CDAN1Q8IWY9 1227 aa18.63■□□□□ 0.57
SNRPD3-201ENST00000215829 FANCBQ8NB91 859 aa18.63■□□□□ 0.57
SNRPD3-201ENST00000215829 KAT14Q9H8E8 782 aa18.63■□□□□ 0.57
SNRPD3-201ENST00000215829 FAM217BQ9NTX9 383 aaPredicted RBP18.63■□□□□ 0.57
SNRPD3-201ENST00000215829 STX8Q9UNK0 236 aa18.63■□□□□ 0.57
SNRPD3-201ENST00000215829 CPLX1O14810 134 aa18.63■□□□□ 0.57
SNRPD3-201ENST00000215829 JAK2O60674 1132 aa18.63■□□□□ 0.57
SNRPD3-201ENST00000215829 DTNBO60941 627 aa18.63■□□□□ 0.57
SNRPD3-201ENST00000215829 DDAH1O94760 285 aa18.63■□□□□ 0.57
SNRPD3-201ENST00000215829 CDC27P30260 824 aa18.63■□□□□ 0.57
SNRPD3-201ENST00000215829 ADD1P35611 737 aaKnown RBP18.63■□□□□ 0.57
SNRPD3-201ENST00000215829 NUCB2P80303 420 aa18.63■□□□□ 0.57
SNRPD3-201ENST00000215829 CCDC144CPQ8IYA2 1237 aa18.63■□□□□ 0.57
SNRPD3-201ENST00000215829 NUP133Q8WUM0 1156 aa18.63■□□□□ 0.57
SNRPD3-201ENST00000215829 TMEM47Q9BQJ4 181 aa18.63■□□□□ 0.57
SNRPD3-201ENST00000215829 MTMR4Q9NYA4 1195 aa18.63■□□□□ 0.57
SNRPD3-201ENST00000215829 CCDC196A0A1B0GTZ2 297 aa18.62■□□□□ 0.57
SNRPD3-201ENST00000215829 MPHOSPH10O00566 681 aaKnown RBP18.62■□□□□ 0.57
SNRPD3-201ENST00000215829 HMGN5P82970 282 aaKnown RBP18.62■□□□□ 0.57
SNRPD3-201ENST00000215829 RTN1Q16799 776 aa18.62■□□□□ 0.57
SNRPD3-201ENST00000215829 GREB1LQ9C091 1923 aaPredicted RBP18.62■□□□□ 0.57
SNRPD3-201ENST00000215829 PTPDC1A2A3K4 754 aa18.61■□□□□ 0.57
SNRPD3-201ENST00000215829 CPLX2Q6PUV4 134 aaKnown RBP18.61■□□□□ 0.57
SNRPD3-201ENST00000215829 PNMA1Q8ND90 353 aa18.61■□□□□ 0.57
SNRPD3-201ENST00000215829 GGA3Q9NZ52 723 aa18.61■□□□□ 0.57
SNRPD3-201ENST00000215829 PITPNM2Q9BZ72 1349 aa18.61■□□□□ 0.57
SNRPD3-201ENST00000215829 CDKL5O76039 1030 aa18.6■□□□□ 0.57
SNRPD3-201ENST00000215829 TOP1P11387 765 aaKnown RBP18.6■□□□□ 0.57
SNRPD3-201ENST00000215829 ABCB5Q2M3G0 1257 aa18.6■□□□□ 0.57
SNRPD3-201ENST00000215829 PPP4R3BQ5MIZ7 849 aa18.6■□□□□ 0.57
SNRPD3-201ENST00000215829 MIGA2Q7L4E1 593 aa18.6■□□□□ 0.57
SNRPD3-201ENST00000215829 MAP3K14Q99558 947 aa18.6■□□□□ 0.57
SNRPD3-201ENST00000215829 TTLL1O95922 423 aa18.6■□□□□ 0.57
SNRPD3-201ENST00000215829 PKP1Q13835 747 aa18.6■□□□□ 0.57
SNRPD3-201ENST00000215829 RRP1BQ14684 758 aaKnown RBP18.6■□□□□ 0.57
SNRPD3-201ENST00000215829 RAB3GAP1Q15042 981 aa18.6■□□□□ 0.57
SNRPD3-201ENST00000215829 NTRK3Q16288 839 aa18.6■□□□□ 0.57
SNRPD3-201ENST00000215829 TMEM179Q6ZVK1 233 aa18.6■□□□□ 0.57
SNRPD3-201ENST00000215829 DDX11Q96FC9 970 aa18.6■□□□□ 0.57
SNRPD3-201ENST00000215829 PPP2R3BQ9Y5P8 575 aa18.6■□□□□ 0.57
SNRPD3-201ENST00000215829 GDF11O95390 407 aa18.59■□□□□ 0.57
SNRPD3-201ENST00000215829 PDIA4P13667 645 aaKnown RBP18.59■□□□□ 0.57
SNRPD3-201ENST00000215829 PDCP20941 246 aa18.59■□□□□ 0.57
SNRPD3-201ENST00000215829 SYT1P21579 422 aa18.59■□□□□ 0.57
SNRPD3-201ENST00000215829 USP50Q70EL3 339 aaPredicted RBP18.59■□□□□ 0.57
SNRPD3-201ENST00000215829 KANSL2Q9H9L4 492 aa18.59■□□□□ 0.57
SNRPD3-201ENST00000215829 CABP5Q9NP86 173 aa18.59■□□□□ 0.57
SNRPD3-201ENST00000215829 RBM28Q9NW13 759 aaKnown RBP18.59■□□□□ 0.57
SNRPD3-201ENST00000215829 EPHX2P34913 555 aa18.58■□□□□ 0.57
SNRPD3-201ENST00000215829 LARP1BQ659C4 914 aaKnown RBP18.58■□□□□ 0.57
SNRPD3-201ENST00000215829 FAM184AQ8NB25 1140 aa18.58■□□□□ 0.57
SNRPD3-201ENST00000215829 CTCFLQ8NI51 663 aaPredicted RBP18.58■□□□□ 0.57
SNRPD3-201ENST00000215829 CLIP2Q9UDT6 1046 aa18.58■□□□□ 0.57
SNRPD3-201ENST00000215829 GH2P01242 217 aa18.58■□□□□ 0.56
SNRPD3-201ENST00000215829 FDPSP14324 419 aaKnown RBP18.58■□□□□ 0.56
SNRPD3-201ENST00000215829 IFNAR1P17181 557 aa18.58■□□□□ 0.56
SNRPD3-201ENST00000215829 GUCY1A2P33402 732 aa18.58■□□□□ 0.56
SNRPD3-201ENST00000215829 SEPT2Q15019 361 aa18.58■□□□□ 0.56
SNRPD3-201ENST00000215829 SHROOM1Q2M3G4 852 aaPredicted RBP18.58■□□□□ 0.56
SNRPD3-201ENST00000215829 NBPF12Q5TAG4 269 aaPredicted RBP18.58■□□□□ 0.56
SNRPD3-201ENST00000215829 ZDHHC9Q9Y397 364 aa18.58■□□□□ 0.56
SNRPD3-201ENST00000215829 KIF3AQ9Y496 699 aa18.58■□□□□ 0.56
SNRPD3-201ENST00000215829 SCN4AP35499 1836 aa18.57■□□□□ 0.56
SNRPD3-201ENST00000215829 POLR2AP24928 1970 aaKnown RBP18.57■□□□□ 0.56
SNRPD3-201ENST00000215829 IQCA1LA6NCM1 817 aa18.57■□□□□ 0.56
SNRPD3-201ENST00000215829 STX6O43752 255 aa18.57■□□□□ 0.56
SNRPD3-201ENST00000215829 BRD1O95696 1058 aa18.57■□□□□ 0.56
SNRPD3-201ENST00000215829 JAG1P78504 1218 aa18.57■□□□□ 0.56
SNRPD3-201ENST00000215829 CLEC10AQ8IUN9 316 aa18.57■□□□□ 0.56
SNRPD3-201ENST00000215829 MKL1Q969V6 931 aa18.57■□□□□ 0.56
SNRPD3-201ENST00000215829 DCPSQ96C86 337 aaKnown RBP18.57■□□□□ 0.56
SNRPD3-201ENST00000215829 HOOK2Q96ED9 719 aa18.57■□□□□ 0.56
SNRPD3-201ENST00000215829 NYAP2Q9P242 653 aa18.57■□□□□ 0.56
SNRPD3-201ENST00000215829 PHF20L1A8MW92 1017 aa18.56■□□□□ 0.56
SNRPD3-201ENST00000215829 PPFIA3O75145 1194 aa18.56■□□□□ 0.56
SNRPD3-201ENST00000215829 KIF5BP33176 963 aa18.56■□□□□ 0.56
SNRPD3-201ENST00000215829 GRM4Q14833 912 aa18.56■□□□□ 0.56
SNRPD3-201ENST00000215829 ZC3H15Q8WU90 426 aaKnown RBP18.56■□□□□ 0.56
SNRPD3-201ENST00000215829 ORC3Q9UBD5 711 aaPredicted RBP18.56■□□□□ 0.56
SNRPD3-201ENST00000215829 POTECB2RU33 542 aa18.55■□□□□ 0.56
SNRPD3-201ENST00000215829 EEF2P13639 858 aaKnown RBP18.55■□□□□ 0.56
SNRPD3-201ENST00000215829 CAP2P40123 477 aa18.55■□□□□ 0.56
SNRPD3-201ENST00000215829 DCAF15Q66K64 600 aa18.55■□□□□ 0.56
SNRPD3-201ENST00000215829 NBPF11Q86T75 865 aa18.55■□□□□ 0.56
SNRPD3-201ENST00000215829 SIAH1Q8IUQ4 282 aa18.55■□□□□ 0.56
SNRPD3-201ENST00000215829 PHKBQ93100 1093 aa18.55■□□□□ 0.56
SNRPD3-201ENST00000215829 TAF1DQ9H5J8 278 aaPredicted RBP18.55■□□□□ 0.56
SNRPD3-201ENST00000215829 WDR33Q9C0J8 1336 aaKnown RBP18.55■□□□□ 0.56
SNRPD3-201ENST00000215829 DCAF8L1A6NGE4 600 aa18.55■□□□□ 0.56
SNRPD3-201ENST00000215829 FMNL1O95466 1100 aaPredicted RBP18.55■□□□□ 0.56
SNRPD3-201ENST00000215829 ICA1Q05084 483 aa18.55■□□□□ 0.56
SNRPD3-201ENST00000215829 SSRP1Q08945 709 aaKnown RBP18.55■□□□□ 0.56
SNRPD3-201ENST00000215829 PRAMEF18Q5VWM3 479 aa18.55■□□□□ 0.56
SNRPD3-201ENST00000215829 TMTC3Q6ZXV5 915 aa18.55■□□□□ 0.56
SNRPD3-201ENST00000215829 WDR90Q96KV7 1748 aa18.55■□□□□ 0.56
SNRPD3-201ENST00000215829 STK36Q9NRP7 1315 aa18.55■□□□□ 0.56
SNRPD3-201ENST00000215829 MYH4Q9Y623 1939 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms