RNA–Protein interactions for RNA: ENST00000198939.6

CHERP-201, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 5 BASIC

Gene CHERP, Length 4,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-201ENST00000198939 GREM2Q9H772 168 aa11.65□□□□□ -0.54
CHERP-201ENST00000198939 BSDC1Q9NW68 430 aaPredicted RBP11.65□□□□□ -0.54
CHERP-201ENST00000198939 AKAP2Q9Y2D5 859 aa11.65□□□□□ -0.54
CHERP-201ENST00000198939 IKBKBO14920 756 aa11.65□□□□□ -0.54
CHERP-201ENST00000198939 MYCNP04198 464 aaPredicted RBP11.65□□□□□ -0.54
CHERP-201ENST00000198939 ADD1P35611 737 aaKnown RBP11.65□□□□□ -0.54
CHERP-201ENST00000198939 ADKP55263 362 aaKnown RBP11.65□□□□□ -0.54
CHERP-201ENST00000198939 TICAM2Q86XR7 235 aa11.65□□□□□ -0.54
CHERP-201ENST00000198939 VSTM4Q8IW00 320 aa11.65□□□□□ -0.54
CHERP-201ENST00000198939 DPF2Q92785 391 aa11.65□□□□□ -0.54
CHERP-201ENST00000198939 CXorf56Q9H5V9 222 aa11.65□□□□□ -0.54
CHERP-201ENST00000198939 CEP126Q9P2H0 1117 aa11.65□□□□□ -0.54
CHERP-201ENST00000198939 MROH5Q6ZUA9 1318 aa11.65□□□□□ -0.54
CHERP-201ENST00000198939 EYA2O00167 538 aa11.65□□□□□ -0.54
CHERP-201ENST00000198939 LIG3P49916 1009 aa11.65□□□□□ -0.54
CHERP-201ENST00000198939 CASP8Q14790 479 aa11.65□□□□□ -0.54
CHERP-201ENST00000198939 CCDC24Q8N4L8 307 aa11.65□□□□□ -0.54
CHERP-201ENST00000198939 TTLL6Q8N841 843 aa11.65□□□□□ -0.54
CHERP-201ENST00000198939 CEP83Q9Y592 693 aa11.65□□□□□ -0.54
CHERP-201ENST00000198939 A0A1W2PQ27 194 aa11.65□□□□□ -0.55
CHERP-201ENST00000198939 A0A1W2PQ64 194 aa11.65□□□□□ -0.55
CHERP-201ENST00000198939 A0A1W2PQD8 194 aa11.65□□□□□ -0.55
CHERP-201ENST00000198939 CTAGE15A4D2H0 777 aa11.65□□□□□ -0.55
CHERP-201ENST00000198939 STX10O60499 249 aa11.65□□□□□ -0.55
CHERP-201ENST00000198939 CTAGE8P0CG41 777 aa11.65□□□□□ -0.55
CHERP-201ENST00000198939 KCNA4P22459 653 aa11.65□□□□□ -0.55
CHERP-201ENST00000198939 BEND6Q5SZJ8 279 aaPredicted RBP11.65□□□□□ -0.55
CHERP-201ENST00000198939 LRRC31Q6UY01 552 aa11.65□□□□□ -0.55
CHERP-201ENST00000198939 CTAGE6Q86UF2 777 aa11.65□□□□□ -0.55
CHERP-201ENST00000198939 CTAGE4Q8IX94 777 aa11.65□□□□□ -0.55
CHERP-201ENST00000198939 RABEP2Q9H5N1 569 aa11.65□□□□□ -0.55
CHERP-201ENST00000198939 SUGCTQ9HAC7 445 aa11.65□□□□□ -0.55
CHERP-201ENST00000198939 NCOA5Q9HCD5 579 aaKnown RBP11.65□□□□□ -0.55
CHERP-201ENST00000198939 U3KPZ7 1027 aaPredicted RBP11.65□□□□□ -0.55
CHERP-201ENST00000198939 TUBB4BP68371 445 aa11.64□□□□□ -0.55
CHERP-201ENST00000198939 AKAP17AQ02040 695 aaKnown RBP11.64□□□□□ -0.55
CHERP-201ENST00000198939 ZNF589Q86UQ0 364 aaPredicted RBP11.64□□□□□ -0.55
CHERP-201ENST00000198939 NSUN7Q8NE18 718 aaKnown RBP11.64□□□□□ -0.55
CHERP-201ENST00000198939 CAGE1Q8TC20 777 aa11.64□□□□□ -0.55
CHERP-201ENST00000198939 CCDC85AQ96PX6 553 aaPredicted RBP11.64□□□□□ -0.55
CHERP-201ENST00000198939 TMEM232C9JQI7 657 aa11.64□□□□□ -0.55
CHERP-201ENST00000198939 EBAG9O00559 213 aa11.64□□□□□ -0.55
CHERP-201ENST00000198939 MMP14P50281 582 aa11.64□□□□□ -0.55
CHERP-201ENST00000198939 ZNF569Q5MCW4 686 aa11.64□□□□□ -0.55
CHERP-201ENST00000198939 TOGARAM2Q6ZUX3 1019 aa11.64□□□□□ -0.55
CHERP-201ENST00000198939 MED4Q9NPJ6 270 aa11.64□□□□□ -0.55
CHERP-201ENST00000198939 FANCGO15287 622 aa11.64□□□□□ -0.55
CHERP-201ENST00000198939 CUTAO60888 179 aa11.64□□□□□ -0.55
CHERP-201ENST00000198939 SYKP43405 635 aa11.64□□□□□ -0.55
CHERP-201ENST00000198939 HNRNPLLQ8WVV9 542 aaKnown RBP11.64□□□□□ -0.55
CHERP-201ENST00000198939 SEC62Q99442 399 aaKnown RBP11.64□□□□□ -0.55
CHERP-201ENST00000198939 FANCLQ9NW38 375 aa11.64□□□□□ -0.55
CHERP-201ENST00000198939 DCAF8L1A6NGE4 600 aa11.63□□□□□ -0.55
CHERP-201ENST00000198939 RPS6KA5O75582 802 aa11.63□□□□□ -0.55
CHERP-201ENST00000198939 HMGB1P09429 215 aaKnown RBP11.63□□□□□ -0.55
CHERP-201ENST00000198939 SP8Q8IXZ3 490 aa11.63□□□□□ -0.55
CHERP-201ENST00000198939 C8orf76Q96K31 380 aa11.63□□□□□ -0.55
CHERP-201ENST00000198939 CDC23Q9UJX2 597 aa11.63□□□□□ -0.55
CHERP-201ENST00000198939 NRXN2Q9P2S2 1712 aa11.63□□□□□ -0.55
CHERP-201ENST00000198939 SHTN1A0MZ66 631 aa11.63□□□□□ -0.55
CHERP-201ENST00000198939 PFKFB2O60825 505 aa11.63□□□□□ -0.55
CHERP-201ENST00000198939 NCAPHQ15003 741 aa11.63□□□□□ -0.55
CHERP-201ENST00000198939 DALRD3Q5D0E6 543 aaKnown RBP11.63□□□□□ -0.55
CHERP-201ENST00000198939 RNF187Q5TA31 235 aaPredicted RBP11.63□□□□□ -0.55
CHERP-201ENST00000198939 SUGP1Q8IWZ8 645 aaKnown RBP11.63□□□□□ -0.55
CHERP-201ENST00000198939 SUPT20HQ8NEM7 779 aa11.63□□□□□ -0.55
CHERP-201ENST00000198939 CRACR2AQ9BSW2 395 aa11.63□□□□□ -0.55
CHERP-201ENST00000198939 RTEL1Q9NZ71 1219 aa11.63□□□□□ -0.55
CHERP-201ENST00000198939 CTAGE9A4FU28 777 aa11.63□□□□□ -0.55
CHERP-201ENST00000198939 CPLX1O14810 134 aa11.63□□□□□ -0.55
CHERP-201ENST00000198939 PPEF1O14829 653 aaPredicted RBP11.63□□□□□ -0.55
CHERP-201ENST00000198939 TAF5LO75529 589 aa11.63□□□□□ -0.55
CHERP-201ENST00000198939 MARCKSP29966 332 aaPredicted RBP11.63□□□□□ -0.55
CHERP-201ENST00000198939 PTPN12Q05209 780 aaKnown RBP11.63□□□□□ -0.55
CHERP-201ENST00000198939 OTUD7BQ6GQQ9 843 aa11.63□□□□□ -0.55
CHERP-201ENST00000198939 PPFIBP1Q86W92 1011 aa11.63□□□□□ -0.55
CHERP-201ENST00000198939 CPLX3Q8WVH0 158 aa11.63□□□□□ -0.55
CHERP-201ENST00000198939 IRX2Q9BZI1 471 aaPredicted RBP11.63□□□□□ -0.55
CHERP-201ENST00000198939 CLIC4Q9Y696 253 aa11.63□□□□□ -0.55
CHERP-201ENST00000198939 METTL24Q5JXM2 366 aa11.62□□□□□ -0.55
CHERP-201ENST00000198939 GBP6Q6ZN66 633 aa11.62□□□□□ -0.55
CHERP-201ENST00000198939 SMARCC2Q8TAQ2 1214 aa11.62□□□□□ -0.55
CHERP-201ENST00000198939 CEP89Q96ST8 783 aa11.62□□□□□ -0.55
CHERP-201ENST00000198939 HOOK1Q9UJC3 728 aaKnown RBP11.62□□□□□ -0.55
CHERP-201ENST00000198939 RNF40O75150 1001 aa11.62□□□□□ -0.55
CHERP-201ENST00000198939 TUBBP07437 444 aa11.62□□□□□ -0.55
CHERP-201ENST00000198939 PSEN1P49768 467 aa11.62□□□□□ -0.55
CHERP-201ENST00000198939 LINC00301Q8NCQ3 95 aa11.62□□□□□ -0.55
CHERP-201ENST00000198939 L1RE1Q9UN81 338 aa11.62□□□□□ -0.55
CHERP-201ENST00000198939 DPEP1P16444 411 aa11.62□□□□□ -0.55
CHERP-201ENST00000198939 RFX5P48382 616 aaPredicted RBP11.62□□□□□ -0.55
CHERP-201ENST00000198939 TSR1Q2NL82 804 aaKnown RBP11.62□□□□□ -0.55
CHERP-201ENST00000198939 DHX32Q7L7V1 743 aaKnown RBP11.62□□□□□ -0.55
CHERP-201ENST00000198939 EAF2Q96CJ1 260 aaPredicted RBP11.62□□□□□ -0.55
CHERP-201ENST00000198939 GPR108Q9NPR9 543 aa11.62□□□□□ -0.55
CHERP-201ENST00000198939 SEC31BQ9NQW1 1179 aa11.62□□□□□ -0.55
CHERP-201ENST00000198939 PFKFB1P16118 471 aa11.61□□□□□ -0.55
CHERP-201ENST00000198939 NF2P35240 595 aa11.61□□□□□ -0.55
CHERP-201ENST00000198939 SPECC1LQ69YQ0 1117 aa11.61□□□□□ -0.55
CHERP-201ENST00000198939 CEP57Q86XR8 500 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms