RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 KCNJ6P48051 423 aa12.62□□□□□ -0.39
ACTN1-201ENST00000193403 RNASE9P60153 205 aaKnown RBP12.62□□□□□ -0.39
ACTN1-201ENST00000193403 SND1Q7KZF4 910 aaKnown RBP eCLIP12.62□□□□□ -0.395e-7■□□□□ 8.3
ACTN1-201ENST00000193403 ZSWIM5Q9P217 1185 aa12.62□□□□□ -0.39
ACTN1-201ENST00000193403 PXDNQ92626 1479 aa12.62□□□□□ -0.39
ACTN1-201ENST00000193403 EIF3CLB5ME19 914 aaKnown RBP12.61□□□□□ -0.39
ACTN1-201ENST00000193403 PDE6AP16499 860 aa12.61□□□□□ -0.39
ACTN1-201ENST00000193403 BMP6P22004 513 aa12.61□□□□□ -0.39
ACTN1-201ENST00000193403 FXR1P51114 621 aaKnown RBP eCLIP12.61□□□□□ -0.39
ACTN1-201ENST00000193403 FOXO4P98177 505 aa12.61□□□□□ -0.39
ACTN1-201ENST00000193403 SPATA1Q5VX52 437 aa12.61□□□□□ -0.39
ACTN1-201ENST00000193403 FAM76AQ8TAV0 307 aa12.61□□□□□ -0.39
ACTN1-201ENST00000193403 TMEM87BQ96K49 555 aa12.61□□□□□ -0.39
ACTN1-201ENST00000193403 EIF3CQ99613 913 aaKnown RBP12.61□□□□□ -0.39
ACTN1-201ENST00000193403 ATP2C2O75185 946 aa12.61□□□□□ -0.39
ACTN1-201ENST00000193403 SPA17Q15506 151 aa12.61□□□□□ -0.39
ACTN1-201ENST00000193403 CYP26C1Q6V0L0 522 aa12.61□□□□□ -0.39
ACTN1-201ENST00000193403 UIMC1Q96RL1 719 aa12.61□□□□□ -0.39
ACTN1-201ENST00000193403 GOLGA6CA6NDK9 693 aa12.61□□□□□ -0.39
ACTN1-201ENST00000193403 EBAG9O00559 213 aa12.61□□□□□ -0.39
ACTN1-201ENST00000193403 MFAP3LO75121 409 aa12.61□□□□□ -0.39
ACTN1-201ENST00000193403 GOLGA6DP0CG33 693 aa12.61□□□□□ -0.39
ACTN1-201ENST00000193403 MCAMP43121 646 aa12.61□□□□□ -0.39
ACTN1-201ENST00000193403 TMTC1Q8IUR5 882 aa12.61□□□□□ -0.39
ACTN1-201ENST00000193403 TEX13AQ9BXU3 409 aaPredicted RBP12.61□□□□□ -0.39
ACTN1-201ENST00000193403 GOLGA6AQ9NYA3 693 aa12.61□□□□□ -0.39
ACTN1-201ENST00000193403 SF3A3Q12874 501 aaKnown RBP eCLIP12.6□□□□□ -0.394e-7■■■■■ 34.5
ACTN1-201ENST00000193403 PIK3AP1Q6ZUJ8 805 aa12.6□□□□□ -0.39
ACTN1-201ENST00000193403 PIH1D3Q9NQM4 214 aaKnown RBP12.6□□□□□ -0.39
ACTN1-201ENST00000193403 SAMM50Q9Y512 469 aa12.6□□□□□ -0.39
ACTN1-201ENST00000193403 UTYO14607 1347 aa12.6□□□□□ -0.39
ACTN1-201ENST00000193403 ABL1P00519 1130 aa12.6□□□□□ -0.39
ACTN1-201ENST00000193403 STAT6P42226 847 aa12.6□□□□□ -0.39
ACTN1-201ENST00000193403 TTF1Q15361 905 aaPredicted RBP12.6□□□□□ -0.39
ACTN1-201ENST00000193403 RABL6Q3YEC7 729 aaPredicted RBP12.6□□□□□ -0.39
ACTN1-201ENST00000193403 NELFBQ8WX92 580 aa12.6□□□□□ -0.39
ACTN1-201ENST00000193403 VAT1LQ9HCJ6 419 aa12.6□□□□□ -0.39
ACTN1-201ENST00000193403 DEXIO95424 95 aa12.6□□□□□ -0.39
ACTN1-201ENST00000193403 ATP1A2P50993 1020 aa12.6□□□□□ -0.39
ACTN1-201ENST00000193403 PTPAQ15257 358 aa12.6□□□□□ -0.39
ACTN1-201ENST00000193403 CCDC178Q5BJE1 867 aa12.6□□□□□ -0.39
ACTN1-201ENST00000193403 FAM71BQ8TC56 605 aa12.6□□□□□ -0.39
ACTN1-201ENST00000193403 HSD3B7Q9H2F3 369 aa12.6□□□□□ -0.39
ACTN1-201ENST00000193403 KRT2P35908 639 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 KCNQ4P56696 695 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 CYP27A1Q02318 531 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 PAK1Q13153 545 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 TDRD12Q587J7 1177 aaKnown RBP12.59□□□□□ -0.39
ACTN1-201ENST00000193403 SDR42E1Q8WUS8 393 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 ANKARQ7Z5J8 1434 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 NBPF26B4DH59 902 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 TOM1O60784 492 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 MMP1P03956 469 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 NBPF14Q5TI25 921 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 NBPF10Q6P3W6 841 aaKnown RBP12.59□□□□□ -0.39
ACTN1-201ENST00000193403 RSRC2Q7L4I2 434 aaKnown RBP12.59□□□□□ -0.39
ACTN1-201ENST00000193403 NBPF15Q8N660 670 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 ANKRD13CQ8N6S4 541 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 CCDC47Q96A33 483 aaKnown RBP12.59□□□□□ -0.39
ACTN1-201ENST00000193403 CHP1Q99653 195 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 KRT23Q9C075 422 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 GREM2Q9H772 168 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 JRKLQ9Y4A0 524 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 SAR1BQ9Y6B6 198 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 EPN1Q9Y6I3 576 aaPredicted RBP12.59□□□□□ -0.39
ACTN1-201ENST00000193403 GOLGA6BA6NDN3 693 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 KCNJ18B7U540 433 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 CYP7A1P22680 504 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 MORC3Q14149 939 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 KCNJ12Q14500 433 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 WHAMMP3Q1A5X7 153 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 BEND6Q5SZJ8 279 aaPredicted RBP12.59□□□□□ -0.39
ACTN1-201ENST00000193403 KCTD16Q68DU8 428 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 CATIPQ7Z7H3 387 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 IFNL3Q8IZI9 196 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 ZNF654Q8IZM8 581 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 JAKMIP2Q96AA8 810 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 KIFC2Q96AC6 838 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 AGXT2Q9BYV1 514 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 ANKZF1Q9H8Y5 726 aa12.59□□□□□ -0.39
ACTN1-201ENST00000193403 H7C1W4 665 aa12.58□□□□□ -0.39
ACTN1-201ENST00000193403 CYP27B1O15528 508 aa12.58□□□□□ -0.39
ACTN1-201ENST00000193403 KRT86O43790 486 aa12.58□□□□□ -0.39
ACTN1-201ENST00000193403 AKR1B10O60218 316 aa12.58□□□□□ -0.39
ACTN1-201ENST00000193403 STARD3NLO95772 234 aa12.58□□□□□ -0.39
ACTN1-201ENST00000193403 PTPREP23469 700 aa12.58□□□□□ -0.39
ACTN1-201ENST00000193403 C2orf54Q08AI8 447 aa12.58□□□□□ -0.39
ACTN1-201ENST00000193403 KRT31Q15323 416 aa12.58□□□□□ -0.39
ACTN1-201ENST00000193403 IFIT1BQ5T764 474 aaKnown RBP12.58□□□□□ -0.39
ACTN1-201ENST00000193403 PPM1EQ8WY54 764 aa12.58□□□□□ -0.39
ACTN1-201ENST00000193403 IFT81Q8WYA0 676 aa12.58□□□□□ -0.39
ACTN1-201ENST00000193403 BCCIPQ9P287 314 aaKnown RBP eCLIP12.58□□□□□ -0.39
ACTN1-201ENST00000193403 PALLDQ8WX93 1383 aa12.58□□□□□ -0.39
ACTN1-201ENST00000193403 TECPR2O15040 1411 aa12.58□□□□□ -0.4
ACTN1-201ENST00000193403 CXCR5P32302 372 aa12.58□□□□□ -0.4
ACTN1-201ENST00000193403 AKNAD1Q5T1N1 836 aa12.58□□□□□ -0.4
ACTN1-201ENST00000193403 IQUBQ8NA54 791 aa12.58□□□□□ -0.4
ACTN1-201ENST00000193403 CTCFLQ8NI51 663 aaPredicted RBP12.58□□□□□ -0.4
ACTN1-201ENST00000193403 ZCRB1Q8TBF4 217 aaKnown RBP12.58□□□□□ -0.4
ACTN1-201ENST00000193403 BCAS4Q8TDM0 211 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms