RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 PTPAQ15257 358 aa16.54■□□□□ 0.24
RTFDC1-201ENST00000023939 DIS3L2Q8IYB7 885 aaKnown RBP16.54■□□□□ 0.24
RTFDC1-201ENST00000023939 CMTR1Q8N1G2 835 aaKnown RBP16.54■□□□□ 0.24
RTFDC1-201ENST00000023939 MRPS27Q92552 414 aaKnown RBP16.54■□□□□ 0.24
RTFDC1-201ENST00000023939 TEKT1Q969V4 418 aa16.54■□□□□ 0.24
RTFDC1-201ENST00000023939 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.54■□□□□ 0.24
RTFDC1-201ENST00000023939 MORC2Q9Y6X9 1032 aaPredicted RBP16.54■□□□□ 0.24
RTFDC1-201ENST00000023939 PLIN4Q96Q06 1357 aa16.54■□□□□ 0.24
RTFDC1-201ENST00000023939 WDHD1O75717 1129 aaPredicted RBP16.53■□□□□ 0.24
RTFDC1-201ENST00000023939 GNAQP50148 359 aa16.53■□□□□ 0.24
RTFDC1-201ENST00000023939 GABPAQ06546 454 aa16.53■□□□□ 0.24
RTFDC1-201ENST00000023939 KIAA2012Q0VF49 1180 aa16.53■□□□□ 0.24
RTFDC1-201ENST00000023939 GRM4Q14833 912 aa16.53■□□□□ 0.24
RTFDC1-201ENST00000023939 SF3A1Q15459 793 aaKnown RBP16.53■□□□□ 0.24
RTFDC1-201ENST00000023939 DACT2Q5SW24 774 aa16.53■□□□□ 0.24
RTFDC1-201ENST00000023939 SRBD1Q8N5C6 995 aaKnown RBP16.53■□□□□ 0.24
RTFDC1-201ENST00000023939 JMYQ8N9B5 988 aa16.53■□□□□ 0.24
RTFDC1-201ENST00000023939 SLC44A5Q8NCS7 719 aa16.53■□□□□ 0.24
RTFDC1-201ENST00000023939 PDLIM2Q96JY6 352 aa16.53■□□□□ 0.24
RTFDC1-201ENST00000023939 ZDHHC15Q96MV8 337 aa16.53■□□□□ 0.24
RTFDC1-201ENST00000023939 GOLPH3LQ9H4A5 285 aa16.53■□□□□ 0.24
RTFDC1-201ENST00000023939 TAOK2Q9UL54 1235 aa16.53■□□□□ 0.24
RTFDC1-201ENST00000023939 V9GY48 417 aaPredicted RBP16.53■□□□□ 0.24
RTFDC1-201ENST00000023939 MYO3BQ8WXR4 1341 aa16.53■□□□□ 0.24
RTFDC1-201ENST00000023939 MYH1P12882 1939 aa16.53■□□□□ 0.24
RTFDC1-201ENST00000023939 BTBD18B2RXH4 712 aa16.53■□□□□ 0.24
RTFDC1-201ENST00000023939 RILPL1Q5EBL4 403 aa16.53■□□□□ 0.24
RTFDC1-201ENST00000023939 AXDND1Q5T1B0 1012 aaPredicted RBP16.53■□□□□ 0.24
RTFDC1-201ENST00000023939 APOBEC3HQ6NTF7 200 aaKnown RBP16.53■□□□□ 0.24
RTFDC1-201ENST00000023939 CCDC82Q8N4S0 544 aa16.53■□□□□ 0.24
RTFDC1-201ENST00000023939 PNMA1Q8ND90 353 aa16.53■□□□□ 0.24
RTFDC1-201ENST00000023939 FBXW7Q969H0 707 aa16.53■□□□□ 0.24
RTFDC1-201ENST00000023939 PHF20Q9BVI0 1012 aa16.53■□□□□ 0.24
RTFDC1-201ENST00000023939 ZNF646O15015 1829 aaPredicted RBP16.52■□□□□ 0.24
RTFDC1-201ENST00000023939 ECE2O60344 883 aa16.52■□□□□ 0.24
RTFDC1-201ENST00000023939 CMA1P23946 247 aa16.52■□□□□ 0.24
RTFDC1-201ENST00000023939 SLC4A8Q2Y0W8 1093 aa16.52■□□□□ 0.24
RTFDC1-201ENST00000023939 FMR1NBQ8N0W7 255 aaPredicted RBP16.52■□□□□ 0.24
RTFDC1-201ENST00000023939 FSIP1Q8NA03 581 aa16.52■□□□□ 0.24
RTFDC1-201ENST00000023939 DBNDD1Q9H9R9 158 aa16.52■□□□□ 0.24
RTFDC1-201ENST00000023939 KCNJ14Q9UNX9 436 aa16.52■□□□□ 0.24
RTFDC1-201ENST00000023939 FAM237AA0A1B0GTK4 181 aa16.51■□□□□ 0.23
RTFDC1-201ENST00000023939 USP17L3A6NCW0 530 aa16.51■□□□□ 0.23
RTFDC1-201ENST00000023939 USP17L4A6NCW7 530 aa16.51■□□□□ 0.23
RTFDC1-201ENST00000023939 NPM3O75607 178 aaKnown RBP16.51■□□□□ 0.23
RTFDC1-201ENST00000023939 CDC42EP5Q6NZY7 148 aa16.51■□□□□ 0.23
RTFDC1-201ENST00000023939 USP17L1Q7RTZ2 530 aa16.51■□□□□ 0.23
RTFDC1-201ENST00000023939 FAM177A1Q8N128 213 aaPredicted RBP16.51■□□□□ 0.23
RTFDC1-201ENST00000023939 SHISA4Q96DD7 197 aa16.51■□□□□ 0.23
RTFDC1-201ENST00000023939 LZTS2Q9BRK4 669 aa16.51■□□□□ 0.23
RTFDC1-201ENST00000023939 MXD3Q9BW11 206 aa16.51■□□□□ 0.23
RTFDC1-201ENST00000023939 USP40Q9NVE5 1235 aa16.51■□□□□ 0.23
RTFDC1-201ENST00000023939 F8W031 263 aaPredicted RBP16.5■□□□□ 0.23
RTFDC1-201ENST00000023939 KINO60870 393 aaKnown RBP16.5■□□□□ 0.23
RTFDC1-201ENST00000023939 CRKP46108 304 aa16.5■□□□□ 0.23
RTFDC1-201ENST00000023939 CAMK4Q16566 473 aa16.5■□□□□ 0.23
RTFDC1-201ENST00000023939 PFKFB3Q16875 520 aaPredicted RBP16.5■□□□□ 0.23
RTFDC1-201ENST00000023939 RNF214Q8ND24 703 aa16.5■□□□□ 0.23
RTFDC1-201ENST00000023939 TMEM47Q9BQJ4 181 aa16.5■□□□□ 0.23
RTFDC1-201ENST00000023939 SWAP70Q9UH65 585 aa16.5■□□□□ 0.23
RTFDC1-201ENST00000023939 MYH6P13533 1939 aa16.5■□□□□ 0.23
RTFDC1-201ENST00000023939 CAVIN2O95810 425 aa16.5■□□□□ 0.23
RTFDC1-201ENST00000023939 SCG2P13521 617 aa16.5■□□□□ 0.23
RTFDC1-201ENST00000023939 TOB1P50616 345 aaPredicted RBP16.5■□□□□ 0.23
RTFDC1-201ENST00000023939 TYRO3Q06418 890 aa16.5■□□□□ 0.23
RTFDC1-201ENST00000023939 DEFB132Q7Z7B7 95 aa16.5■□□□□ 0.23
RTFDC1-201ENST00000023939 OSBPL5Q9H0X9 879 aaPredicted RBP16.5■□□□□ 0.23
RTFDC1-201ENST00000023939 DDX4Q9NQI0 724 aaKnown RBP16.5■□□□□ 0.23
RTFDC1-201ENST00000023939 SH3GLB2Q9NR46 395 aa16.5■□□□□ 0.23
RTFDC1-201ENST00000023939 PALM3A6NDB9 673 aaPredicted RBP16.49■□□□□ 0.23
RTFDC1-201ENST00000023939 TOP1P11387 765 aaKnown RBP16.49■□□□□ 0.23
RTFDC1-201ENST00000023939 SMARCA1P28370 1054 aa16.49■□□□□ 0.23
RTFDC1-201ENST00000023939 KRT2P35908 639 aa16.49■□□□□ 0.23
RTFDC1-201ENST00000023939 SCNN1DP51172 638 aa16.49■□□□□ 0.23
RTFDC1-201ENST00000023939 RTKN2Q8IZC4 609 aa16.49■□□□□ 0.23
RTFDC1-201ENST00000023939 TTLL6Q8N841 843 aa16.49■□□□□ 0.23
RTFDC1-201ENST00000023939 PDGFDQ9GZP0 370 aaPredicted RBP16.49■□□□□ 0.23
RTFDC1-201ENST00000023939 EHD4Q9H223 541 aa16.49■□□□□ 0.23
RTFDC1-201ENST00000023939 KCNQ5Q9NR82 932 aa16.49■□□□□ 0.23
RTFDC1-201ENST00000023939 VPS54Q9P1Q0 977 aa16.49■□□□□ 0.23
RTFDC1-201ENST00000023939 MAD2L2Q9UI95 211 aa16.49■□□□□ 0.23
RTFDC1-201ENST00000023939 SERPINA10Q9UK55 444 aa16.49■□□□□ 0.23
RTFDC1-201ENST00000023939 MRVI1Q9Y6F6 885 aa16.49■□□□□ 0.23
RTFDC1-201ENST00000023939 CUTAO60888 179 aa16.48■□□□□ 0.23
RTFDC1-201ENST00000023939 NPY5RQ15761 445 aa16.48■□□□□ 0.23
RTFDC1-201ENST00000023939 TNFRSF25Q93038 417 aa16.48■□□□□ 0.23
RTFDC1-201ENST00000023939 PSMD1Q99460 953 aa16.48■□□□□ 0.23
RTFDC1-201ENST00000023939 IDI2Q9BXS1 227 aa16.48■□□□□ 0.23
RTFDC1-201ENST00000023939 VPS33BQ9H267 617 aa16.48■□□□□ 0.23
RTFDC1-201ENST00000023939 BRMS1Q9HCU9 246 aa16.48■□□□□ 0.23
RTFDC1-201ENST00000023939 SCN9AQ15858 1988 aa16.48■□□□□ 0.23
RTFDC1-201ENST00000023939 IGKV6D-41A0A0C4DH26 115 aa16.48■□□□□ 0.23
RTFDC1-201ENST00000023939 NDUFA8P51970 172 aa16.48■□□□□ 0.23
RTFDC1-201ENST00000023939 NR5A1Q13285 461 aa16.48■□□□□ 0.23
RTFDC1-201ENST00000023939 AOC3Q16853 763 aa16.48■□□□□ 0.23
RTFDC1-201ENST00000023939 CCDC93Q567U6 631 aa16.48■□□□□ 0.23
RTFDC1-201ENST00000023939 CCDC125Q86Z20 511 aa16.48■□□□□ 0.23
RTFDC1-201ENST00000023939 CKAP2LQ8IYA6 745 aa16.48■□□□□ 0.23
RTFDC1-201ENST00000023939 FAM200AQ8TCP9 573 aa16.48■□□□□ 0.23
RTFDC1-201ENST00000023939 OXER1Q8TDS5 423 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms