RNA–Protein interactions for RNA: ENST00000013034.3

NME1-201, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3 BASIC

Gene NME1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-201ENST00000013034 USP17L20D6RJB6 530 aa13.65□□□□□ -0.22
NME1-201ENST00000013034 USP14P54578 494 aa13.65□□□□□ -0.22
NME1-201ENST00000013034 USP17L24Q0WX57 530 aa13.65□□□□□ -0.22
NME1-201ENST00000013034 TNNI3KQ59H18 835 aa13.65□□□□□ -0.22
NME1-201ENST00000013034 EDC3Q96F86 508 aaKnown RBP13.65□□□□□ -0.22
NME1-201ENST00000013034 ZNF512BQ96KM6 892 aaPredicted RBP13.65□□□□□ -0.22
NME1-201ENST00000013034 LBHD1Q9BQE6 289 aaPredicted RBP13.65□□□□□ -0.22
NME1-201ENST00000013034 FPGT-TNNI3KV9GXZ4 949 aa13.65□□□□□ -0.22
NME1-201ENST00000013034 CDK5RAP2Q96SN8 1893 aa13.64□□□□□ -0.23
NME1-201ENST00000013034 CNMDO75829 334 aa13.64□□□□□ -0.23
NME1-201ENST00000013034 GH2P01242 217 aa13.64□□□□□ -0.23
NME1-201ENST00000013034 CYP2E1P05181 493 aaPredicted RBP13.64□□□□□ -0.23
NME1-201ENST00000013034 HOXC6P09630 235 aa13.64□□□□□ -0.23
NME1-201ENST00000013034 POTEEQ6S8J3 1075 aa13.64□□□□□ -0.23
NME1-201ENST00000013034 LBX2Q6XYB7 198 aa13.64□□□□□ -0.23
NME1-201ENST00000013034 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.64□□□□□ -0.23
NME1-201ENST00000013034 EHD4Q9H223 541 aa13.64□□□□□ -0.23
NME1-201ENST00000013034 SNRKQ9NRH2 765 aa13.64□□□□□ -0.23
NME1-201ENST00000013034 DDX20Q9UHI6 824 aaKnown RBP13.64□□□□□ -0.23
NME1-201ENST00000013034 SAP30BPQ9UHR5 308 aaKnown RBP13.64□□□□□ -0.23
NME1-201ENST00000013034 IVNS1ABPQ9Y6Y0 642 aa13.64□□□□□ -0.23
NME1-201ENST00000013034 ZNF236Q9UL36 1845 aa13.63□□□□□ -0.23
NME1-201ENST00000013034 POTEB2H3BUK9 544 aa13.63□□□□□ -0.23
NME1-201ENST00000013034 DNM1LO00429 736 aa13.63□□□□□ -0.23
NME1-201ENST00000013034 IPO8O15397 1037 aaKnown RBP13.63□□□□□ -0.23
NME1-201ENST00000013034 TRIM27P14373 513 aa13.63□□□□□ -0.23
NME1-201ENST00000013034 VCAM1P19320 739 aa13.63□□□□□ -0.23
NME1-201ENST00000013034 PTPREP23469 700 aa13.63□□□□□ -0.23
NME1-201ENST00000013034 GRB14Q14449 540 aa13.63□□□□□ -0.23
NME1-201ENST00000013034 ZYXQ15942 572 aaKnown RBP13.63□□□□□ -0.23
NME1-201ENST00000013034 TATDN1Q6P1N9 297 aa13.63□□□□□ -0.23
NME1-201ENST00000013034 LPAR1Q92633 364 aa13.63□□□□□ -0.23
NME1-201ENST00000013034 GUCD1Q96NT3 240 aa13.63□□□□□ -0.23
NME1-201ENST00000013034 DBNDD2Q9BQY9 259 aa13.63□□□□□ -0.23
NME1-201ENST00000013034 KIAA1683Q9H0B3 1180 aa13.63□□□□□ -0.23
NME1-201ENST00000013034 PRKAG2Q9UGJ0 569 aa13.63□□□□□ -0.23
NME1-201ENST00000013034 UNC80Q8N2C7 3258 aa13.63□□□□□ -0.23
NME1-201ENST00000013034 ZAP70P43403 619 aa13.62□□□□□ -0.23
NME1-201ENST00000013034 ZNF697Q5TEC3 545 aa13.62□□□□□ -0.23
NME1-201ENST00000013034 WDR78Q5VTH9 848 aa13.62□□□□□ -0.23
NME1-201ENST00000013034 TMED8Q6PL24 325 aaPredicted RBP13.62□□□□□ -0.23
NME1-201ENST00000013034 CATSPERGQ6ZRH7 1159 aa13.62□□□□□ -0.23
NME1-201ENST00000013034 COL25A1Q9BXS0 654 aaPredicted RBP13.62□□□□□ -0.23
NME1-201ENST00000013034 SENP6Q9GZR1 1112 aaPredicted RBP13.62□□□□□ -0.23
NME1-201ENST00000013034 FLRT1Q9NZU1 646 aa13.62□□□□□ -0.23
NME1-201ENST00000013034 SERPINB13Q9UIV8 391 aa13.62□□□□□ -0.23
NME1-201ENST00000013034 SPDYE16A6NNV3 312 aaPredicted RBP13.61□□□□□ -0.23
NME1-201ENST00000013034 CYBAP13498 195 aa13.61□□□□□ -0.23
NME1-201ENST00000013034 CYP7A1P22680 504 aa13.61□□□□□ -0.23
NME1-201ENST00000013034 RTP1P59025 263 aa13.61□□□□□ -0.23
NME1-201ENST00000013034 DYNLL1P63167 89 aaKnown RBP13.61□□□□□ -0.23
NME1-201ENST00000013034 ATP2B2Q01814 1243 aa13.61□□□□□ -0.23
NME1-201ENST00000013034 OS9Q13438 667 aaPredicted RBP13.61□□□□□ -0.23
NME1-201ENST00000013034 POLA2Q14181 598 aa13.61□□□□□ -0.23
NME1-201ENST00000013034 PIH1D3Q9NQM4 214 aaKnown RBP13.61□□□□□ -0.23
NME1-201ENST00000013034 LTBP2Q14767 1821 aa13.61□□□□□ -0.23
NME1-201ENST00000013034 CNGA1P29973 690 aa13.6□□□□□ -0.23
NME1-201ENST00000013034 USP5P45974 858 aa13.6□□□□□ -0.23
NME1-201ENST00000013034 IRX6P78412 446 aaPredicted RBP13.6□□□□□ -0.23
NME1-201ENST00000013034 AAMPQ13685 434 aa13.6□□□□□ -0.23
NME1-201ENST00000013034 RAB3GAP1Q15042 981 aa13.6□□□□□ -0.23
NME1-201ENST00000013034 TTC6Q86TZ1 520 aa13.6□□□□□ -0.23
NME1-201ENST00000013034 CCDC136Q96JN2 1154 aa13.6□□□□□ -0.23
NME1-201ENST00000013034 CABP5Q9NP86 173 aa13.6□□□□□ -0.23
NME1-201ENST00000013034 BTBD7Q9P203 1132 aa13.6□□□□□ -0.23
NME1-201ENST00000013034 NDUFB9Q9Y6M9 179 aa13.6□□□□□ -0.23
NME1-201ENST00000013034 KBTBD13C9JR72 458 aa13.59□□□□□ -0.23
NME1-201ENST00000013034 IDH1O75874 414 aaKnown RBP13.59□□□□□ -0.23
NME1-201ENST00000013034 IGHA2P01877 340 aa13.59□□□□□ -0.23
NME1-201ENST00000013034 CYP2C19P33261 490 aa13.59□□□□□ -0.23
NME1-201ENST00000013034 ATN1P54259 1190 aaPredicted RBP13.59□□□□□ -0.23
NME1-201ENST00000013034 ABCB5Q2M3G0 1257 aa13.59□□□□□ -0.23
NME1-201ENST00000013034 CERKLQ49MI3 558 aaPredicted RBP13.59□□□□□ -0.23
NME1-201ENST00000013034 OLFML2BQ68BL8 750 aa13.59□□□□□ -0.23
NME1-201ENST00000013034 MIGA1Q8NAN2 632 aa13.59□□□□□ -0.23
NME1-201ENST00000013034 NPLOC4Q8TAT6 608 aa13.59□□□□□ -0.23
NME1-201ENST00000013034 SSH3Q8TE77 659 aa13.59□□□□□ -0.23
NME1-201ENST00000013034 RPAP3Q9H6T3 665 aaPredicted RBP13.59□□□□□ -0.23
NME1-201ENST00000013034 DBNLQ9UJU6 430 aaKnown RBP13.59□□□□□ -0.23
NME1-201ENST00000013034 A0A0G2JMZ2 1700 aa13.59□□□□□ -0.23
NME1-201ENST00000013034 ARRDC4Q8NCT1 418 aa13.58□□□□□ -0.24
NME1-201ENST00000013034 SHCBP1Q8NEM2 672 aa13.58□□□□□ -0.24
NME1-201ENST00000013034 TRPV1Q8NER1 839 aa13.58□□□□□ -0.24
NME1-201ENST00000013034 ACER1Q8TDN7 264 aa13.58□□□□□ -0.24
NME1-201ENST00000013034 FRAT1Q92837 279 aaPredicted RBP13.58□□□□□ -0.24
NME1-201ENST00000013034 FAM161BQ96MY7 647 aa13.58□□□□□ -0.24
NME1-201ENST00000013034 TLR7Q9NYK1 1049 aaKnown RBP13.58□□□□□ -0.24
NME1-201ENST00000013034 TNNQ9UQP3 1299 aa13.58□□□□□ -0.24
NME1-201ENST00000013034 ATP11BQ9Y2G3 1177 aa13.58□□□□□ -0.24
NME1-201ENST00000013034 MYH1P12882 1939 aa13.57□□□□□ -0.24
NME1-201ENST00000013034 STRNO43815 780 aa13.57□□□□□ -0.24
NME1-201ENST00000013034 SURF6O75683 361 aaKnown RBP13.57□□□□□ -0.24
NME1-201ENST00000013034 ADORA2AP29274 412 aa13.57□□□□□ -0.24
NME1-201ENST00000013034 SHMT1P34896 483 aa13.57□□□□□ -0.24
NME1-201ENST00000013034 MAP3K12Q12852 859 aa13.57□□□□□ -0.24
NME1-201ENST00000013034 SNX17Q15036 470 aa13.57□□□□□ -0.24
NME1-201ENST00000013034 DPP9Q86TI2 863 aa13.57□□□□□ -0.24
NME1-201ENST00000013034 MAGEB6Q8N7X4 407 aa13.57□□□□□ -0.24
NME1-201ENST00000013034 CLUAP1Q96AJ1 413 aa13.57□□□□□ -0.24
NME1-201ENST00000013034 SLC5A4Q9NY91 659 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms