RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 KIF9Q9HAQ2 790 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 METTL14Q9HCE5 456 aaKnown RBP6.7□□□□□ -1.34
VPS13D-201ENST00000011700 KDM2BQ8NHM5 1336 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 ARHGEF11O15085 1522 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 TTC4O95801 387 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 INPP1P49441 399 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 LRRC8BQ6P9F7 803 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 RUFY3Q7L099 469 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 HEATR3Q7Z4Q2 680 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 EXOC6BQ9Y2D4 811 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 HYOU1Q9Y4L1 999 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 MYH14Q7Z406 1995 aaKnown RBP6.7□□□□□ -1.34
VPS13D-201ENST00000011700 hCG_1984214I3L0E3 225 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 BCAR3O75815 825 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 ATF7P17544 494 aaPredicted RBP6.7□□□□□ -1.34
VPS13D-201ENST00000011700 STRN3Q13033 797 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 LDHAL6AQ6ZMR3 332 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 WDR46O15213 610 aaKnown RBP6.7□□□□□ -1.34
VPS13D-201ENST00000011700 VSIG1Q86XK7 387 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 SLFN12Q8IYM2 578 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 MTMR7Q9Y216 660 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 CCDC88AQ3V6T2 1871 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 TOM1O60784 492 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 NR1I2O75469 434 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 HCLS1P14317 486 aaPredicted RBP6.7□□□□□ -1.34
VPS13D-201ENST00000011700 SND1Q7KZF4 910 aaKnown RBP eCLIP6.7□□□□□ -1.34
VPS13D-201ENST00000011700 JPH2Q9BR39 696 aaPredicted RBP6.7□□□□□ -1.34
VPS13D-201ENST00000011700 SLC26A6Q9BXS9 759 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 PALM3A6NDB9 673 aaPredicted RBP6.7□□□□□ -1.34
VPS13D-201ENST00000011700 E9PMD0 336 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 SUN1O94901 812 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 CCDC78A2IDD5 438 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 SPOPO43791 374 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 RANBP1P43487 201 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 BLMP54132 1417 aaPredicted RBP6.7□□□□□ -1.34
VPS13D-201ENST00000011700 KIAA0556O60303 1618 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 PPP1R12AO14974 1030 aaPredicted RBP6.7□□□□□ -1.34
VPS13D-201ENST00000011700 KIF1CO43896 1103 aaKnown RBP6.7□□□□□ -1.34
VPS13D-201ENST00000011700 RFC1P35251 1148 aaPredicted RBP6.7□□□□□ -1.34
VPS13D-201ENST00000011700 COG7P83436 770 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 RPS6KA2Q15349 733 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 NLRP7Q8WX94 980 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 SECISBP2LQ93073 1101 aaKnown RBP6.7□□□□□ -1.34
VPS13D-201ENST00000011700 SCINQ9Y6U3 715 aa6.7□□□□□ -1.34
VPS13D-201ENST00000011700 DNM2P50570 870 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 KMT5BQ4FZB7 885 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 OTUD6AQ7L8S5 288 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 ARHGEF2Q92974 986 aaKnown RBP6.69□□□□□ -1.34
VPS13D-201ENST00000011700 RPS6KC1Q96S38 1066 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 ANKRD44Q8N8A2 993 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 LRRC37BQ96QE4 947 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 SAR1BQ9Y6B6 198 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 MAN1A2O60476 641 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 GARSP41250 739 aaKnown RBP6.69□□□□□ -1.34
VPS13D-201ENST00000011700 PSMD7P51665 324 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 ALCAMQ13740 583 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 ZKSCAN8Q15776 578 aaPredicted RBP6.69□□□□□ -1.34
VPS13D-201ENST00000011700 BOLA2Q9H3K6 86 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 PAG1Q9NWQ8 432 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 ANGEL1Q9UNK9 670 aaKnown RBP6.69□□□□□ -1.34
VPS13D-201ENST00000011700 PARD3Q8TEW0 1356 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 SKIP12755 728 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 CD109Q6YHK3 1445 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 TSPOAP1O95153 1857 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 TTC37Q6PGP7 1564 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 SERPINB2P05120 415 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 XRCC5P13010 732 aaKnown RBP6.69□□□□□ -1.34
VPS13D-201ENST00000011700 SERPINB10P48595 397 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 CLNS1AP54105 237 aaKnown RBP6.69□□□□□ -1.34
VPS13D-201ENST00000011700 NOP14P78316 857 aaKnown RBP6.69□□□□□ -1.34
VPS13D-201ENST00000011700 CDC37Q16543 378 aaPredicted RBP6.69□□□□□ -1.34
VPS13D-201ENST00000011700 ANKRD13DQ6ZTN6 518 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 IFT81Q8WYA0 676 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 TMX3Q96JJ7 454 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 SELENOSQ9BQE4 189 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 ESYT1Q9BSJ8 1104 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 ZRANB1Q9UGI0 708 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 RBM6P78332 1123 aaKnown RBP6.69□□□□□ -1.34
VPS13D-201ENST00000011700 HHATQ5VTY9 493 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 SATB2Q9UPW6 733 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 RGS16O15492 202 aaPredicted RBP6.69□□□□□ -1.34
VPS13D-201ENST00000011700 TEDDM1Q5T9Z0 273 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 NUTM2GQ5VZR2 741 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 CATSPER1Q8NEC5 780 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 MTRQ99707 1265 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 RASGRF2O14827 1237 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 IGSF3O75054 1194 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 RASSF7Q02833 373 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 NBPF20Q3BBV1 942 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 PARP10Q53GL7 1025 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 RABGGTAQ92696 567 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 AK8Q96MA6 479 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 NLRP3Q96P20 1036 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 TM6SF1Q9BZW5 370 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 PASKQ96RG2 1323 aa6.69□□□□□ -1.34
VPS13D-201ENST00000011700 POLD1P28340 1107 aa6.68□□□□□ -1.34
VPS13D-201ENST00000011700 XPCQ01831 940 aaPredicted RBP6.68□□□□□ -1.34
VPS13D-201ENST00000011700 RINT1Q6NUQ1 792 aa6.68□□□□□ -1.34
VPS13D-201ENST00000011700 DTNBP1Q96EV8 351 aa6.68□□□□□ -1.34
VPS13D-201ENST00000011700 DENND2AQ9ULE3 1009 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms