RNA–Protein interactions for RNA: ENSMUST00000210789.1

Prpf40a-208, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40a, Length 3,773 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-208ENSMUST00000210789 Gm15023L7MUB4 467 aa9.95□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Lmnb1P14733 588 aaKnown RBP9.95□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Pdha1P35486 390 aaKnown RBP9.95□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Ccdc172Q810N9 267 aa9.95□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Q8BWG4 1187 aa9.95□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 NapgQ9CWZ7 312 aa9.95□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Mrps9Q9D7N3 390 aaKnown RBP9.95□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Tceal9Q9DD24 104 aa9.95□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Sec24cG3X972 1096 aaKnown RBP9.95□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Rexo4Q6PAQ4 432 aaKnown RBP9.95□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Trim37Q6PCX9 961 aa9.95□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Nop9Q8BMC4 636 aaKnown RBP9.95□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Eif3bQ8JZQ9 803 aaKnown RBP9.95□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 AmotQ8VHG2 1126 aa9.95□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Stk38Q91VJ4 465 aa9.95□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Pcdha5Q91Y15 934 aa9.95□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Fam133bQ9CVI2 245 aaKnown RBP9.95□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Gpihbp1Q9D1N2 228 aa9.95□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Il27raO70394 623 aa9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Alox15P39654 663 aa9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Ccdc160Q3UYG1 323 aa9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 GlmnQ8BZM1 596 aa9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Mtmr3Q8K296 1196 aa9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Sash3Q8K352 380 aa9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Noc3lQ8VI84 807 aaKnown RBP9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Rnf123Q5XPI3 1314 aa9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Parp14Q2EMV9 1817 aa9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Gm21663A0A0G2JE01 267 aa9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Ugt1a5B2RT14 529 aa9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Gm7361D3Z6R1 267 aa9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 5031410I06RikE9Q4E0 267 aa9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Gm1979E9QAN3 267 aa9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Gm5862K7N5V5 267 aa9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Gm10220K7N660 267 aa9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Ets2P15037 468 aa9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Krt86P97861 486 aa9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Usp13Q5BKP2 858 aa9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 ChukQ60680 745 aa9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Arhgef1Q61210 920 aaKnown RBP9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Ddx11Q6AXC6 880 aa9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Tekt3Q6X6Z7 490 aa9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Add2Q9QYB8 725 aa9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Znf394Q9Z1D9 521 aa9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Fam47eD3YWC7 402 aa9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Nkx2-5P42582 318 aa9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Sv2bQ8BG39 683 aa9.94□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Znf541Q0GGX2 1363 aa9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 FscbA1EGX6 1074 aa9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Miga2Q8BK03 593 aa9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Ppp1r37Q8BKR5 712 aa9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Gpcpd1Q8C0L9 675 aa9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Tango6Q8C3S2 1079 aa9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Rassf8Q8CJ96 419 aa9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Spats2lQ91WJ7 558 aaKnown RBP9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 AdarQ99MU3 1178 aaKnown RBP9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Sept14Q9DA97 430 aa9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Akap8lQ9R0L7 642 aaKnown RBP9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Vstm4T1NXB5 319 aa9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Camta1A2A891 1682 aa9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Phactr1Q2M3X8 580 aa9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Trmt1Q3TX08 663 aa9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Sf3b2Q3UJB0 878 aaKnown RBP9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Rec8Q8C5S7 591 aa9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Nup133Q8R0G9 1155 aa9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Coq6Q8R1S0 476 aa9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Caap1Q8VDY9 356 aa9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Ybx3Q9JKB3 361 aaKnown RBP9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Gm28510A0A087WP28 240 aa9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Tpm3-rs7D3Z2H9 248 aa9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Gnai2P08752 355 aaKnown RBP9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Pold1P52431 1105 aa9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Cdr2P97817 455 aa9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Tcp11l2Q8K1H7 517 aa9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 SmtnQ921U8 923 aa9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Lrrc59Q922Q8 307 aaKnown RBP9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Nsmce1Q9D720 266 aa9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 GgcxQ9QYC7 757 aa9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Ak2Q9WTP6 239 aa9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Aox1O54754 1333 aa9.93□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Pet2A2AHY8 747 aa9.92□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Nck2O55033 380 aa9.92□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Bcl2l13P59017 434 aa9.92□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Tcp11Q01755 566 aa9.92□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Tax1bp1Q3UKC1 814 aaKnown RBP9.92□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Oxr1Q4KMM3 866 aa9.92□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Kctd19Q562E2 927 aa9.92□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 ClasrpQ8CFC7 668 aa9.92□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 MbipQ99LQ1 341 aa9.92□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Scrn1Q9CZC8 414 aa9.92□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Rsrc1Q9DBU6 334 aa9.92□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Clic4Q9QYB1 253 aa9.92□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Morc1Q9WVL5 950 aa9.92□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Tcof1O08784 1320 aaKnown RBP9.92□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Fkbp4P30416 458 aa9.92□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Kif5aP33175 1027 aa9.92□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Tmem109Q3UBX0 243 aa9.92□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Zfp202Q8C879 641 aa9.92□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Nup58Q8R332 587 aa9.92□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 CrebzfQ91ZR3 358 aa9.92□□□□□ -0.82
Prpf40a-208ENSMUST00000210789 Ino80bQ99PT3 375 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms