RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Epb41l2O70318 988 aaKnown RBP29.59■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Pfkfb1P70266 471 aa29.59■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Myo19Q5SV80 963 aa29.59■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Large2Q5XPT3 690 aa29.59■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Cyp7b1Q60991 507 aa29.59■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Yipf1Q91VU1 306 aa29.59■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Nop2Q922K7 793 aaKnown RBP29.59■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Dusp10Q9ESS0 483 aa29.59■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Ppef2O35385 757 aa29.59■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Npr3P70180 536 aa29.59■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Ccdc173A0JLY1 547 aa29.58■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Armc2Q3URY6 854 aa29.58■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Mars2Q499X9 586 aaKnown RBP29.58■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Slc10a5Q5PT54 434 aa29.58■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Ndufb9Q9CQJ8 179 aa29.58■■■□□ 2.33
Tpm1-216ENSMUST00000113707 Zscan25B2RX31 543 aa29.57■■■□□ 2.32
Tpm1-216ENSMUST00000113707 LdhaP06151 332 aaKnown RBP29.57■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Dpp8Q80YA7 892 aa29.57■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Mtmr4Q91XS1 1190 aa29.57■■■□□ 2.32
Tpm1-216ENSMUST00000113707 1700003F12RikA2AKE5 210 aa29.57■■■□□ 2.32
Tpm1-216ENSMUST00000113707 DSCC1Q14AI0 399 aa29.57■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Dnaaf2Q8BPI1 814 aa29.57■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Zfp202Q8C879 641 aa29.57■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Myh8P13542 1937 aa29.56■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Zfp646Q6NV66 1788 aa29.56■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Zkscan7E9PVW1 718 aa29.56■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Tmc4Q7TQ65 694 aa29.56■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Lca5Q80ST9 704 aa29.56■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Rec8Q8C5S7 591 aa29.56■■■□□ 2.32
Tpm1-216ENSMUST00000113707 OscarQ8VBT3 265 aa29.56■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Krt23Q99PS0 422 aa29.56■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Mtfr1lQ9CWE0 289 aa29.56■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Nsrp1Q5NCR9 542 aa29.55■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Ces3aQ63880 571 aa29.55■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Ccdc150Q8CDI7 1110 aa29.55■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Ces3bQ8VCU1 571 aa29.55■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Flt1P35969 1333 aa29.55■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Ccdc88aQ5SNZ0 1873 aa29.55■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Eddm13E9Q7F5 164 aa29.55■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Haus7Q8BKT8 364 aa29.55■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Gtf3c5Q8R2T8 520 aa29.55■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Lrrc15Q80X72 579 aa29.54■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Rbm19Q8R3C6 952 aaKnown RBP29.54■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Styxl1Q9DAR2 321 aa29.54■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Cyp26c1B2RXA7 518 aa29.53■■■□□ 2.32
Tpm1-216ENSMUST00000113707 A430078G23RikE9Q7Y4 484 aa29.53■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Nfil3O08750 462 aa29.53■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Stx1aO35526 288 aa29.53■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Dapk3O54784 448 aa29.53■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Rad23bP54728 416 aa29.53■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Tigd5Q499M4 642 aa29.53■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Mdh1bQ5F204 500 aa29.53■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Znrd1-asQ8R0E5 213 aa29.53■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Hic2Q9JLZ6 619 aaKnown RBP29.53■■■□□ 2.32
Tpm1-216ENSMUST00000113707 TicrrQ8BQ33 1889 aa29.53■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Cacnb3P54285 484 aa29.53■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Arhgef16Q3U5C8 713 aa29.53■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Prpf4bQ61136 1007 aaKnown RBP29.53■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Epha10Q8BYG9 1007 aa29.53■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Tfap4Q9JIZ5 338 aa29.53■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Plxnb2B2RXS4 1842 aa29.52■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Col2a1P28481 1487 aa29.52■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Cd2apQ9JLQ0 637 aa29.52■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Psmd10Q9Z2X2 231 aa29.52■■■□□ 2.32
Tpm1-216ENSMUST00000113707 Lbhd1A0A087WPA0 259 aa29.51■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Phldb3E9QAF4 648 aa29.51■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Slc27a3O88561 667 aa29.51■■■□□ 2.31
Tpm1-216ENSMUST00000113707 PparaP23204 468 aa29.51■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Glra4Q61603 456 aa29.51■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Grm4Q68EF4 912 aa29.51■■■□□ 2.31
Tpm1-216ENSMUST00000113707 PaoxQ8C0L6 504 aa29.51■■■□□ 2.31
Tpm1-216ENSMUST00000113707 MarcksP26645 309 aaKnown RBP29.51■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Galnt17Q7TT15 598 aa29.51■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Larp6Q8BN59 492 aa29.51■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Ttll1Q91V51 423 aa29.51■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Flvcr1B2RXV4 560 aa29.5■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Tex13cD3YU32 604 aa29.5■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Api5O35841 504 aaKnown RBP29.5■■■□□ 2.31
Tpm1-216ENSMUST00000113707 PrimpolQ6P1E7 537 aa29.5■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Nat10Q8K224 1024 aaKnown RBP29.5■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Hmx1O70218 332 aa29.49■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Tgfb2P27090 414 aa29.49■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Trappc10Q3TLI0 1259 aa29.49■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Plekha7Q3UIL6 1118 aaKnown RBP29.49■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Prl2c1Q5SVL9 228 aa29.49■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Znf653Q6YND2 615 aa29.49■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Ift74Q8BKE9 600 aa29.49■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Ppp1r11Q8K1L5 131 aa29.49■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Hexim1Q8R409 356 aaKnown RBP29.49■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Hip1rQ9JKY5 1068 aa29.49■■■□□ 2.31
Tpm1-216ENSMUST00000113707 GdaQ9R111 454 aa29.49■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Dnai2A2AC93 623 aa29.48■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Tas2r124Q7M718 309 aa29.48■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Myo1hQ9D6A1 958 aa29.48■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Ubxn8Q9QZ49 277 aa29.48■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Cfap157Q0VFX2 523 aa29.48■■■□□ 2.31
Tpm1-216ENSMUST00000113707 WaplQ65Z40 1200 aaKnown RBP29.48■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Kcnh3Q9WVJ0 1095 aa29.48■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Sycp2lA0A0M3U1B0 842 aa29.47■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Adcy5P84309 1262 aa29.47■■■□□ 2.31
Retrieved 100 of 22,080 RNA–protein pairs in 100.2 ms