RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 Edc3Q8K2D3 508 aaKnown RBP13.22□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Col25a1Q99MQ5 666 aa13.22□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 PfasQ5SUR0 1337 aa13.22□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Gm38655A0A286YDK6 273 aa13.22□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Fam186bD3Z420 943 aa13.22□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 E030030I06RikJ3QML9 246 aa13.22□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 TxnP10639 105 aaKnown RBP13.22□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Sept4P28661 478 aa13.22□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Atp8b2P98199 1209 aa13.22□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Tpd52Q62393 224 aa13.22□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Cyp24a1Q64441 514 aa13.22□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 KhnynQ80U38 671 aa13.22□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Dusp4Q8BFV3 398 aa13.22□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Aldh1l2Q8K009 923 aa13.22□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Pdcd6ipQ9WU78 869 aaKnown RBP13.22□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Abcc4E9Q236 1325 aa13.22□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Wfdc16A2A5H4 111 aa13.21□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Prr11Q8BHE0 368 aa13.21□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Tpcn2Q8BWC0 731 aa13.21□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Fam126bQ8C729 530 aa13.21□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Calhm4Q8CE93 315 aa13.21□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Dnajc17Q91WT4 303 aa13.21□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Sart3Q9JLI8 962 aaKnown RBP13.21□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 TnksQ6PFX9 1320 aa13.21□□□□□ -0.29
Ccdc60-202ENSMUST00000086483 Cyp2c29Q64458 490 aa13.21□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Rai14Q9EP71 979 aaKnown RBP13.21□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Wdr33Q8K4P0 1330 aaKnown RBP13.21□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Lamb2Q61292 1799 aa13.21□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Ssh1Q76I79 1042 aa13.2□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Slc18a1Q8R090 521 aa13.2□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Nploc4P60670 608 aa13.2□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Palb2Q3U0P1 1104 aa13.2□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Trim37Q6PCX9 961 aa13.2□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Ppp1r11Q8K1L5 131 aa13.2□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Krt25Q8VCW2 446 aa13.2□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Nlrc5C3VPR6 1915 aa13.19□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Naaladl2A0A0N4SUJ3 795 aa13.19□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Atp11aP98197 1187 aa13.19□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Aak1Q3UHJ0 959 aa13.19□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Prpf38aQ4FK66 312 aaKnown RBP13.19□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Pramel6Q810Y9 485 aa13.19□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Bud13Q8R149 637 aa13.19□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 HlcsQ920N2 722 aa13.19□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Bco2Q99NF1 532 aa13.19□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 NesQ6P5H2 1864 aaKnown RBP13.19□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Mybl2P48972 704 aa13.18□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Kcnn2P58390 839 aa13.18□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Dynll1P63168 89 aa13.18□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Brip1Q5SXJ3 1174 aa13.18□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Ecm1Q61508 559 aa13.18□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Pknox2Q8BG99 474 aa13.18□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 4930504O13RikQ8C5Z9 145 aa13.18□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Serpinb13Q8CDC0 389 aa13.18□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Ppil4Q9CXG3 492 aaKnown RBP13.18□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Mxra8Q9DBV4 442 aa13.18□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Vmn2r68L7N2B3 851 aa13.18□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 NfkbieO54910 364 aa13.18□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Scnn1aQ61180 699 aa13.18□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 DbnlQ62418 436 aa13.18□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Gigyf2Q6Y7W8 1291 aaKnown RBP13.18□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Srgap3Q812A2 1099 aa13.18□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Olfm5Q8BU90 496 aa13.18□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Dlk2Q8K1E3 382 aa13.18□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Ppp1r42Q8R1Z4 357 aa13.18□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Ak7Q9D2H2 614 aa13.18□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Cyp3a57D3YYZ0 503 aa13.17□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 NfiaQ02780 532 aa13.17□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Znf710Q3U288 666 aa13.17□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Filip1lQ6P6L0 1131 aa13.17□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 C2cd5Q7TPS5 1016 aaKnown RBP13.17□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Adgra1Q8C4G9 578 aa13.17□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Btbd7Q8CFE5 1130 aa13.17□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Capns2Q9D7J7 247 aa13.17□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 MvpQ9EQK5 861 aa13.17□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Bag3Q9JLV1 577 aaKnown RBP13.17□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Gp6P0C191 313 aa13.17□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 AcrP23578 436 aa13.17□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Ltv1Q6NSQ7 470 aaKnown RBP13.17□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Cypt4Q6P925 153 aa13.17□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Dennd4aE9Q8V6 1869 aa13.16□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Skint3A7TZF0 458 aa13.16□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Il17raQ60943 864 aa13.16□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Cachd1Q6PDJ1 1288 aa13.16□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Aox3G3X982 1335 aa13.16□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Obsl1D3YYU8 1804 aaKnown RBP13.16□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Otud7bB2RUR8 840 aa13.15□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Ccl26F8VQM2 93 aa13.15□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Mum1l1Q4VA55 681 aa13.15□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Ddx11Q6AXC6 880 aa13.15□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Mb21d2Q8C525 428 aa13.15□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Mrpl58Q8R035 206 aa13.15□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 PhipQ8VDD9 1821 aaKnown RBP13.15□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Mcoln1Q99J21 580 aa13.15□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Plxnb3Q9QY40 1902 aa13.15□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Il7P10168 154 aa13.15□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Art2aP17981 287 aa13.15□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 RarbP22605 482 aa13.15□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Miga1Q4QQM5 600 aa13.15□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Fam109aQ8BH49 266 aa13.15□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Defb15Q8R2I5 79 aa13.15□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 36.7 ms