RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Adgrl2Q8JZZ7 1487 aa10.36□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Eif4a1P60843 406 aaKnown RBP10.36□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Ppp1r7Q3UM45 361 aa10.36□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Ppp2r5bQ6PD28 497 aa10.36□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Unc5clQ6R653 518 aa10.36□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Klhl40Q9D783 621 aa10.36□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Abcc1O35379 1528 aa10.36□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Svs3aF2Z472 265 aa10.36□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Slc27a3O88561 667 aa10.36□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Slc12a2P55012 1205 aa10.36□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 AdkP55264 361 aa10.36□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Lig3P97386 1015 aa10.36□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Scyl2Q8CFE4 930 aa10.36□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Hspd1P63038 573 aaKnown RBP10.36□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 VrtnQ3SYK4 740 aa10.36□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 MpndQ3TV65 487 aa10.36□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Pcdha12Q91Y18 950 aa10.36□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Ttc14Q9CSP9 761 aa10.36□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Gkap1Q9JMB0 366 aa10.36□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Cnksr1A2A9K7 700 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Ccdc7Q9D541 371 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Prl3d1P18121 224 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Atp8a2P98200 1148 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Trim21Q62191 470 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Acot11Q8VHQ9 594 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Osbpl1aQ91XL9 950 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Thap12Q9CUX1 758 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Pdzd9Q9D9M4 266 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Rrbp1Q99PL5 1605 aaKnown RBP10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Sh2d4bA6X942 431 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Znf76Q8BMU0 568 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Dennd4bQ3U1Y4 1499 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Gdap1O88741 358 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Surf6P70279 355 aaKnown RBP10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 GabpaQ00422 454 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Nsun2Q1HFZ0 757 aaKnown RBP10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Camsap3Q80VC9 1252 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Efcab8Q8C9R9 203 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Nup58Q8R332 587 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Med10Q9CXU0 135 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Gli2Q0VGT2 1544 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Zfp597E9Q6S0 419 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Chl1P70232 1209 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Fhdc1Q3ULZ2 1149 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Lrrc43Q3V0L5 667 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Armcx3Q8BHS6 379 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Kdm5aQ3UXZ9 1690 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Zfp174B9EJW5 407 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Gm6583E9Q8Z1 469 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Xrcc6P23475 608 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Sem1P60897 70 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Gtpbp10Q8K013 366 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Atp2a1Q8R429 994 aa10.35□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Brpf3B2KF05 1204 aaKnown RBP10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Eef1bO70251 225 aaKnown RBP10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Psmc2P46471 433 aa10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Armc2Q3URY6 854 aa10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Krt39Q6IFX4 482 aa10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Retreg2Q6NS82 541 aa10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Slc7a6osQ7TPE5 306 aa10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Mei4Q8BRM6 389 aa10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 1700020D05RikQ99PB1 294 aa10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Gm20425E9Q035 978 aaKnown RBP10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 SrprbP47758 269 aa10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Dis3l2Q8CI75 870 aaKnown RBP10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Pard3Q99NH2 1333 aa10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Tdo2P48776 406 aa10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Stim2P83093 746 aa10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Spag7Q7TNE3 227 aaKnown RBP10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 C130026I21RikQ8C898 291 aa10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 4933428M09RikQ9D3X3 192 aa10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Foxo3Q9WVH4 672 aa10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Taf4E9QAP7 1042 aaKnown RBP10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Fam133bQ9CVI2 245 aaKnown RBP10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Myom2Q14BI5 1463 aa10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Sclt1G5E861 688 aa10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 EnahQ03173 802 aa10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Acot10Q32MW3 439 aa10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Nxf7Q80SZ6 620 aaKnown RBP10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 RbsnQ80Y56 783 aa10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Ncoa5Q91W39 579 aaKnown RBP10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Pcdhb2Q91Y00 799 aa10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Dbndd1Q9CZ00 160 aa10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Actn2Q9JI91 894 aa10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Trpc3Q9QZC1 836 aa10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Uhrf1bp1lA2RSJ4 1457 aa10.34□□□□□ -0.75
Prpf40a-201ENSMUST00000076313 Gm6121L7MUF1 212 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Nlrp1aQ2LKU9 1182 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Esyt2Q3TZZ7 845 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Gm5169Q5M8P2 212 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Ctdspl2Q8BG15 465 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Gpcpd1Q8C0L9 675 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Slain2Q8CI08 581 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Sh2b1Q91ZM2 756 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Card14Q99KF0 999 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 CutaQ9CQ89 177 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Cd2bp2Q9CWK3 342 aaKnown RBP10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Rnf40Q3U319 1001 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 Cnnm4Q69ZF7 771 aa10.33□□□□□ -0.76
Prpf40a-201ENSMUST00000076313 D130040H23RikQ8BII3 405 aa10.33□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms