RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 Myef2Q8C854 591 aaKnown RBP13.67□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Ttc27Q8CD92 847 aa13.67□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Tex9Q9D845 387 aa13.67□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Tsc1Q9EP53 1161 aa13.67□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Tshz1Q5DTH5 1084 aa13.67□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Cacna2d2Q6PHS9 1154 aa13.67□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Bzw2Q91VK1 419 aaKnown RBP13.67□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Gpbp1Q6NXH3 473 aaKnown RBP13.67□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Fchsd1Q6PFY1 688 aa13.67□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Plcd3Q8K2J0 785 aa13.67□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Dzip3Q7TPV2 1204 aa13.67□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Nrbf2Q8VCQ3 287 aa13.67□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Card14Q99KF0 999 aa13.67□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Tcp1P11983 556 aaKnown RBP13.67□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Rad23aP54726 363 aa13.67□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Fam83gQ5SWY7 812 aa13.67□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Klhl40Q9D783 621 aa13.67□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Nfil3O08750 462 aa13.66□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 C1qbpO35658 278 aa13.66□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Dync1i2O88487 612 aaKnown RBP13.66□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Cep85Q8BMK0 761 aa13.66□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Prl3d2F6R3P9 224 aa13.66□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Krt12Q64291 487 aa13.66□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Bicc1Q99MQ1 977 aaKnown RBP13.66□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Eid1Q9DCR4 169 aa13.66□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 MgarpQ8VI64 283 aa13.66□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Kcnk16G5E845 292 aa13.66□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Osbpl1aQ91XL9 950 aa13.66□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Abcc6Q9R1S7 1498 aa13.66□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Zfp94E9Q6Y4 486 aa13.66□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Ift81O35594 676 aa13.66□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Klhl7Q8BUL5 586 aa13.66□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Actn4P57780 912 aaKnown RBP13.66□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Ccnt1Q9QWV9 724 aaKnown RBP13.66□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Plb1Q3TTY0 1478 aa13.66□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Cul7Q8VE73 1689 aa13.66□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 PcQ05920 1178 aa13.66□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Trim21Q62191 470 aa13.66□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Setd1bQ8CFT2 1985 aa13.66□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Gm30191A0A0U1RNT7 187 aa13.65□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Gm29094F6Q785 221 aa13.65□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Ccnl1Q52KE7 532 aaKnown RBP13.65□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Ptcd1Q8C2E4 695 aaKnown RBP13.65□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 CutaQ9CQ89 177 aa13.65□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 EsrrgP62509 458 aa13.65□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Gm4981Q3ULJ8 291 aa13.65□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Stxbp3Q60770 592 aa13.65□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Pcdhb5Q91XZ5 792 aa13.65□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Proca1B0QZF7 307 aa13.65□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Wdr44Q6NVE8 915 aa13.65□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Gimap5Q8BWF2 308 aa13.65□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 LpxnQ99N69 386 aa13.65□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Mtmr7Q9Z2C9 660 aa13.65□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Ppp1r7Q3UM45 361 aa13.65□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Slc30a9Q5IRJ6 567 aa13.65□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Sall3Q62255 1320 aa13.65□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Mmp8O70138 465 aa13.65□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 GnpatP98192 678 aa13.65□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Nlrx1Q3TL44 975 aa13.65□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Haus6Q6NV99 933 aaKnown RBP13.65□□□□□ -0.22
Vcpip1-201ENSMUST00000057438 Ftl1P29391 183 aa13.65□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Fam170aQ66LM6 333 aa13.65□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Irs4Q9Z0Y7 1216 aa13.65□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Wdr17E9Q271 1322 aa13.65□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Gm14525B1AZA0 212 aa13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Gm2012B1B0R1 212 aa13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 TsksO54887 585 aa13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Gm14819Q62478 212 aa13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Dzip1Q8BMD2 852 aa13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Rbm41Q8JZV4 413 aa13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Appbp2Q9DAX9 585 aa13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Dab2P98078 766 aa13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Mier3Q3UHF3 551 aa13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Eif4g3Q80XI3 1579 aaKnown RBP13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Il4rP16382 810 aa13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Serpinb13Q8CDC0 389 aa13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Trim71Q1PSW8 855 aaKnown RBP13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Tbc1d9bQ5SVR0 1263 aa13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Tnip3A0A1D5RMN0 279 aa13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Ccdc50Q810U5 305 aaKnown RBP13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Xpo5Q924C1 1204 aaKnown RBP13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 RabggtaQ9JHK4 567 aa13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Atp10dQ8K2X1 1416 aa13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Abcc4E9Q236 1325 aa13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Cabcoco1Q8CDT7 208 aa13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Med10Q9CXU0 135 aa13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Acsl3Q9CZW4 720 aaKnown RBP13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Kpna2P52293 529 aaKnown RBP13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Lrrc8aQ80WG5 810 aa13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Efcab14Q8BGQ6 484 aa13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Utp11Q9CZJ1 253 aaKnown RBP13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Gm6588E9Q3K0 461 aa13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Psmc2P46471 433 aa13.64□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 RragaQ80X95 313 aa13.63□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Tmtc1Q3UV71 942 aa13.63□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Herc4Q6PAV2 1057 aa13.63□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Arhgap4B1AUY3 965 aa13.63□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Irx1P81068 480 aa13.63□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Bach2P97303 839 aa13.63□□□□□ -0.23
Vcpip1-201ENSMUST00000057438 Ppp6r3Q922D4 844 aa13.63□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 164 ms