RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Plbd2Q3TCN2 594 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Iqcb1Q8BP00 598 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Pm20d1Q8C165 503 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 NelfbQ8C4Y3 580 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Tpd52l2Q9CYZ2 220 aaKnown RBP10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Znf652Q5DU09 608 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Ccdc68Q8BVC4 333 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Kif2bQ8C0N1 668 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Card14Q99KF0 999 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Xpo4Q9ESJ0 1151 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Gbp6A0A0G2JDV3 611 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Zfp597E9Q6S0 419 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Gm43302L7N1X8 611 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 FosP01101 380 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Surf1P09925 306 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 H2afzP0C0S6 128 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Prl3d1P18121 224 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Ctnna1P26231 906 aaKnown RBP10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 H2afvQ3THW5 128 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 PaoxQ8C0L6 504 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 MgarpQ8VI64 283 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Rabep2Q91WG2 554 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Basp1Q91XV3 226 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Dnajc10Q9DC23 793 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Gdpd2Q9ESM6 539 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Hfm1D3Z4R1 1434 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Talpid3E9PV87 1520 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Trmt10cQ3UFY8 414 aaKnown RBP10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Gm4981Q3ULJ8 291 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Krt9Q6RHW0 743 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 GopcQ8BH60 463 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Bag2Q91YN9 210 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Ivns1abpQ920Q8 642 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Stx17Q9D0I4 301 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Ccnt1Q9QWV9 724 aaKnown RBP10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Ppfia4B8QI36 1187 aa10.08□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Card6E9PWH2 1175 aa10.08□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Pfdn4Q3UWL8 134 aa10.08□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Gm10488Q4KL05 212 aa10.08□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Atp1a2Q6PIE5 1020 aa10.08□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 B4galnt4Q766D5 1034 aa10.08□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Nlrp5Q9R1M5 1163 aa10.08□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Eif4g1Q6NZJ6 1600 aaKnown RBP10.08□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Tpx2A2APB8 745 aaKnown RBP10.08□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Akap5D3YVF0 745 aa10.08□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Tspyl1O88852 379 aa10.08□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Znf667Q2TL60 609 aa10.08□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Zfp51Q3U4L8 781 aa10.08□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Arhgap17Q3UIA2 846 aa10.08□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 6820408C15RikQ8BJX2 354 aa10.08□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Haus6Q6NV99 933 aaKnown RBP10.08□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Vat1lQ80TB8 417 aa10.08□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 CutaQ9CQ89 177 aa10.08□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Myl7Q9QVP4 175 aa10.08□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 PalldQ9ET54 1408 aa10.08□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Nom1Q3UFM5 854 aaKnown RBP10.08□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Tshz1Q5DTH5 1084 aa10.08□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Tmem132eQ6IEE6 982 aa10.08□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Cul4bA2A432 970 aaKnown RBP10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 CopeO89079 308 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Psmb7P70195 277 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Atp8b1Q148W0 1251 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 SpertQ32MG2 446 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Acot10Q32MW3 439 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Syne3Q4FZC9 975 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Mtrf1lQ8BJU9 373 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Nrbf2Q8VCQ3 287 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Tmem132aQ922P8 1018 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 FibpQ9JI19 357 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Pard3Q99NH2 1333 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 InsrrQ9WTL4 1300 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Eya1P97767 591 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Myo1gQ5SUA5 1024 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Serpinb1cQ5SV42 375 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Snx14Q8BHY8 964 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Nsmce1Q9D720 266 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Tsc1Q9EP53 1161 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Ror2Q9Z138 944 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Lrrc36Q3V0M2 755 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Srrm1Q52KI8 946 aaKnown RBP10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Khdrbs1Q60749 443 aaKnown RBP10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Q6PD19 689 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 AmphQ7TQF7 686 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Kctd6Q8BNL5 237 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Ccdc87Q8CDL9 855 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 LgsnQ8CIX8 563 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Kif9Q9WV04 790 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Flot1O08917 428 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Pja2Q80U04 707 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Nuf2Q99P69 463 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Ankrd2Q9WV06 328 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Frmpd4A2AFR3 1320 aa10.07□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Dnajc25A2ALW5 357 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Rabgap1A2AWA9 1064 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Ca8P28651 291 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Cct5P80316 541 aaKnown RBP10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Pram1Q6BCL1 675 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Rab3gap1Q80UJ7 981 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 RragaQ80X95 313 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Klhl7Q8BUL5 586 aa10.06□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms