RNA–Protein interactions for RNA: ENSMUST00000200829.3

Scn2a-205, Transcript of Sodium channel protein, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn2a, Length 6,348 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2a-205ENSMUST00000200829 Lce1a2Q9D1K4 149 aa2.9□□□□□ -1.95
Scn2a-205ENSMUST00000200829 Gm7544A0A1Y7VJ58 118 aa2.89□□□□□ -1.95
Scn2a-205ENSMUST00000200829 Fat4Q2PZL6 4981 aa2.88□□□□□ -1.95
Scn2a-205ENSMUST00000200829 Abca13Q5SSE9 5034 aa2.87□□□□□ -1.95
Scn2a-205ENSMUST00000200829 A030005K14RikA0A1Y7VNY1 122 aa2.87□□□□□ -1.95
Scn2a-205ENSMUST00000200829 Gm11564A2A4L9 201 aa2.87□□□□□ -1.95
Scn2a-205ENSMUST00000200829 Gm11563B1AQ90 168 aa2.87□□□□□ -1.95
Scn2a-205ENSMUST00000200829 Gm11595B1AQA7 289 aa2.87□□□□□ -1.95
Scn2a-205ENSMUST00000200829 Krtap4-8B1AQA8 209 aa2.87□□□□□ -1.95
Scn2a-205ENSMUST00000200829 Mdn1A2ANY6 5589 aaKnown RBP2.86□□□□□ -1.95
Scn2a-205ENSMUST00000200829 A030005L19RikA0A1Y7VIU2 113 aa2.86□□□□□ -1.95
Scn2a-205ENSMUST00000200829 ZanO88799 5376 aa2.86□□□□□ -1.95
Scn2a-205ENSMUST00000200829 Krtap4-9B1AQA9 244 aa2.82□□□□□ -1.96
Scn2a-205ENSMUST00000200829 Muc5bE9Q5I3 4800 aa2.82□□□□□ -1.96
Scn2a-205ENSMUST00000200829 2300003K06RikA2A4M0 262 aa2.81□□□□□ -1.96
Scn2a-205ENSMUST00000200829 Ubr4A2AN08 5180 aa2.81□□□□□ -1.96
Scn2a-205ENSMUST00000200829 Krtap4-7Q9D732 168 aa2.79□□□□□ -1.96
Scn2a-205ENSMUST00000200829 Krtap4-13Q9D7P3 165 aa2.75□□□□□ -1.97
Scn2a-205ENSMUST00000200829 Krtap17-1A2A5X6 109 aa2.72□□□□□ -1.97
Scn2a-205ENSMUST00000200829 Krtap31-2Q8CAY5 177 aa2.72□□□□□ -1.97
Scn2a-205ENSMUST00000200829 Gm11562A0PK51 136 aa2.71□□□□□ -1.98
Scn2a-205ENSMUST00000200829 Ush2AQ2QI47 5193 aa2.71□□□□□ -1.98
Scn2a-205ENSMUST00000200829 Gm11938Q9D3H4 131 aa2.7□□□□□ -1.98
Scn2a-205ENSMUST00000200829 A030014E15RikA0A1Y7VJV2 120 aa2.69□□□□□ -1.98
Scn2a-205ENSMUST00000200829 Syne2Q6ZWQ0 6874 aaKnown RBP2.69□□□□□ -1.98
Scn2a-205ENSMUST00000200829 Rnf213E9Q555 5152 aaKnown RBP2.68□□□□□ -1.98
Scn2a-205ENSMUST00000200829 Lce1kJ3QP15 125 aa2.67□□□□□ -1.98
Scn2a-205ENSMUST00000200829 Hmcn2A2AJ76 5100 aa2.67□□□□□ -1.98
Scn2a-205ENSMUST00000200829 Krtap6-3A0A087WQL6 57 aa2.62□□□□□ -1.99
Scn2a-205ENSMUST00000200829 Sprr2dO70555 85 aa2.62□□□□□ -1.99
Scn2a-205ENSMUST00000200829 Mt3P28184 68 aa2.6□□□□□ -1.99
Scn2a-205ENSMUST00000200829 Krtap31-1Q9D644 177 aa2.6□□□□□ -1.99
Scn2a-205ENSMUST00000200829 Sprr2hO70559 108 aa2.6□□□□□ -1.99
Scn2a-205ENSMUST00000200829 SspoQ8CG65 4998 aa2.58□□□□□ -2
Scn2a-205ENSMUST00000200829 Lce1a1Q9CQH5 143 aa2.58□□□□□ -2
Scn2a-205ENSMUST00000200829 Fsip2A2ARZ3 6995 aa2.57□□□□□ -2
Scn2a-205ENSMUST00000200829 Gm11554B1AQB2 190 aa2.44□□□□□ -2.02
Scn2a-205ENSMUST00000200829 Syne1Q6ZWR6 8799 aa2.42□□□□□ -2.02
Scn2a-205ENSMUST00000200829 Mt1P02802 61 aaKnown RBP2.38□□□□□ -2.03
Scn2a-205ENSMUST00000200829 Krtap20-2E9Q0A8 60 aa2.38□□□□□ -2.03
Scn2a-205ENSMUST00000200829 Eppk1Q8R0W0 6548 aa2.31□□□□□ -2.04
Scn2a-205ENSMUST00000200829 Gm11555B1AQ89 175 aa2.29□□□□□ -2.04
Scn2a-205ENSMUST00000200829 Krtap4-16Q91W93 202 aa2.26□□□□□ -2.05
Scn2a-205ENSMUST00000200829 Sprr2bO70554 98 aa2.25□□□□□ -2.05
Scn2a-205ENSMUST00000200829 ObscnA2AAJ9 8891 aaKnown RBP2.19□□□□□ -2.06
Scn2a-205ENSMUST00000200829 A0A286YCP9 139 aa2.1□□□□□ -2.07
Scn2a-205ENSMUST00000200829 DstQ91ZU6 7393 aaKnown RBP2.06□□□□□ -2.08
Scn2a-205ENSMUST00000200829 Kmt2dQ6PDK2 5588 aa2.06□□□□□ -2.08
Scn2a-205ENSMUST00000200829 Macf1Q9QXZ0 7354 aaKnown RBP2□□□□□ -2.09
Scn2a-205ENSMUST00000200829 Gm11559Q9D3H7 191 aa1.98□□□□□ -2.09
Scn2a-205ENSMUST00000200829 NebE9Q1W3 7152 aa1.97□□□□□ -2.09
Scn2a-205ENSMUST00000200829 Muc16A0A140LJ72 8478 aa1.96□□□□□ -2.09
Scn2a-205ENSMUST00000200829 1110025L11RikO09048 78 aa1.95□□□□□ -2.1
Scn2a-205ENSMUST00000200829 Krtap6-5Q925H3 78 aa1.95□□□□□ -2.1
Scn2a-205ENSMUST00000200829 Gm11568A2A4M2 211 aa1.92□□□□□ -2.1
Scn2a-205ENSMUST00000200829 Krtap9-1Q64526 186 aa1.92□□□□□ -2.1
Scn2a-205ENSMUST00000200829 Gm10229O08631 77 aa1.85□□□□□ -2.11
Scn2a-205ENSMUST00000200829 Gm11639A0A1D5RLM8 5808 aa1.8□□□□□ -2.12
Scn2a-205ENSMUST00000200829 Krtap5-2Q9D5Z7 189 aa1.77□□□□□ -2.13
Scn2a-205ENSMUST00000200829 Gpr98Q8VHN7 6298 aaKnown RBP1.75□□□□□ -2.13
Scn2a-205ENSMUST00000200829 Muc19Q6PZE0 7524 aa1.69□□□□□ -2.14
Scn2a-205ENSMUST00000200829 Gm4553A0A1B0GSA9 284 aa1.68□□□□□ -2.14
Scn2a-205ENSMUST00000200829 Phgr1Q8K0G7 91 aa1.63□□□□□ -2.15
Scn2a-205ENSMUST00000200829 Hmcn1D3YXG0 5634 aa1.63□□□□□ -2.15
Scn2a-205ENSMUST00000200829 Gm2431E9Q8S1 172 aa1.58□□□□□ -2.16
Scn2a-205ENSMUST00000200829 AhnakE9Q616 5656 aaKnown RBP1.51□□□□□ -2.17
Scn2a-205ENSMUST00000200829 Krtap6-2O08884 159 aa1.49□□□□□ -2.17
Scn2a-205ENSMUST00000200829 Gm10153A0A1B0GRL1 320 aa1.49□□□□□ -2.17
Scn2a-205ENSMUST00000200829 Gm45337A0A1B0GS71 263 aa1.46□□□□□ -2.18
Scn2a-205ENSMUST00000200829 Gm45618A0A1B0GSA0 219 aa1.45□□□□□ -2.18
Scn2a-205ENSMUST00000200829 Gm40460A0A1B0GR10 244 aa1.44□□□□□ -2.18
Scn2a-205ENSMUST00000200829 Gm7579A0A1B0GRJ4 243 aa1.44□□□□□ -2.18
Scn2a-205ENSMUST00000200829 Krtap5-5Q2TA51 241 aa1.44□□□□□ -2.18
Scn2a-205ENSMUST00000200829 Krtap5-4Q62220 223 aa1.44□□□□□ -2.18
Scn2a-205ENSMUST00000200829 Krtap21-1Q925H4 128 aa1.38□□□□□ -2.19
Scn2a-205ENSMUST00000200829 Gm39115A0A1B0GSH7 232 aa1.35□□□□□ -2.19
Scn2a-205ENSMUST00000200829 Gm11567Q9D141 195 aa1.29□□□□□ -2.2
Scn2a-205ENSMUST00000200829 Gm29735A0A1B0GT06 219 aa1.24□□□□□ -2.21
Scn2a-205ENSMUST00000200829 Gm4559A4IF42 199 aa1.02□□□□□ -2.25
Scn2a-205ENSMUST00000200829 Krtap5-1Q64507 230 aa0.99□□□□□ -2.25
Retrieved 80 of 22,080 RNA–protein pairs in 81.7 ms