RNA–Protein interactions for RNA: ENSMUST00000199896.1

Smarcc1-207, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,773 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-207ENSMUST00000199896 Gm11563B1AQ90 168 aa5,49□□□□□ -1,53
Smarcc1-207ENSMUST00000199896 Gm11595B1AQA7 289 aa5,49□□□□□ -1,53
Smarcc1-207ENSMUST00000199896 Krtap4-8B1AQA8 209 aa5,49□□□□□ -1,53
Smarcc1-207ENSMUST00000199896 2300003K06RikA2A4M0 262 aa5,49□□□□□ -1,53
Smarcc1-207ENSMUST00000199896 Krtap4-9B1AQA9 244 aa5,48□□□□□ -1,53
Smarcc1-207ENSMUST00000199896 ZanO88799 5376 aa5,45□□□□□ -1,54
Smarcc1-207ENSMUST00000199896 Krtap4-7Q9D732 168 aa5,43□□□□□ -1,54
Smarcc1-207ENSMUST00000199896 Krtap17-1A2A5X6 109 aa5,4□□□□□ -1,54
Smarcc1-207ENSMUST00000199896 Rnf213E9Q555 5152 aaKnown RBP5,39□□□□□ -1,55
Smarcc1-207ENSMUST00000199896 Fsip2A2ARZ3 6995 aa5,36□□□□□ -1,55
Smarcc1-207ENSMUST00000199896 Krtap4-13Q9D7P3 165 aa5,35□□□□□ -1,55
Smarcc1-207ENSMUST00000199896 Muc5bE9Q5I3 4800 aa5,34□□□□□ -1,56
Smarcc1-207ENSMUST00000199896 Gm11562A0PK51 136 aa5,32□□□□□ -1,56
Smarcc1-207ENSMUST00000199896 Lce1kJ3QP15 125 aa5,28□□□□□ -1,56
Smarcc1-207ENSMUST00000199896 Hmcn2A2AJ76 5100 aa5,23□□□□□ -1,57
Smarcc1-207ENSMUST00000199896 Ush2AQ2QI47 5193 aa5,22□□□□□ -1,57
Smarcc1-207ENSMUST00000199896 Krtap31-1Q9D644 177 aa5,21□□□□□ -1,58
Smarcc1-207ENSMUST00000199896 Gm11938Q9D3H4 131 aa5,19□□□□□ -1,58
Smarcc1-207ENSMUST00000199896 Sprr2hO70559 108 aa5,19□□□□□ -1,58
Smarcc1-207ENSMUST00000199896 Syne2Q6ZWQ0 6874 aaKnown RBP5,14□□□□□ -1,59
Smarcc1-207ENSMUST00000199896 Sprr2dO70555 85 aa5,14□□□□□ -1,59
Smarcc1-207ENSMUST00000199896 Mt3P28184 68 aa5,06□□□□□ -1,6
Smarcc1-207ENSMUST00000199896 Lce1a1Q9CQH5 143 aa4,98□□□□□ -1,61
Smarcc1-207ENSMUST00000199896 Muc16A0A140LJ72 8478 aa4,92□□□□□ -1,62
Smarcc1-207ENSMUST00000199896 Krtap6-3A0A087WQL6 57 aa4,85□□□□□ -1,63
Smarcc1-207ENSMUST00000199896 SspoQ8CG65 4998 aa4,85□□□□□ -1,63
Smarcc1-207ENSMUST00000199896 Gm11554B1AQB2 190 aa4,84□□□□□ -1,63
Smarcc1-207ENSMUST00000199896 Krtap4-16Q91W93 202 aa4,82□□□□□ -1,64
Smarcc1-207ENSMUST00000199896 Sprr2bO70554 98 aa4,64□□□□□ -1,67
Smarcc1-207ENSMUST00000199896 Krtap20-2E9Q0A8 60 aa4,63□□□□□ -1,67
Smarcc1-207ENSMUST00000199896 Mt1P02802 61 aaKnown RBP4,58□□□□□ -1,68
Smarcc1-207ENSMUST00000199896 Macf1Q9QXZ0 7354 aaKnown RBP4,57□□□□□ -1,68
Smarcc1-207ENSMUST00000199896 ObscnA2AAJ9 8891 aaKnown RBP4,57□□□□□ -1,68
Smarcc1-207ENSMUST00000199896 NebE9Q1W3 7152 aa4,31□□□□□ -1,72
Smarcc1-207ENSMUST00000199896 DstQ91ZU6 7393 aaKnown RBP4,3□□□□□ -1,72
Smarcc1-207ENSMUST00000199896 Eppk1Q8R0W0 6548 aa4,24□□□□□ -1,73
Smarcc1-207ENSMUST00000199896 Kmt2dQ6PDK2 5588 aa4,22□□□□□ -1,73
Smarcc1-207ENSMUST00000199896 Krtap31-2Q8CAY5 177 aa4,14□□□□□ -1,75
Smarcc1-207ENSMUST00000199896 Gm11555B1AQ89 175 aa4,13□□□□□ -1,75
Smarcc1-207ENSMUST00000199896 Muc19Q6PZE0 7524 aa4,01□□□□□ -1,77
Smarcc1-207ENSMUST00000199896 1110025L11RikO09048 78 aa3,8□□□□□ -1,8
Smarcc1-207ENSMUST00000199896 Krtap6-5Q925H3 78 aa3,8□□□□□ -1,8
Smarcc1-207ENSMUST00000199896 Gm11559Q9D3H7 191 aa3,65□□□□□ -1,82
Smarcc1-207ENSMUST00000199896 Gm10229O08631 77 aa3,61□□□□□ -1,83
Smarcc1-207ENSMUST00000199896 Gm11568A2A4M2 211 aa3,6□□□□□ -1,83
Smarcc1-207ENSMUST00000199896 Krtap9-1Q64526 186 aa3,6□□□□□ -1,83
Smarcc1-207ENSMUST00000199896 Gm11639A0A1D5RLM8 5808 aa3,51□□□□□ -1,85
Smarcc1-207ENSMUST00000199896 Gpr98Q8VHN7 6298 aaKnown RBP3,5□□□□□ -1,85
Smarcc1-207ENSMUST00000199896 Phgr1Q8K0G7 91 aa3,36□□□□□ -1,87
Smarcc1-207ENSMUST00000199896 Hmcn1D3YXG0 5634 aa3,23□□□□□ -1,89
Smarcc1-207ENSMUST00000199896 Krtap5-2Q9D5Z7 189 aa3,15□□□□□ -1,91
Smarcc1-207ENSMUST00000199896 Gm4553A0A1B0GSA9 284 aa2,97□□□□□ -1,93
Smarcc1-207ENSMUST00000199896 Krtap6-2O08884 159 aa2,92□□□□□ -1,94
Smarcc1-207ENSMUST00000199896 A0A1Y7VJH8 109 aa2,88□□□□□ -1,95
Smarcc1-207ENSMUST00000199896 Gm10153A0A1B0GRL1 320 aa2,87□□□□□ -1,95
Smarcc1-207ENSMUST00000199896 Gm2431E9Q8S1 172 aa2,82□□□□□ -1,96
Smarcc1-207ENSMUST00000199896 A0A1Y7VLE6 161 aa2,82□□□□□ -1,96
Smarcc1-207ENSMUST00000199896 AhnakE9Q616 5656 aaKnown RBP2,82□□□□□ -1,96
Smarcc1-207ENSMUST00000199896 Gm45337A0A1B0GS71 263 aa2,74□□□□□ -1,97
Smarcc1-207ENSMUST00000199896 A030005L19RikA0A1Y7VIU2 113 aa2,68□□□□□ -1,98
Smarcc1-207ENSMUST00000199896 Krtap28-10A0A1Y7VP58 119 aa2,68□□□□□ -1,98
Smarcc1-207ENSMUST00000199896 Gm40460A0A1B0GR10 244 aa2,67□□□□□ -1,98
Smarcc1-207ENSMUST00000199896 Gm7579A0A1B0GRJ4 243 aa2,67□□□□□ -1,98
Smarcc1-207ENSMUST00000199896 Krtap5-5Q2TA51 241 aa2,67□□□□□ -1,98
Smarcc1-207ENSMUST00000199896 Krtap5-4Q62220 223 aa2,67□□□□□ -1,98
Smarcc1-207ENSMUST00000199896 Krtap21-1Q925H4 128 aa2,66□□□□□ -1,98
Smarcc1-207ENSMUST00000199896 A030005K14RikA0A1Y7VNY1 122 aa2,64□□□□□ -1,99
Smarcc1-207ENSMUST00000199896 Krtap28-13A0A087WQP5 138 aa2,63□□□□□ -1,99
Smarcc1-207ENSMUST00000199896 A030003K21RikA0A1Y7VIM3 128 aa2,57□□□□□ -2
Smarcc1-207ENSMUST00000199896 A0A1Y7VJ07 166 aa2,56□□□□□ -2
Smarcc1-207ENSMUST00000199896 Gm7544A0A1Y7VJ58 118 aa2,49□□□□□ -2,01
Smarcc1-207ENSMUST00000199896 Gm39115A0A1B0GSH7 232 aa2,48□□□□□ -2,01
Smarcc1-207ENSMUST00000199896 Gm6217A0A1Y7VJK9 128 aa2,45□□□□□ -2,02
Smarcc1-207ENSMUST00000199896 A030014E15RikA0A1Y7VJV2 120 aa2,43□□□□□ -2,02
Smarcc1-207ENSMUST00000199896 Gm11567Q9D141 195 aa2,31□□□□□ -2,04
Smarcc1-207ENSMUST00000199896 Gm45618A0A1B0GSA0 219 aa2,12□□□□□ -2,07
Smarcc1-207ENSMUST00000199896 Gm29735A0A1B0GT06 219 aa2,01□□□□□ -2,09
Smarcc1-207ENSMUST00000199896 A0A286YCP9 139 aa1,95□□□□□ -2,1
Smarcc1-207ENSMUST00000199896 Krtap5-1Q64507 230 aa1,6□□□□□ -2,15
Smarcc1-207ENSMUST00000199896 Gm4559A4IF42 199 aa1,1□□□□□ -2,23
Retrieved 80 of 22,080 RNA–protein pairs in 9,9 ms