RNA–Protein interactions for RNA: ENSMUST00000193901.5

Pcdh9-204, Transcript of Protocadherin 9, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pcdh9, Length 6,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-204ENSMUST00000193901 Gm11555B1AQ89 175 aa2.48□□□□□ -2.01
Pcdh9-204ENSMUST00000193901 4932415D10RikA0A1W2P6U8 4986 aa2.48□□□□□ -2.01
Pcdh9-204ENSMUST00000193901 PcloQ9QYX7 5068 aa2.47□□□□□ -2.01
Pcdh9-204ENSMUST00000193901 Pkhd1l1Q80ZA4 4249 aa2.44□□□□□ -2.02
Pcdh9-204ENSMUST00000193901 Sprr2hO70559 108 aa2.44□□□□□ -2.02
Pcdh9-204ENSMUST00000193901 Abca13Q5SSE9 5034 aa2.41□□□□□ -2.02
Pcdh9-204ENSMUST00000193901 Gm10061D3Z714 54 aa2.41□□□□□ -2.02
Pcdh9-204ENSMUST00000193901 Kmt2cQ8BRH4 4903 aa2.37□□□□□ -2.03
Pcdh9-204ENSMUST00000193901 A0A286YCP9 139 aa2.36□□□□□ -2.03
Pcdh9-204ENSMUST00000193901 Fat4Q2PZL6 4981 aa2.33□□□□□ -2.04
Pcdh9-204ENSMUST00000193901 Gm11569B1AQB1 180 aa2.33□□□□□ -2.04
Pcdh9-204ENSMUST00000193901 ZanO88799 5376 aa2.31□□□□□ -2.04
Pcdh9-204ENSMUST00000193901 Ush2AQ2QI47 5193 aa2.3□□□□□ -2.04
Pcdh9-204ENSMUST00000193901 Mdn1A2ANY6 5589 aaKnown RBP2.27□□□□□ -2.05
Pcdh9-204ENSMUST00000193901 Ubr4A2AN08 5180 aa2.26□□□□□ -2.05
Pcdh9-204ENSMUST00000193901 Rnf213E9Q555 5152 aaKnown RBP2.25□□□□□ -2.05
Pcdh9-204ENSMUST00000193901 Lce1kJ3QP15 125 aa2.23□□□□□ -2.05
Pcdh9-204ENSMUST00000193901 Krtap4-2B1AQ85 167 aa2.23□□□□□ -2.05
Pcdh9-204ENSMUST00000193901 Hmcn2A2AJ76 5100 aa2.21□□□□□ -2.06
Pcdh9-204ENSMUST00000193901 Lce1a1Q9CQH5 143 aa2.21□□□□□ -2.06
Pcdh9-204ENSMUST00000193901 Lce1a2Q9D1K4 149 aa2.21□□□□□ -2.06
Pcdh9-204ENSMUST00000193901 Syne1Q6ZWR6 8799 aa2.21□□□□□ -2.06
Pcdh9-204ENSMUST00000193901 Sprr2bO70554 98 aa2.19□□□□□ -2.06
Pcdh9-204ENSMUST00000193901 Muc5bE9Q5I3 4800 aa2.18□□□□□ -2.06
Pcdh9-204ENSMUST00000193901 Gm11938Q9D3H4 131 aa2.16□□□□□ -2.06
Pcdh9-204ENSMUST00000193901 Gm11562A0PK51 136 aa2.16□□□□□ -2.06
Pcdh9-204ENSMUST00000193901 Krtap4-6Q3V4B7 195 aa2.14□□□□□ -2.07
Pcdh9-204ENSMUST00000193901 Mt4P47945 62 aa2.13□□□□□ -2.07
Pcdh9-204ENSMUST00000193901 Gm11596B1AQB0 205 aa2.11□□□□□ -2.07
Pcdh9-204ENSMUST00000193901 SspoQ8CG65 4998 aa2.09□□□□□ -2.08
Pcdh9-204ENSMUST00000193901 Krtap4-16Q91W93 202 aa2.08□□□□□ -2.08
Pcdh9-204ENSMUST00000193901 Gm11564A2A4L9 201 aa2.05□□□□□ -2.08
Pcdh9-204ENSMUST00000193901 Gm11595B1AQA7 289 aa2.05□□□□□ -2.08
Pcdh9-204ENSMUST00000193901 Krtap4-8B1AQA8 209 aa2.05□□□□□ -2.08
Pcdh9-204ENSMUST00000193901 Syne2Q6ZWQ0 6874 aaKnown RBP2.03□□□□□ -2.08
Pcdh9-204ENSMUST00000193901 Krtap4-9B1AQA9 244 aa2.02□□□□□ -2.09
Pcdh9-204ENSMUST00000193901 Mt1P02802 61 aaKnown RBP2□□□□□ -2.09
Pcdh9-204ENSMUST00000193901 ObscnA2AAJ9 8891 aaKnown RBP1.99□□□□□ -2.09
Pcdh9-204ENSMUST00000193901 Krtap17-1A2A5X6 109 aa1.99□□□□□ -2.09
Pcdh9-204ENSMUST00000193901 Fsip2A2ARZ3 6995 aa1.99□□□□□ -2.09
Pcdh9-204ENSMUST00000193901 Muc16A0A140LJ72 8478 aa1.97□□□□□ -2.09
Pcdh9-204ENSMUST00000193901 2300003K06RikA2A4M0 262 aa1.95□□□□□ -2.1
Pcdh9-204ENSMUST00000193901 Krtap4-13Q9D7P3 165 aa1.94□□□□□ -2.1
Pcdh9-204ENSMUST00000193901 Krtap6-3A0A087WQL6 57 aa1.93□□□□□ -2.1
Pcdh9-204ENSMUST00000193901 Eppk1Q8R0W0 6548 aa1.85□□□□□ -2.11
Pcdh9-204ENSMUST00000193901 DstQ91ZU6 7393 aaKnown RBP1.78□□□□□ -2.12
Pcdh9-204ENSMUST00000193901 Macf1Q9QXZ0 7354 aaKnown RBP1.74□□□□□ -2.13
Pcdh9-204ENSMUST00000193901 Krtap20-2E9Q0A8 60 aa1.72□□□□□ -2.13
Pcdh9-204ENSMUST00000193901 Gm11554B1AQB2 190 aa1.71□□□□□ -2.14
Pcdh9-204ENSMUST00000193901 Kmt2dQ6PDK2 5588 aa1.65□□□□□ -2.15
Pcdh9-204ENSMUST00000193901 Gpr98Q8VHN7 6298 aaKnown RBP1.62□□□□□ -2.15
Pcdh9-204ENSMUST00000193901 1110025L11RikO09048 78 aa1.56□□□□□ -2.16
Pcdh9-204ENSMUST00000193901 Krtap6-5Q925H3 78 aa1.56□□□□□ -2.16
Pcdh9-204ENSMUST00000193901 Gm45618A0A1B0GSA0 219 aa1.53□□□□□ -2.16
Pcdh9-204ENSMUST00000193901 Gm10229O08631 77 aa1.53□□□□□ -2.16
Pcdh9-204ENSMUST00000193901 Gm11559Q9D3H7 191 aa1.53□□□□□ -2.17
Pcdh9-204ENSMUST00000193901 Phgr1Q8K0G7 91 aa1.51□□□□□ -2.17
Pcdh9-204ENSMUST00000193901 NebE9Q1W3 7152 aa1.51□□□□□ -2.17
Pcdh9-204ENSMUST00000193901 Gm11639A0A1D5RLM8 5808 aa1.5□□□□□ -2.17
Pcdh9-204ENSMUST00000193901 Krtap5-2Q9D5Z7 189 aa1.49□□□□□ -2.17
Pcdh9-204ENSMUST00000193901 Gm11568A2A4M2 211 aa1.48□□□□□ -2.17
Pcdh9-204ENSMUST00000193901 Krtap9-1Q64526 186 aa1.48□□□□□ -2.17
Pcdh9-204ENSMUST00000193901 Gm39115A0A1B0GSH7 232 aa1.45□□□□□ -2.18
Pcdh9-204ENSMUST00000193901 Gm11567Q9D141 195 aa1.44□□□□□ -2.18
Pcdh9-204ENSMUST00000193901 Gm4553A0A1B0GSA9 284 aa1.42□□□□□ -2.18
Pcdh9-204ENSMUST00000193901 Gm2431E9Q8S1 172 aa1.42□□□□□ -2.18
Pcdh9-204ENSMUST00000193901 Hmcn1D3YXG0 5634 aa1.42□□□□□ -2.18
Pcdh9-204ENSMUST00000193901 Gm45337A0A1B0GS71 263 aa1.39□□□□□ -2.19
Pcdh9-204ENSMUST00000193901 Gm29735A0A1B0GT06 219 aa1.37□□□□□ -2.19
Pcdh9-204ENSMUST00000193901 Muc19Q6PZE0 7524 aa1.32□□□□□ -2.2
Pcdh9-204ENSMUST00000193901 AhnakE9Q616 5656 aaKnown RBP1.31□□□□□ -2.2
Pcdh9-204ENSMUST00000193901 Gm40460A0A1B0GR10 244 aa1.29□□□□□ -2.2
Pcdh9-204ENSMUST00000193901 Gm7579A0A1B0GRJ4 243 aa1.29□□□□□ -2.2
Pcdh9-204ENSMUST00000193901 Gm10153A0A1B0GRL1 320 aa1.29□□□□□ -2.2
Pcdh9-204ENSMUST00000193901 Krtap5-5Q2TA51 241 aa1.29□□□□□ -2.2
Pcdh9-204ENSMUST00000193901 Krtap5-4Q62220 223 aa1.29□□□□□ -2.2
Pcdh9-204ENSMUST00000193901 Krtap6-2O08884 159 aa1.18□□□□□ -2.22
Pcdh9-204ENSMUST00000193901 Krtap5-1Q64507 230 aa1.1□□□□□ -2.23
Pcdh9-204ENSMUST00000193901 Krtap21-1Q925H4 128 aa1.01□□□□□ -2.25
Pcdh9-204ENSMUST00000193901 Gm4559A4IF42 199 aa0.93□□□□□ -2.26
Retrieved 80 of 22,080 RNA–protein pairs in 67 ms