RNA–Protein interactions for RNA: ENSMUST00000192503.1

Pcdha3-201, Transcript of Protocadherin alpha 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha3, Length 5,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3-201ENSMUST00000192503 Krtap17-1A2A5X6 109 aa4.51□□□□□ -1.69
Pcdha3-201ENSMUST00000192503 A0A1Y7VLE6 161 aa4.49□□□□□ -1.69
Pcdha3-201ENSMUST00000192503 Gm11564A2A4L9 201 aa4.47□□□□□ -1.69
Pcdha3-201ENSMUST00000192503 Gm11563B1AQ90 168 aa4.47□□□□□ -1.69
Pcdha3-201ENSMUST00000192503 Gm11595B1AQA7 289 aa4.47□□□□□ -1.69
Pcdha3-201ENSMUST00000192503 Krtap4-8B1AQA8 209 aa4.47□□□□□ -1.69
Pcdha3-201ENSMUST00000192503 Gm11562A0PK51 136 aa4.46□□□□□ -1.7
Pcdha3-201ENSMUST00000192503 Abca13Q5SSE9 5034 aa4.46□□□□□ -1.7
Pcdha3-201ENSMUST00000192503 Fat4Q2PZL6 4981 aa4.45□□□□□ -1.7
Pcdha3-201ENSMUST00000192503 Krtap4-9B1AQA9 244 aa4.42□□□□□ -1.7
Pcdha3-201ENSMUST00000192503 Rnf213E9Q555 5152 aaKnown RBP4.4□□□□□ -1.71
Pcdha3-201ENSMUST00000192503 ZanO88799 5376 aa4.39□□□□□ -1.71
Pcdha3-201ENSMUST00000192503 Ubr4A2AN08 5180 aa4.38□□□□□ -1.71
Pcdha3-201ENSMUST00000192503 Hmcn2A2AJ76 5100 aa4.37□□□□□ -1.71
Pcdha3-201ENSMUST00000192503 Muc5bE9Q5I3 4800 aa4.37□□□□□ -1.71
Pcdha3-201ENSMUST00000192503 Syne2Q6ZWQ0 6874 aaKnown RBP4.36□□□□□ -1.71
Pcdha3-201ENSMUST00000192503 2300003K06RikA2A4M0 262 aa4.32□□□□□ -1.72
Pcdha3-201ENSMUST00000192503 Krtap4-16Q91W93 202 aa4.31□□□□□ -1.72
Pcdha3-201ENSMUST00000192503 Krtap4-7Q9D732 168 aa4.31□□□□□ -1.72
Pcdha3-201ENSMUST00000192503 Krtap4-13Q9D7P3 165 aa4.29□□□□□ -1.72
Pcdha3-201ENSMUST00000192503 Ush2AQ2QI47 5193 aa4.28□□□□□ -1.72
Pcdha3-201ENSMUST00000192503 Fsip2A2ARZ3 6995 aa4.24□□□□□ -1.73
Pcdha3-201ENSMUST00000192503 Krtap6-3A0A087WQL6 57 aa4.15□□□□□ -1.75
Pcdha3-201ENSMUST00000192503 Mt3P28184 68 aa4.12□□□□□ -1.75
Pcdha3-201ENSMUST00000192503 Lce1kJ3QP15 125 aa4.1□□□□□ -1.75
Pcdha3-201ENSMUST00000192503 Lce1a1Q9CQH5 143 aa4.08□□□□□ -1.76
Pcdha3-201ENSMUST00000192503 A030003K21RikA0A1Y7VIM3 128 aa4.05□□□□□ -1.76
Pcdha3-201ENSMUST00000192503 Mt1P02802 61 aaKnown RBP3.97□□□□□ -1.77
Pcdha3-201ENSMUST00000192503 Eppk1Q8R0W0 6548 aa3.93□□□□□ -1.78
Pcdha3-201ENSMUST00000192503 SspoQ8CG65 4998 aa3.93□□□□□ -1.78
Pcdha3-201ENSMUST00000192503 A0A1Y7VJH8 109 aa3.87□□□□□ -1.79
Pcdha3-201ENSMUST00000192503 Gm11554B1AQB2 190 aa3.83□□□□□ -1.8
Pcdha3-201ENSMUST00000192503 Krtap28-10A0A1Y7VP58 119 aa3.82□□□□□ -1.8
Pcdha3-201ENSMUST00000192503 Gm6217A0A1Y7VJK9 128 aa3.76□□□□□ -1.81
Pcdha3-201ENSMUST00000192503 Sprr2bO70554 98 aa3.75□□□□□ -1.81
Pcdha3-201ENSMUST00000192503 ObscnA2AAJ9 8891 aaKnown RBP3.73□□□□□ -1.81
Pcdha3-201ENSMUST00000192503 Gm7544A0A1Y7VJ58 118 aa3.72□□□□□ -1.81
Pcdha3-201ENSMUST00000192503 Muc16A0A140LJ72 8478 aa3.72□□□□□ -1.81
Pcdha3-201ENSMUST00000192503 Macf1Q9QXZ0 7354 aaKnown RBP3.66□□□□□ -1.82
Pcdha3-201ENSMUST00000192503 Krtap20-2E9Q0A8 60 aa3.66□□□□□ -1.82
Pcdha3-201ENSMUST00000192503 Gm11555B1AQ89 175 aa3.66□□□□□ -1.82
Pcdha3-201ENSMUST00000192503 Krtap31-2Q8CAY5 177 aa3.63□□□□□ -1.83
Pcdha3-201ENSMUST00000192503 A030005L19RikA0A1Y7VIU2 113 aa3.62□□□□□ -1.83
Pcdha3-201ENSMUST00000192503 Krtap28-13A0A087WQP5 138 aa3.58□□□□□ -1.84
Pcdha3-201ENSMUST00000192503 A030005K14RikA0A1Y7VNY1 122 aa3.54□□□□□ -1.84
Pcdha3-201ENSMUST00000192503 DstQ91ZU6 7393 aaKnown RBP3.52□□□□□ -1.85
Pcdha3-201ENSMUST00000192503 NebE9Q1W3 7152 aa3.47□□□□□ -1.85
Pcdha3-201ENSMUST00000192503 A0A1Y7VJ07 166 aa3.4□□□□□ -1.87
Pcdha3-201ENSMUST00000192503 Kmt2dQ6PDK2 5588 aa3.34□□□□□ -1.88
Pcdha3-201ENSMUST00000192503 Gpr98Q8VHN7 6298 aaKnown RBP3.26□□□□□ -1.89
Pcdha3-201ENSMUST00000192503 1110025L11RikO09048 78 aa3.22□□□□□ -1.89
Pcdha3-201ENSMUST00000192503 Krtap6-5Q925H3 78 aa3.22□□□□□ -1.89
Pcdha3-201ENSMUST00000192503 Gm11559Q9D3H7 191 aa3.09□□□□□ -1.91
Pcdha3-201ENSMUST00000192503 Gm11639A0A1D5RLM8 5808 aa3.06□□□□□ -1.92
Pcdha3-201ENSMUST00000192503 Gm10229O08631 77 aa3.03□□□□□ -1.92
Pcdha3-201ENSMUST00000192503 A030014E15RikA0A1Y7VJV2 120 aa3.02□□□□□ -1.93
Pcdha3-201ENSMUST00000192503 Phgr1Q8K0G7 91 aa2.97□□□□□ -1.93
Pcdha3-201ENSMUST00000192503 Muc19Q6PZE0 7524 aa2.93□□□□□ -1.94
Pcdha3-201ENSMUST00000192503 Gm11568A2A4M2 211 aa2.84□□□□□ -1.95
Pcdha3-201ENSMUST00000192503 Krtap9-1Q64526 186 aa2.84□□□□□ -1.95
Pcdha3-201ENSMUST00000192503 A0A286YCP9 139 aa2.78□□□□□ -1.96
Pcdha3-201ENSMUST00000192503 Hmcn1D3YXG0 5634 aa2.74□□□□□ -1.97
Pcdha3-201ENSMUST00000192503 Krtap5-2Q9D5Z7 189 aa2.69□□□□□ -1.98
Pcdha3-201ENSMUST00000192503 Gm4553A0A1B0GSA9 284 aa2.61□□□□□ -1.99
Pcdha3-201ENSMUST00000192503 AhnakE9Q616 5656 aaKnown RBP2.45□□□□□ -2.02
Pcdha3-201ENSMUST00000192503 Gm2431E9Q8S1 172 aa2.44□□□□□ -2.02
Pcdha3-201ENSMUST00000192503 Krtap6-2O08884 159 aa2.4□□□□□ -2.03
Pcdha3-201ENSMUST00000192503 Gm11567Q9D141 195 aa2.38□□□□□ -2.03
Pcdha3-201ENSMUST00000192503 Gm10153A0A1B0GRL1 320 aa2.34□□□□□ -2.03
Pcdha3-201ENSMUST00000192503 Krtap21-1Q925H4 128 aa2.29□□□□□ -2.04
Pcdha3-201ENSMUST00000192503 Gm40460A0A1B0GR10 244 aa2.27□□□□□ -2.05
Pcdha3-201ENSMUST00000192503 Gm7579A0A1B0GRJ4 243 aa2.27□□□□□ -2.05
Pcdha3-201ENSMUST00000192503 Krtap5-5Q2TA51 241 aa2.27□□□□□ -2.05
Pcdha3-201ENSMUST00000192503 Krtap5-4Q62220 223 aa2.27□□□□□ -2.05
Pcdha3-201ENSMUST00000192503 Gm45337A0A1B0GS71 263 aa2.27□□□□□ -2.05
Pcdha3-201ENSMUST00000192503 Gm39115A0A1B0GSH7 232 aa2.12□□□□□ -2.07
Pcdha3-201ENSMUST00000192503 Gm45618A0A1B0GSA0 219 aa1.93□□□□□ -2.1
Pcdha3-201ENSMUST00000192503 Gm29735A0A1B0GT06 219 aa1.75□□□□□ -2.13
Pcdha3-201ENSMUST00000192503 Krtap5-1Q64507 230 aa1.45□□□□□ -2.18
Pcdha3-201ENSMUST00000192503 Gm4559A4IF42 199 aa1.22□□□□□ -2.21
Retrieved 80 of 22,080 RNA–protein pairs in 176 ms