RNA–Protein interactions for RNA: ENSMUST00000172269.1

Sptbn4-207, Transcript of Spectrin beta chain, mousemouse

APPRIS ALT2 TSL 2 BASIC

Gene Sptbn4, Length 8,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-207ENSMUST00000172269 Ryr3A2AGL3 4863 aa4,91□□□□□ -1,62
Sptbn4-207ENSMUST00000172269 Mt1P02802 61 aaKnown RBP4,86□□□□□ -1,63
Sptbn4-207ENSMUST00000172269 Krtap4-1Q3UUY3 169 aa4,81□□□□□ -1,64
Sptbn4-207ENSMUST00000172269 Gm11596B1AQB0 205 aa4,8□□□□□ -1,64
Sptbn4-207ENSMUST00000172269 Gm11564A2A4L9 201 aa4,77□□□□□ -1,65
Sptbn4-207ENSMUST00000172269 Gm11563B1AQ90 168 aa4,77□□□□□ -1,65
Sptbn4-207ENSMUST00000172269 Gm11595B1AQA7 289 aa4,77□□□□□ -1,65
Sptbn4-207ENSMUST00000172269 Krtap4-8B1AQA8 209 aa4,77□□□□□ -1,65
Sptbn4-207ENSMUST00000172269 Krtap4-9B1AQA9 244 aa4,76□□□□□ -1,65
Sptbn4-207ENSMUST00000172269 Syne1Q6ZWR6 8799 aa4,72□□□□□ -1,65
Sptbn4-207ENSMUST00000172269 Krtap4-13Q9D7P3 165 aa4,63□□□□□ -1,67
Sptbn4-207ENSMUST00000172269 Syne2Q6ZWQ0 6874 aaKnown RBP4,56□□□□□ -1,68
Sptbn4-207ENSMUST00000172269 Kiaa1109A2AAE1 5005 aa4,56□□□□□ -1,68
Sptbn4-207ENSMUST00000172269 Herc1E9PZP8 4859 aa4,51□□□□□ -1,69
Sptbn4-207ENSMUST00000172269 Birc6O88738 4882 aa4,48□□□□□ -1,69
Sptbn4-207ENSMUST00000172269 Muc5bE9Q5I3 4800 aa4,47□□□□□ -1,69
Sptbn4-207ENSMUST00000172269 Mdn1A2ANY6 5589 aaKnown RBP4,44□□□□□ -1,7
Sptbn4-207ENSMUST00000172269 Krtap6-3A0A087WQL6 57 aa4,44□□□□□ -1,7
Sptbn4-207ENSMUST00000172269 Hmcn2A2AJ76 5100 aa4,4□□□□□ -1,71
Sptbn4-207ENSMUST00000172269 Ubr4A2AN08 5180 aa4,29□□□□□ -1,72
Sptbn4-207ENSMUST00000172269 HydinQ80W93 5154 aa4,29□□□□□ -1,72
Sptbn4-207ENSMUST00000172269 Gm11554B1AQB2 190 aa4,27□□□□□ -1,73
Sptbn4-207ENSMUST00000172269 ObscnA2AAJ9 8891 aaKnown RBP4,26□□□□□ -1,73
Sptbn4-207ENSMUST00000172269 Fsip2A2ARZ3 6995 aa4,21□□□□□ -1,74
Sptbn4-207ENSMUST00000172269 4932415D10RikA0A1W2P6U8 4986 aa4,09□□□□□ -1,75
Sptbn4-207ENSMUST00000172269 Abca13Q5SSE9 5034 aa4□□□□□ -1,77
Sptbn4-207ENSMUST00000172269 Krtap20-2E9Q0A8 60 aa3,99□□□□□ -1,77
Sptbn4-207ENSMUST00000172269 Krtap17-1A2A5X6 109 aa3,99□□□□□ -1,77
Sptbn4-207ENSMUST00000172269 Fat4Q2PZL6 4981 aa3,95□□□□□ -1,78
Sptbn4-207ENSMUST00000172269 SspoQ8CG65 4998 aa3,93□□□□□ -1,78
Sptbn4-207ENSMUST00000172269 1110025L11RikO09048 78 aa3,88□□□□□ -1,79
Sptbn4-207ENSMUST00000172269 Krtap6-5Q925H3 78 aa3,88□□□□□ -1,79
Sptbn4-207ENSMUST00000172269 Rnf213E9Q555 5152 aaKnown RBP3,78□□□□□ -1,8
Sptbn4-207ENSMUST00000172269 Gm10229O08631 77 aa3,77□□□□□ -1,81
Sptbn4-207ENSMUST00000172269 Ush2AQ2QI47 5193 aa3,62□□□□□ -1,83
Sptbn4-207ENSMUST00000172269 Phgr1Q8K0G7 91 aa3,61□□□□□ -1,83
Sptbn4-207ENSMUST00000172269 Eppk1Q8R0W0 6548 aa3,54□□□□□ -1,84
Sptbn4-207ENSMUST00000172269 Muc16A0A140LJ72 8478 aa3,53□□□□□ -1,84
Sptbn4-207ENSMUST00000172269 Kmt2dQ6PDK2 5588 aa3,43□□□□□ -1,86
Sptbn4-207ENSMUST00000172269 Gm11555B1AQ89 175 aa3,42□□□□□ -1,86
Sptbn4-207ENSMUST00000172269 DstQ91ZU6 7393 aaKnown RBP3,33□□□□□ -1,88
Sptbn4-207ENSMUST00000172269 Macf1Q9QXZ0 7354 aaKnown RBP3,22□□□□□ -1,89
Sptbn4-207ENSMUST00000172269 Gm11559Q9D3H7 191 aa3,19□□□□□ -1,9
Sptbn4-207ENSMUST00000172269 Gm11568A2A4M2 211 aa3,1□□□□□ -1,91
Sptbn4-207ENSMUST00000172269 Krtap9-1Q64526 186 aa3,1□□□□□ -1,91
Sptbn4-207ENSMUST00000172269 Gm11567Q9D141 195 aa3,07□□□□□ -1,92
Sptbn4-207ENSMUST00000172269 NebE9Q1W3 7152 aa3,06□□□□□ -1,92
Sptbn4-207ENSMUST00000172269 Muc19Q6PZE0 7524 aa2,98□□□□□ -1,93
Sptbn4-207ENSMUST00000172269 Krtap6-2O08884 159 aa2,92□□□□□ -1,94
Sptbn4-207ENSMUST00000172269 Krtap5-2Q9D5Z7 189 aa2,83□□□□□ -1,96
Sptbn4-207ENSMUST00000172269 Hmcn1D3YXG0 5634 aa2,78□□□□□ -1,96
Sptbn4-207ENSMUST00000172269 Gm11639A0A1D5RLM8 5808 aa2,78□□□□□ -1,96
Sptbn4-207ENSMUST00000172269 Krtap21-1Q925H4 128 aa2,66□□□□□ -1,98
Sptbn4-207ENSMUST00000172269 Gm4553A0A1B0GSA9 284 aa2,63□□□□□ -1,99
Sptbn4-207ENSMUST00000172269 Gpr98Q8VHN7 6298 aaKnown RBP2,55□□□□□ -2
Sptbn4-207ENSMUST00000172269 A030005L19RikA0A1Y7VIU2 113 aa2,39□□□□□ -2,03
Sptbn4-207ENSMUST00000172269 Gm10153A0A1B0GRL1 320 aa2,35□□□□□ -2,03
Sptbn4-207ENSMUST00000172269 Gm2431E9Q8S1 172 aa2,28□□□□□ -2,04
Sptbn4-207ENSMUST00000172269 Gm45337A0A1B0GS71 263 aa2,22□□□□□ -2,05
Sptbn4-207ENSMUST00000172269 Gm40460A0A1B0GR10 244 aa2,17□□□□□ -2,06
Sptbn4-207ENSMUST00000172269 Gm7579A0A1B0GRJ4 243 aa2,17□□□□□ -2,06
Sptbn4-207ENSMUST00000172269 Krtap5-5Q2TA51 241 aa2,17□□□□□ -2,06
Sptbn4-207ENSMUST00000172269 Krtap5-4Q62220 223 aa2,17□□□□□ -2,06
Sptbn4-207ENSMUST00000172269 Gm39115A0A1B0GSH7 232 aa2,15□□□□□ -2,07
Sptbn4-207ENSMUST00000172269 AhnakE9Q616 5656 aaKnown RBP2,14□□□□□ -2,07
Sptbn4-207ENSMUST00000172269 Gm29735A0A1B0GT06 219 aa1,74□□□□□ -2,13
Sptbn4-207ENSMUST00000172269 A0A1Y7VJH8 109 aa1,7□□□□□ -2,14
Sptbn4-207ENSMUST00000172269 Gm45618A0A1B0GSA0 219 aa1,69□□□□□ -2,14
Sptbn4-207ENSMUST00000172269 A0A1Y7VLE6 161 aa1,4□□□□□ -2,19
Sptbn4-207ENSMUST00000172269 Krtap5-1Q64507 230 aa1,33□□□□□ -2,2
Sptbn4-207ENSMUST00000172269 Gm4559A4IF42 199 aa0,8□□□□□ -2,28
Sptbn4-207ENSMUST00000172269 A0A1Y7VJ07 166 aa0,76□□□□□ -2,29
Sptbn4-207ENSMUST00000172269 A0A286YCP9 139 aa0,7□□□□□ -2,3
Sptbn4-207ENSMUST00000172269 A030014E15RikA0A1Y7VJV2 120 aa0,66□□□□□ -2,3
Sptbn4-207ENSMUST00000172269 Krtap28-13A0A087WQP5 138 aa0,53□□□□□ -2,32
Sptbn4-207ENSMUST00000172269 A030003K21RikA0A1Y7VIM3 128 aa0,46□□□□□ -2,34
Sptbn4-207ENSMUST00000172269 Gm6217A0A1Y7VJK9 128 aa0,41□□□□□ -2,34
Sptbn4-207ENSMUST00000172269 Krtap28-10A0A1Y7VP58 119 aa0,31□□□□□ -2,36
Sptbn4-207ENSMUST00000172269 A030005K14RikA0A1Y7VNY1 122 aa0,3□□□□□ -2,36
Sptbn4-207ENSMUST00000172269 Gm7544A0A1Y7VJ58 118 aa0,02□□□□□ -2,41
Retrieved 80 of 22,080 RNA–protein pairs in 9,6 ms