RNA–Protein interactions for RNA: ENSMUST00000172269.1

Sptbn4-207, Transcript of Spectrin beta chain, mousemouse

APPRIS ALT2 TSL 2 BASIC

Gene Sptbn4, Length 8,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-207ENSMUST00000172269 Ryr3A2AGL3 4863 aa4.91□□□□□ -1.62
Sptbn4-207ENSMUST00000172269 Mt1P02802 61 aaKnown RBP4.86□□□□□ -1.63
Sptbn4-207ENSMUST00000172269 Krtap4-1Q3UUY3 169 aa4.81□□□□□ -1.64
Sptbn4-207ENSMUST00000172269 Gm11596B1AQB0 205 aa4.8□□□□□ -1.64
Sptbn4-207ENSMUST00000172269 Gm11564A2A4L9 201 aa4.77□□□□□ -1.65
Sptbn4-207ENSMUST00000172269 Gm11563B1AQ90 168 aa4.77□□□□□ -1.65
Sptbn4-207ENSMUST00000172269 Gm11595B1AQA7 289 aa4.77□□□□□ -1.65
Sptbn4-207ENSMUST00000172269 Krtap4-8B1AQA8 209 aa4.77□□□□□ -1.65
Sptbn4-207ENSMUST00000172269 Krtap4-9B1AQA9 244 aa4.76□□□□□ -1.65
Sptbn4-207ENSMUST00000172269 Syne1Q6ZWR6 8799 aa4.72□□□□□ -1.65
Sptbn4-207ENSMUST00000172269 Krtap4-13Q9D7P3 165 aa4.63□□□□□ -1.67
Sptbn4-207ENSMUST00000172269 Syne2Q6ZWQ0 6874 aaKnown RBP4.56□□□□□ -1.68
Sptbn4-207ENSMUST00000172269 Kiaa1109A2AAE1 5005 aa4.56□□□□□ -1.68
Sptbn4-207ENSMUST00000172269 Herc1E9PZP8 4859 aa4.51□□□□□ -1.69
Sptbn4-207ENSMUST00000172269 Birc6O88738 4882 aa4.48□□□□□ -1.69
Sptbn4-207ENSMUST00000172269 Muc5bE9Q5I3 4800 aa4.47□□□□□ -1.69
Sptbn4-207ENSMUST00000172269 Mdn1A2ANY6 5589 aaKnown RBP4.44□□□□□ -1.7
Sptbn4-207ENSMUST00000172269 Krtap6-3A0A087WQL6 57 aa4.44□□□□□ -1.7
Sptbn4-207ENSMUST00000172269 Hmcn2A2AJ76 5100 aa4.4□□□□□ -1.71
Sptbn4-207ENSMUST00000172269 Ubr4A2AN08 5180 aa4.29□□□□□ -1.72
Sptbn4-207ENSMUST00000172269 HydinQ80W93 5154 aa4.29□□□□□ -1.72
Sptbn4-207ENSMUST00000172269 Gm11554B1AQB2 190 aa4.27□□□□□ -1.73
Sptbn4-207ENSMUST00000172269 ObscnA2AAJ9 8891 aaKnown RBP4.26□□□□□ -1.73
Sptbn4-207ENSMUST00000172269 Fsip2A2ARZ3 6995 aa4.21□□□□□ -1.74
Sptbn4-207ENSMUST00000172269 4932415D10RikA0A1W2P6U8 4986 aa4.09□□□□□ -1.75
Sptbn4-207ENSMUST00000172269 Abca13Q5SSE9 5034 aa4□□□□□ -1.77
Sptbn4-207ENSMUST00000172269 Krtap20-2E9Q0A8 60 aa3.99□□□□□ -1.77
Sptbn4-207ENSMUST00000172269 Krtap17-1A2A5X6 109 aa3.99□□□□□ -1.77
Sptbn4-207ENSMUST00000172269 Fat4Q2PZL6 4981 aa3.95□□□□□ -1.78
Sptbn4-207ENSMUST00000172269 SspoQ8CG65 4998 aa3.93□□□□□ -1.78
Sptbn4-207ENSMUST00000172269 1110025L11RikO09048 78 aa3.88□□□□□ -1.79
Sptbn4-207ENSMUST00000172269 Krtap6-5Q925H3 78 aa3.88□□□□□ -1.79
Sptbn4-207ENSMUST00000172269 Rnf213E9Q555 5152 aaKnown RBP3.78□□□□□ -1.8
Sptbn4-207ENSMUST00000172269 Gm10229O08631 77 aa3.77□□□□□ -1.81
Sptbn4-207ENSMUST00000172269 Ush2AQ2QI47 5193 aa3.62□□□□□ -1.83
Sptbn4-207ENSMUST00000172269 Phgr1Q8K0G7 91 aa3.61□□□□□ -1.83
Sptbn4-207ENSMUST00000172269 Eppk1Q8R0W0 6548 aa3.54□□□□□ -1.84
Sptbn4-207ENSMUST00000172269 Muc16A0A140LJ72 8478 aa3.53□□□□□ -1.84
Sptbn4-207ENSMUST00000172269 Kmt2dQ6PDK2 5588 aa3.43□□□□□ -1.86
Sptbn4-207ENSMUST00000172269 Gm11555B1AQ89 175 aa3.42□□□□□ -1.86
Sptbn4-207ENSMUST00000172269 DstQ91ZU6 7393 aaKnown RBP3.33□□□□□ -1.88
Sptbn4-207ENSMUST00000172269 Macf1Q9QXZ0 7354 aaKnown RBP3.22□□□□□ -1.89
Sptbn4-207ENSMUST00000172269 Gm11559Q9D3H7 191 aa3.19□□□□□ -1.9
Sptbn4-207ENSMUST00000172269 Gm11568A2A4M2 211 aa3.1□□□□□ -1.91
Sptbn4-207ENSMUST00000172269 Krtap9-1Q64526 186 aa3.1□□□□□ -1.91
Sptbn4-207ENSMUST00000172269 Gm11567Q9D141 195 aa3.07□□□□□ -1.92
Sptbn4-207ENSMUST00000172269 NebE9Q1W3 7152 aa3.06□□□□□ -1.92
Sptbn4-207ENSMUST00000172269 Muc19Q6PZE0 7524 aa2.98□□□□□ -1.93
Sptbn4-207ENSMUST00000172269 Krtap6-2O08884 159 aa2.92□□□□□ -1.94
Sptbn4-207ENSMUST00000172269 Krtap5-2Q9D5Z7 189 aa2.83□□□□□ -1.96
Sptbn4-207ENSMUST00000172269 Hmcn1D3YXG0 5634 aa2.78□□□□□ -1.96
Sptbn4-207ENSMUST00000172269 Gm11639A0A1D5RLM8 5808 aa2.78□□□□□ -1.96
Sptbn4-207ENSMUST00000172269 Krtap21-1Q925H4 128 aa2.66□□□□□ -1.98
Sptbn4-207ENSMUST00000172269 Gm4553A0A1B0GSA9 284 aa2.63□□□□□ -1.99
Sptbn4-207ENSMUST00000172269 Gpr98Q8VHN7 6298 aaKnown RBP2.55□□□□□ -2
Sptbn4-207ENSMUST00000172269 A030005L19RikA0A1Y7VIU2 113 aa2.39□□□□□ -2.03
Sptbn4-207ENSMUST00000172269 Gm10153A0A1B0GRL1 320 aa2.35□□□□□ -2.03
Sptbn4-207ENSMUST00000172269 Gm2431E9Q8S1 172 aa2.28□□□□□ -2.04
Sptbn4-207ENSMUST00000172269 Gm45337A0A1B0GS71 263 aa2.22□□□□□ -2.05
Sptbn4-207ENSMUST00000172269 Gm40460A0A1B0GR10 244 aa2.17□□□□□ -2.06
Sptbn4-207ENSMUST00000172269 Gm7579A0A1B0GRJ4 243 aa2.17□□□□□ -2.06
Sptbn4-207ENSMUST00000172269 Krtap5-5Q2TA51 241 aa2.17□□□□□ -2.06
Sptbn4-207ENSMUST00000172269 Krtap5-4Q62220 223 aa2.17□□□□□ -2.06
Sptbn4-207ENSMUST00000172269 Gm39115A0A1B0GSH7 232 aa2.15□□□□□ -2.07
Sptbn4-207ENSMUST00000172269 AhnakE9Q616 5656 aaKnown RBP2.14□□□□□ -2.07
Sptbn4-207ENSMUST00000172269 Gm29735A0A1B0GT06 219 aa1.74□□□□□ -2.13
Sptbn4-207ENSMUST00000172269 A0A1Y7VJH8 109 aa1.7□□□□□ -2.14
Sptbn4-207ENSMUST00000172269 Gm45618A0A1B0GSA0 219 aa1.69□□□□□ -2.14
Sptbn4-207ENSMUST00000172269 A0A1Y7VLE6 161 aa1.4□□□□□ -2.19
Sptbn4-207ENSMUST00000172269 Krtap5-1Q64507 230 aa1.33□□□□□ -2.2
Sptbn4-207ENSMUST00000172269 Gm4559A4IF42 199 aa0.8□□□□□ -2.28
Sptbn4-207ENSMUST00000172269 A0A1Y7VJ07 166 aa0.76□□□□□ -2.29
Sptbn4-207ENSMUST00000172269 A0A286YCP9 139 aa0.7□□□□□ -2.3
Sptbn4-207ENSMUST00000172269 A030014E15RikA0A1Y7VJV2 120 aa0.66□□□□□ -2.3
Sptbn4-207ENSMUST00000172269 Krtap28-13A0A087WQP5 138 aa0.53□□□□□ -2.32
Sptbn4-207ENSMUST00000172269 A030003K21RikA0A1Y7VIM3 128 aa0.46□□□□□ -2.34
Sptbn4-207ENSMUST00000172269 Gm6217A0A1Y7VJK9 128 aa0.41□□□□□ -2.34
Sptbn4-207ENSMUST00000172269 Krtap28-10A0A1Y7VP58 119 aa0.31□□□□□ -2.36
Sptbn4-207ENSMUST00000172269 A030005K14RikA0A1Y7VNY1 122 aa0.3□□□□□ -2.36
Sptbn4-207ENSMUST00000172269 Gm7544A0A1Y7VJ58 118 aa0.02□□□□□ -2.41
Retrieved 80 of 22,080 RNA–protein pairs in 10.7 ms