RNA–Protein interactions for RNA: ENSMUST00000171108.7

Rai1-207, Transcript of Retinoic acid-induced protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rai1, Length 7,125 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1-207ENSMUST00000171108 Sprr2hO70559 108 aa3.6□□□□□ -1.83
Rai1-207ENSMUST00000171108 Krtap17-1A2A5X6 109 aa3.59□□□□□ -1.84
Rai1-207ENSMUST00000171108 Krtap4-9B1AQA9 244 aa3.58□□□□□ -1.84
Rai1-207ENSMUST00000171108 Sprr2dO70555 85 aa3.58□□□□□ -1.84
Rai1-207ENSMUST00000171108 Gm11562A0PK51 136 aa3.57□□□□□ -1.84
Rai1-207ENSMUST00000171108 Krtap31-1Q9D644 177 aa3.53□□□□□ -1.85
Rai1-207ENSMUST00000171108 Krtap4-13Q9D7P3 165 aa3.52□□□□□ -1.85
Rai1-207ENSMUST00000171108 Gm11938Q9D3H4 131 aa3.51□□□□□ -1.85
Rai1-207ENSMUST00000171108 Lce1kJ3QP15 125 aa3.5□□□□□ -1.85
Rai1-207ENSMUST00000171108 Syne1Q6ZWR6 8799 aa3.48□□□□□ -1.85
Rai1-207ENSMUST00000171108 Mt3P28184 68 aa3.42□□□□□ -1.86
Rai1-207ENSMUST00000171108 Hmcn2A2AJ76 5100 aa3.37□□□□□ -1.87
Rai1-207ENSMUST00000171108 Ubr4A2AN08 5180 aa3.35□□□□□ -1.87
Rai1-207ENSMUST00000171108 4932415D10RikA0A1W2P6U8 4986 aa3.35□□□□□ -1.87
Rai1-207ENSMUST00000171108 Lce1a1Q9CQH5 143 aa3.34□□□□□ -1.87
Rai1-207ENSMUST00000171108 Mdn1A2ANY6 5589 aaKnown RBP3.34□□□□□ -1.88
Rai1-207ENSMUST00000171108 Abca13Q5SSE9 5034 aa3.34□□□□□ -1.88
Rai1-207ENSMUST00000171108 ZanO88799 5376 aa3.33□□□□□ -1.88
Rai1-207ENSMUST00000171108 Fat4Q2PZL6 4981 aa3.32□□□□□ -1.88
Rai1-207ENSMUST00000171108 Muc16A0A140LJ72 8478 aa3.31□□□□□ -1.88
Rai1-207ENSMUST00000171108 Sprr2bO70554 98 aa3.3□□□□□ -1.88
Rai1-207ENSMUST00000171108 Krtap4-16Q91W93 202 aa3.3□□□□□ -1.88
Rai1-207ENSMUST00000171108 Fsip2A2ARZ3 6995 aa3.29□□□□□ -1.88
Rai1-207ENSMUST00000171108 Muc5bE9Q5I3 4800 aa3.28□□□□□ -1.88
Rai1-207ENSMUST00000171108 Syne2Q6ZWQ0 6874 aaKnown RBP3.22□□□□□ -1.89
Rai1-207ENSMUST00000171108 Gm11554B1AQB2 190 aa3.2□□□□□ -1.9
Rai1-207ENSMUST00000171108 Krtap6-3A0A087WQL6 57 aa3.2□□□□□ -1.9
Rai1-207ENSMUST00000171108 Rnf213E9Q555 5152 aaKnown RBP3.17□□□□□ -1.9
Rai1-207ENSMUST00000171108 Mt1P02802 61 aaKnown RBP3.09□□□□□ -1.91
Rai1-207ENSMUST00000171108 SspoQ8CG65 4998 aa3□□□□□ -1.93
Rai1-207ENSMUST00000171108 Krtap20-2E9Q0A8 60 aa2.99□□□□□ -1.93
Rai1-207ENSMUST00000171108 Ush2AQ2QI47 5193 aa2.99□□□□□ -1.93
Rai1-207ENSMUST00000171108 ObscnA2AAJ9 8891 aaKnown RBP2.8□□□□□ -1.96
Rai1-207ENSMUST00000171108 Macf1Q9QXZ0 7354 aaKnown RBP2.68□□□□□ -1.98
Rai1-207ENSMUST00000171108 Eppk1Q8R0W0 6548 aa2.56□□□□□ -2
Rai1-207ENSMUST00000171108 NebE9Q1W3 7152 aa2.55□□□□□ -2
Rai1-207ENSMUST00000171108 Gm11555B1AQ89 175 aa2.51□□□□□ -2.01
Rai1-207ENSMUST00000171108 1110025L11RikO09048 78 aa2.5□□□□□ -2.01
Rai1-207ENSMUST00000171108 Krtap6-5Q925H3 78 aa2.5□□□□□ -2.01
Rai1-207ENSMUST00000171108 Muc19Q6PZE0 7524 aa2.5□□□□□ -2.01
Rai1-207ENSMUST00000171108 Kmt2dQ6PDK2 5588 aa2.46□□□□□ -2.01
Rai1-207ENSMUST00000171108 DstQ91ZU6 7393 aaKnown RBP2.44□□□□□ -2.02
Rai1-207ENSMUST00000171108 Gm10229O08631 77 aa2.42□□□□□ -2.02
Rai1-207ENSMUST00000171108 Gm11559Q9D3H7 191 aa2.35□□□□□ -2.03
Rai1-207ENSMUST00000171108 Phgr1Q8K0G7 91 aa2.3□□□□□ -2.04
Rai1-207ENSMUST00000171108 Gm11568A2A4M2 211 aa2.29□□□□□ -2.04
Rai1-207ENSMUST00000171108 Krtap9-1Q64526 186 aa2.29□□□□□ -2.04
Rai1-207ENSMUST00000171108 Gm11639A0A1D5RLM8 5808 aa2.09□□□□□ -2.07
Rai1-207ENSMUST00000171108 Krtap5-2Q9D5Z7 189 aa2.01□□□□□ -2.09
Rai1-207ENSMUST00000171108 Gm11567Q9D141 195 aa1.95□□□□□ -2.1
Rai1-207ENSMUST00000171108 Krtap6-2O08884 159 aa1.91□□□□□ -2.1
Rai1-207ENSMUST00000171108 Gm4553A0A1B0GSA9 284 aa1.88□□□□□ -2.11
Rai1-207ENSMUST00000171108 Gpr98Q8VHN7 6298 aaKnown RBP1.87□□□□□ -2.11
Rai1-207ENSMUST00000171108 Hmcn1D3YXG0 5634 aa1.84□□□□□ -2.12
Rai1-207ENSMUST00000171108 Krtap21-1Q925H4 128 aa1.77□□□□□ -2.13
Rai1-207ENSMUST00000171108 Gm2431E9Q8S1 172 aa1.74□□□□□ -2.13
Rai1-207ENSMUST00000171108 Gm10153A0A1B0GRL1 320 aa1.72□□□□□ -2.13
Rai1-207ENSMUST00000171108 AhnakE9Q616 5656 aaKnown RBP1.7□□□□□ -2.14
Rai1-207ENSMUST00000171108 A030005L19RikA0A1Y7VIU2 113 aa1.64□□□□□ -2.15
Rai1-207ENSMUST00000171108 Gm40460A0A1B0GR10 244 aa1.63□□□□□ -2.15
Rai1-207ENSMUST00000171108 Gm7579A0A1B0GRJ4 243 aa1.63□□□□□ -2.15
Rai1-207ENSMUST00000171108 Krtap5-5Q2TA51 241 aa1.63□□□□□ -2.15
Rai1-207ENSMUST00000171108 Krtap5-4Q62220 223 aa1.63□□□□□ -2.15
Rai1-207ENSMUST00000171108 Gm45337A0A1B0GS71 263 aa1.63□□□□□ -2.15
Rai1-207ENSMUST00000171108 Krtap28-10A0A1Y7VP58 119 aa1.48□□□□□ -2.17
Rai1-207ENSMUST00000171108 Gm39115A0A1B0GSH7 232 aa1.47□□□□□ -2.17
Rai1-207ENSMUST00000171108 A0A1Y7VLE6 161 aa1.47□□□□□ -2.17
Rai1-207ENSMUST00000171108 A0A1Y7VJ07 166 aa1.46□□□□□ -2.18
Rai1-207ENSMUST00000171108 A0A1Y7VJH8 109 aa1.45□□□□□ -2.18
Rai1-207ENSMUST00000171108 A030003K21RikA0A1Y7VIM3 128 aa1.27□□□□□ -2.21
Rai1-207ENSMUST00000171108 Gm7544A0A1Y7VJ58 118 aa1.26□□□□□ -2.21
Rai1-207ENSMUST00000171108 Gm29735A0A1B0GT06 219 aa1.25□□□□□ -2.21
Rai1-207ENSMUST00000171108 Krtap28-13A0A087WQP5 138 aa1.25□□□□□ -2.21
Rai1-207ENSMUST00000171108 Gm6217A0A1Y7VJK9 128 aa1.24□□□□□ -2.21
Rai1-207ENSMUST00000171108 Gm45618A0A1B0GSA0 219 aa1.21□□□□□ -2.22
Rai1-207ENSMUST00000171108 A030005K14RikA0A1Y7VNY1 122 aa1.2□□□□□ -2.22
Rai1-207ENSMUST00000171108 A030014E15RikA0A1Y7VJV2 120 aa1.18□□□□□ -2.22
Rai1-207ENSMUST00000171108 A0A286YCP9 139 aa1.13□□□□□ -2.23
Rai1-207ENSMUST00000171108 Krtap5-1Q64507 230 aa1.05□□□□□ -2.24
Rai1-207ENSMUST00000171108 Gm4559A4IF42 199 aa0.62□□□□□ -2.31
Retrieved 80 of 22,080 RNA–protein pairs in 169.6 ms