RNA–Protein interactions for RNA: ENSMUST00000166431.8

Col6a6-203, Transcript of Collagen alpha-6(VI) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col6a6, Length 7,098 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-203ENSMUST00000166431 Abca13Q5SSE9 5034 aa3.14□□□□□ -1.91
Col6a6-203ENSMUST00000166431 Gm11564A2A4L9 201 aa3.13□□□□□ -1.91
Col6a6-203ENSMUST00000166431 Gm11563B1AQ90 168 aa3.13□□□□□ -1.91
Col6a6-203ENSMUST00000166431 Gm11595B1AQA7 289 aa3.13□□□□□ -1.91
Col6a6-203ENSMUST00000166431 Krtap4-8B1AQA8 209 aa3.13□□□□□ -1.91
Col6a6-203ENSMUST00000166431 Krtap4-16Q91W93 202 aa3.11□□□□□ -1.91
Col6a6-203ENSMUST00000166431 Lce1kJ3QP15 125 aa3.1□□□□□ -1.91
Col6a6-203ENSMUST00000166431 Krtap4-13Q9D7P3 165 aa3.1□□□□□ -1.91
Col6a6-203ENSMUST00000166431 Krtap31-2Q8CAY5 177 aa3.07□□□□□ -1.92
Col6a6-203ENSMUST00000166431 Birc6O88738 4882 aa3.04□□□□□ -1.92
Col6a6-203ENSMUST00000166431 Gm11938Q9D3H4 131 aa3.04□□□□□ -1.92
Col6a6-203ENSMUST00000166431 Herc1E9PZP8 4859 aa3.03□□□□□ -1.92
Col6a6-203ENSMUST00000166431 Mt3P28184 68 aa3.02□□□□□ -1.93
Col6a6-203ENSMUST00000166431 PcloQ9QYX7 5068 aa2.98□□□□□ -1.93
Col6a6-203ENSMUST00000166431 Syne1Q6ZWR6 8799 aa2.92□□□□□ -1.94
Col6a6-203ENSMUST00000166431 Gm11554B1AQB2 190 aa2.9□□□□□ -1.95
Col6a6-203ENSMUST00000166431 Syne2Q6ZWQ0 6874 aaKnown RBP2.87□□□□□ -1.95
Col6a6-203ENSMUST00000166431 4932415D10RikA0A1W2P6U8 4986 aa2.84□□□□□ -1.95
Col6a6-203ENSMUST00000166431 Fsip2A2ARZ3 6995 aa2.83□□□□□ -1.96
Col6a6-203ENSMUST00000166431 Ush2AQ2QI47 5193 aa2.82□□□□□ -1.96
Col6a6-203ENSMUST00000166431 Ubr4A2AN08 5180 aa2.81□□□□□ -1.96
Col6a6-203ENSMUST00000166431 ZanO88799 5376 aa2.77□□□□□ -1.97
Col6a6-203ENSMUST00000166431 Hmcn2A2AJ76 5100 aa2.76□□□□□ -1.97
Col6a6-203ENSMUST00000166431 Mdn1A2ANY6 5589 aaKnown RBP2.74□□□□□ -1.97
Col6a6-203ENSMUST00000166431 Fat4Q2PZL6 4981 aa2.72□□□□□ -1.97
Col6a6-203ENSMUST00000166431 Krtap6-3A0A087WQL6 57 aa2.69□□□□□ -1.98
Col6a6-203ENSMUST00000166431 Krtap20-2E9Q0A8 60 aa2.59□□□□□ -1.99
Col6a6-203ENSMUST00000166431 Mt1P02802 61 aaKnown RBP2.57□□□□□ -2
Col6a6-203ENSMUST00000166431 Muc5bE9Q5I3 4800 aa2.56□□□□□ -2
Col6a6-203ENSMUST00000166431 Rnf213E9Q555 5152 aaKnown RBP2.52□□□□□ -2.01
Col6a6-203ENSMUST00000166431 ObscnA2AAJ9 8891 aaKnown RBP2.38□□□□□ -2.03
Col6a6-203ENSMUST00000166431 SspoQ8CG65 4998 aa2.35□□□□□ -2.03
Col6a6-203ENSMUST00000166431 Muc16A0A140LJ72 8478 aa2.32□□□□□ -2.04
Col6a6-203ENSMUST00000166431 Gm11555B1AQ89 175 aa2.3□□□□□ -2.04
Col6a6-203ENSMUST00000166431 1110025L11RikO09048 78 aa2.16□□□□□ -2.06
Col6a6-203ENSMUST00000166431 Krtap6-5Q925H3 78 aa2.16□□□□□ -2.06
Col6a6-203ENSMUST00000166431 Gm10229O08631 77 aa2.13□□□□□ -2.07
Col6a6-203ENSMUST00000166431 Phgr1Q8K0G7 91 aa2.13□□□□□ -2.07
Col6a6-203ENSMUST00000166431 Macf1Q9QXZ0 7354 aaKnown RBP2.12□□□□□ -2.07
Col6a6-203ENSMUST00000166431 NebE9Q1W3 7152 aa2.1□□□□□ -2.07
Col6a6-203ENSMUST00000166431 DstQ91ZU6 7393 aaKnown RBP2.05□□□□□ -2.08
Col6a6-203ENSMUST00000166431 Muc19Q6PZE0 7524 aa1.99□□□□□ -2.09
Col6a6-203ENSMUST00000166431 Eppk1Q8R0W0 6548 aa1.98□□□□□ -2.09
Col6a6-203ENSMUST00000166431 Gm11568A2A4M2 211 aa1.92□□□□□ -2.1
Col6a6-203ENSMUST00000166431 Krtap9-1Q64526 186 aa1.92□□□□□ -2.1
Col6a6-203ENSMUST00000166431 Gm11559Q9D3H7 191 aa1.92□□□□□ -2.1
Col6a6-203ENSMUST00000166431 Kmt2dQ6PDK2 5588 aa1.81□□□□□ -2.12
Col6a6-203ENSMUST00000166431 Gm11567Q9D141 195 aa1.76□□□□□ -2.13
Col6a6-203ENSMUST00000166431 Krtap6-2O08884 159 aa1.65□□□□□ -2.14
Col6a6-203ENSMUST00000166431 Krtap5-2Q9D5Z7 189 aa1.65□□□□□ -2.15
Col6a6-203ENSMUST00000166431 Gpr98Q8VHN7 6298 aaKnown RBP1.58□□□□□ -2.16
Col6a6-203ENSMUST00000166431 Gm4553A0A1B0GSA9 284 aa1.57□□□□□ -2.16
Col6a6-203ENSMUST00000166431 Hmcn1D3YXG0 5634 aa1.56□□□□□ -2.16
Col6a6-203ENSMUST00000166431 Gm2431E9Q8S1 172 aa1.55□□□□□ -2.16
Col6a6-203ENSMUST00000166431 Gm11639A0A1D5RLM8 5808 aa1.55□□□□□ -2.16
Col6a6-203ENSMUST00000166431 A030005L19RikA0A1Y7VIU2 113 aa1.5□□□□□ -2.17
Col6a6-203ENSMUST00000166431 A0A1Y7VJH8 109 aa1.48□□□□□ -2.17
Col6a6-203ENSMUST00000166431 Gm10153A0A1B0GRL1 320 aa1.44□□□□□ -2.18
Col6a6-203ENSMUST00000166431 Krtap21-1Q925H4 128 aa1.43□□□□□ -2.18
Col6a6-203ENSMUST00000166431 Gm45337A0A1B0GS71 263 aa1.41□□□□□ -2.18
Col6a6-203ENSMUST00000166431 Gm40460A0A1B0GR10 244 aa1.34□□□□□ -2.2
Col6a6-203ENSMUST00000166431 Gm7579A0A1B0GRJ4 243 aa1.34□□□□□ -2.2
Col6a6-203ENSMUST00000166431 Krtap5-5Q2TA51 241 aa1.34□□□□□ -2.2
Col6a6-203ENSMUST00000166431 Krtap5-4Q62220 223 aa1.34□□□□□ -2.2
Col6a6-203ENSMUST00000166431 Gm39115A0A1B0GSH7 232 aa1.32□□□□□ -2.2
Col6a6-203ENSMUST00000166431 AhnakE9Q616 5656 aaKnown RBP1.29□□□□□ -2.2
Col6a6-203ENSMUST00000166431 Gm45618A0A1B0GSA0 219 aa1.16□□□□□ -2.22
Col6a6-203ENSMUST00000166431 A0A1Y7VLE6 161 aa1.13□□□□□ -2.23
Col6a6-203ENSMUST00000166431 A0A286YCP9 139 aa1.06□□□□□ -2.24
Col6a6-203ENSMUST00000166431 Gm29735A0A1B0GT06 219 aa0.97□□□□□ -2.25
Col6a6-203ENSMUST00000166431 Krtap28-13A0A087WQP5 138 aa0.91□□□□□ -2.26
Col6a6-203ENSMUST00000166431 Krtap5-1Q64507 230 aa0.9□□□□□ -2.27
Col6a6-203ENSMUST00000166431 A030014E15RikA0A1Y7VJV2 120 aa0.89□□□□□ -2.27
Col6a6-203ENSMUST00000166431 A0A1Y7VJ07 166 aa0.86□□□□□ -2.27
Col6a6-203ENSMUST00000166431 A030003K21RikA0A1Y7VIM3 128 aa0.73□□□□□ -2.29
Col6a6-203ENSMUST00000166431 Gm6217A0A1Y7VJK9 128 aa0.69□□□□□ -2.3
Col6a6-203ENSMUST00000166431 Krtap28-10A0A1Y7VP58 119 aa0.61□□□□□ -2.31
Col6a6-203ENSMUST00000166431 A030005K14RikA0A1Y7VNY1 122 aa0.58□□□□□ -2.32
Col6a6-203ENSMUST00000166431 Gm7544A0A1Y7VJ58 118 aa0.56□□□□□ -2.32
Col6a6-203ENSMUST00000166431 Gm4559A4IF42 199 aa0.55□□□□□ -2.32
Retrieved 80 of 22,080 RNA–protein pairs in 164.5 ms