RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Gm11596B1AQB0 205 aa2.59□□□□□ -1.99
Col6a5-201ENSMUST00000165165 Krtap4-6Q3V4B7 195 aa2.59□□□□□ -2
Col6a5-201ENSMUST00000165165 Abca13Q5SSE9 5034 aa2.55□□□□□ -2
Col6a5-201ENSMUST00000165165 2300003K06RikA2A4M0 262 aa2.53□□□□□ -2
Col6a5-201ENSMUST00000165165 Krtap4-7Q9D732 168 aa2.52□□□□□ -2.01
Col6a5-201ENSMUST00000165165 ZanO88799 5376 aa2.51□□□□□ -2.01
Col6a5-201ENSMUST00000165165 HydinQ80W93 5154 aa2.5□□□□□ -2.01
Col6a5-201ENSMUST00000165165 PcloQ9QYX7 5068 aa2.49□□□□□ -2.01
Col6a5-201ENSMUST00000165165 Krtap4-1Q3UUY3 169 aa2.47□□□□□ -2.01
Col6a5-201ENSMUST00000165165 Gm11564A2A4L9 201 aa2.46□□□□□ -2.02
Col6a5-201ENSMUST00000165165 Gm11563B1AQ90 168 aa2.46□□□□□ -2.02
Col6a5-201ENSMUST00000165165 Gm11595B1AQA7 289 aa2.46□□□□□ -2.02
Col6a5-201ENSMUST00000165165 Krtap4-8B1AQA8 209 aa2.46□□□□□ -2.02
Col6a5-201ENSMUST00000165165 Krtap6-3A0A087WQL6 57 aa2.42□□□□□ -2.02
Col6a5-201ENSMUST00000165165 4932415D10RikA0A1W2P6U8 4986 aa2.4□□□□□ -2.02
Col6a5-201ENSMUST00000165165 Krtap4-9B1AQA9 244 aa2.4□□□□□ -2.02
Col6a5-201ENSMUST00000165165 Syne1Q6ZWR6 8799 aa2.37□□□□□ -2.03
Col6a5-201ENSMUST00000165165 Fat4Q2PZL6 4981 aa2.37□□□□□ -2.03
Col6a5-201ENSMUST00000165165 Hmcn2A2AJ76 5100 aa2.36□□□□□ -2.03
Col6a5-201ENSMUST00000165165 Krtap4-13Q9D7P3 165 aa2.35□□□□□ -2.03
Col6a5-201ENSMUST00000165165 Ubr4A2AN08 5180 aa2.29□□□□□ -2.04
Col6a5-201ENSMUST00000165165 Muc5bE9Q5I3 4800 aa2.29□□□□□ -2.04
Col6a5-201ENSMUST00000165165 Ush2AQ2QI47 5193 aa2.28□□□□□ -2.04
Col6a5-201ENSMUST00000165165 ObscnA2AAJ9 8891 aaKnown RBP2.27□□□□□ -2.05
Col6a5-201ENSMUST00000165165 Mt1P02802 61 aaKnown RBP2.27□□□□□ -2.05
Col6a5-201ENSMUST00000165165 Rnf213E9Q555 5152 aaKnown RBP2.24□□□□□ -2.05
Col6a5-201ENSMUST00000165165 Syne2Q6ZWQ0 6874 aaKnown RBP2.21□□□□□ -2.06
Col6a5-201ENSMUST00000165165 Gm11554B1AQB2 190 aa2.19□□□□□ -2.06
Col6a5-201ENSMUST00000165165 SspoQ8CG65 4998 aa2.19□□□□□ -2.06
Col6a5-201ENSMUST00000165165 Krtap20-2E9Q0A8 60 aa2.17□□□□□ -2.06
Col6a5-201ENSMUST00000165165 Mdn1A2ANY6 5589 aaKnown RBP2.13□□□□□ -2.07
Col6a5-201ENSMUST00000165165 Eppk1Q8R0W0 6548 aa2.1□□□□□ -2.07
Col6a5-201ENSMUST00000165165 Gm11555B1AQ89 175 aa2.03□□□□□ -2.08
Col6a5-201ENSMUST00000165165 Fsip2A2ARZ3 6995 aa2.01□□□□□ -2.09
Col6a5-201ENSMUST00000165165 Muc16A0A140LJ72 8478 aa1.95□□□□□ -2.1
Col6a5-201ENSMUST00000165165 Phgr1Q8K0G7 91 aa1.89□□□□□ -2.11
Col6a5-201ENSMUST00000165165 1110025L11RikO09048 78 aa1.86□□□□□ -2.11
Col6a5-201ENSMUST00000165165 Krtap6-5Q925H3 78 aa1.86□□□□□ -2.11
Col6a5-201ENSMUST00000165165 Gm10229O08631 77 aa1.84□□□□□ -2.11
Col6a5-201ENSMUST00000165165 Gm11568A2A4M2 211 aa1.77□□□□□ -2.13
Col6a5-201ENSMUST00000165165 Krtap9-1Q64526 186 aa1.77□□□□□ -2.13
Col6a5-201ENSMUST00000165165 Gm11559Q9D3H7 191 aa1.77□□□□□ -2.13
Col6a5-201ENSMUST00000165165 Gm11567Q9D141 195 aa1.7□□□□□ -2.14
Col6a5-201ENSMUST00000165165 Macf1Q9QXZ0 7354 aaKnown RBP1.63□□□□□ -2.15
Col6a5-201ENSMUST00000165165 Krtap5-2Q9D5Z7 189 aa1.61□□□□□ -2.15
Col6a5-201ENSMUST00000165165 Kmt2dQ6PDK2 5588 aa1.6□□□□□ -2.15
Col6a5-201ENSMUST00000165165 DstQ91ZU6 7393 aaKnown RBP1.59□□□□□ -2.15
Col6a5-201ENSMUST00000165165 A030005L19RikA0A1Y7VIU2 113 aa1.57□□□□□ -2.16
Col6a5-201ENSMUST00000165165 NebE9Q1W3 7152 aa1.55□□□□□ -2.16
Col6a5-201ENSMUST00000165165 Muc19Q6PZE0 7524 aa1.54□□□□□ -2.16
Col6a5-201ENSMUST00000165165 Gpr98Q8VHN7 6298 aaKnown RBP1.51□□□□□ -2.17
Col6a5-201ENSMUST00000165165 Gm4553A0A1B0GSA9 284 aa1.5□□□□□ -2.17
Col6a5-201ENSMUST00000165165 Gm10153A0A1B0GRL1 320 aa1.42□□□□□ -2.18
Col6a5-201ENSMUST00000165165 Gm11639A0A1D5RLM8 5808 aa1.41□□□□□ -2.18
Col6a5-201ENSMUST00000165165 Gm2431E9Q8S1 172 aa1.39□□□□□ -2.19
Col6a5-201ENSMUST00000165165 Krtap6-2O08884 159 aa1.39□□□□□ -2.19
Col6a5-201ENSMUST00000165165 Gm45337A0A1B0GS71 263 aa1.38□□□□□ -2.19
Col6a5-201ENSMUST00000165165 Gm40460A0A1B0GR10 244 aa1.36□□□□□ -2.19
Col6a5-201ENSMUST00000165165 Gm7579A0A1B0GRJ4 243 aa1.36□□□□□ -2.19
Col6a5-201ENSMUST00000165165 Krtap5-5Q2TA51 241 aa1.36□□□□□ -2.19
Col6a5-201ENSMUST00000165165 Krtap5-4Q62220 223 aa1.36□□□□□ -2.19
Col6a5-201ENSMUST00000165165 A0A1Y7VJH8 109 aa1.3□□□□□ -2.2
Col6a5-201ENSMUST00000165165 Krtap21-1Q925H4 128 aa1.29□□□□□ -2.2
Col6a5-201ENSMUST00000165165 Hmcn1D3YXG0 5634 aa1.29□□□□□ -2.2
Col6a5-201ENSMUST00000165165 Gm39115A0A1B0GSH7 232 aa1.27□□□□□ -2.21
Col6a5-201ENSMUST00000165165 AhnakE9Q616 5656 aaKnown RBP1.2□□□□□ -2.22
Col6a5-201ENSMUST00000165165 Gm45618A0A1B0GSA0 219 aa1.17□□□□□ -2.22
Col6a5-201ENSMUST00000165165 A0A1Y7VLE6 161 aa1.08□□□□□ -2.24
Col6a5-201ENSMUST00000165165 Gm29735A0A1B0GT06 219 aa1.04□□□□□ -2.24
Col6a5-201ENSMUST00000165165 A0A286YCP9 139 aa0.95□□□□□ -2.26
Col6a5-201ENSMUST00000165165 Krtap28-13A0A087WQP5 138 aa0.86□□□□□ -2.27
Col6a5-201ENSMUST00000165165 Krtap5-1Q64507 230 aa0.86□□□□□ -2.27
Col6a5-201ENSMUST00000165165 A0A1Y7VJ07 166 aa0.75□□□□□ -2.29
Col6a5-201ENSMUST00000165165 A030014E15RikA0A1Y7VJV2 120 aa0.72□□□□□ -2.29
Col6a5-201ENSMUST00000165165 Krtap28-10A0A1Y7VP58 119 aa0.63□□□□□ -2.31
Col6a5-201ENSMUST00000165165 A030003K21RikA0A1Y7VIM3 128 aa0.62□□□□□ -2.31
Col6a5-201ENSMUST00000165165 A030005K14RikA0A1Y7VNY1 122 aa0.6□□□□□ -2.31
Col6a5-201ENSMUST00000165165 Gm7544A0A1Y7VJ58 118 aa0.53□□□□□ -2.32
Col6a5-201ENSMUST00000165165 Gm4559A4IF42 199 aa0.53□□□□□ -2.32
Col6a5-201ENSMUST00000165165 Gm6217A0A1Y7VJK9 128 aa0.51□□□□□ -2.33
Retrieved 80 of 22,080 RNA–protein pairs in 11.6 ms