RNA–Protein interactions for RNA: ENSMUST00000161609.7

Rc3h1-202, Transcript of Roquin-1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rc3h1, Length 11,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-202ENSMUST00000161609 Dnah8Q91XQ0 4731 aa2.32□□□□□ -2.04
Rc3h1-202ENSMUST00000161609 Dnhd1D3Z2X2 4750 aa2.32□□□□□ -2.04
Rc3h1-202ENSMUST00000161609 Krtap6-3A0A087WQL6 57 aa2.31□□□□□ -2.04
Rc3h1-202ENSMUST00000161609 Mt3P28184 68 aa2.29□□□□□ -2.04
Rc3h1-202ENSMUST00000161609 Dnah3Q8BW94 4083 aa2.27□□□□□ -2.05
Rc3h1-202ENSMUST00000161609 Gm11555B1AQ89 175 aa2.27□□□□□ -2.05
Rc3h1-202ENSMUST00000161609 Birc6O88738 4882 aa2.26□□□□□ -2.05
Rc3h1-202ENSMUST00000161609 Herc2Q4U2R1 4836 aa2.24□□□□□ -2.05
Rc3h1-202ENSMUST00000161609 Kmt2cQ8BRH4 4903 aa2.23□□□□□ -2.05
Rc3h1-202ENSMUST00000161609 Dnah7aE9Q0T8 4024 aa2.23□□□□□ -2.05
Rc3h1-202ENSMUST00000161609 Krtap20-2E9Q0A8 60 aa2.23□□□□□ -2.05
Rc3h1-202ENSMUST00000161609 Dnah7cA0A087WR13 4024 aa2.22□□□□□ -2.05
Rc3h1-202ENSMUST00000161609 Pkhd1l1Q80ZA4 4249 aa2.22□□□□□ -2.05
Rc3h1-202ENSMUST00000161609 Pkhd1E9PZ36 4059 aa2.21□□□□□ -2.06
Rc3h1-202ENSMUST00000161609 Gm11938Q9D3H4 131 aa2.21□□□□□ -2.06
Rc3h1-202ENSMUST00000161609 Mdn1A2ANY6 5589 aaKnown RBP2.11□□□□□ -2.07
Rc3h1-202ENSMUST00000161609 Herc1E9PZP8 4859 aa2.08□□□□□ -2.08
Rc3h1-202ENSMUST00000161609 Syne1Q6ZWR6 8799 aa2.07□□□□□ -2.08
Rc3h1-202ENSMUST00000161609 PcloQ9QYX7 5068 aa2.05□□□□□ -2.08
Rc3h1-202ENSMUST00000161609 A0A1Y7VLE6 161 aa2.02□□□□□ -2.09
Rc3h1-202ENSMUST00000161609 4932415D10RikA0A1W2P6U8 4986 aa1.93□□□□□ -2.1
Rc3h1-202ENSMUST00000161609 NebE9Q1W3 7152 aa1.91□□□□□ -2.1
Rc3h1-202ENSMUST00000161609 Ryr2E9Q401 4966 aaKnown RBP1.88□□□□□ -2.11
Rc3h1-202ENSMUST00000161609 Hmcn2A2AJ76 5100 aa1.86□□□□□ -2.11
Rc3h1-202ENSMUST00000161609 A0A1Y7VJH8 109 aa1.84□□□□□ -2.11
Rc3h1-202ENSMUST00000161609 A030003K21RikA0A1Y7VIM3 128 aa1.84□□□□□ -2.12
Rc3h1-202ENSMUST00000161609 Kiaa1109A2AAE1 5005 aa1.83□□□□□ -2.12
Rc3h1-202ENSMUST00000161609 Mt1P02802 61 aaKnown RBP1.82□□□□□ -2.12
Rc3h1-202ENSMUST00000161609 Muc5bE9Q5I3 4800 aa1.82□□□□□ -2.12
Rc3h1-202ENSMUST00000161609 Muc16A0A140LJ72 8478 aa1.8□□□□□ -2.12
Rc3h1-202ENSMUST00000161609 Fat4Q2PZL6 4981 aa1.8□□□□□ -2.12
Rc3h1-202ENSMUST00000161609 Krtap28-10A0A1Y7VP58 119 aa1.78□□□□□ -2.12
Rc3h1-202ENSMUST00000161609 Macf1Q9QXZ0 7354 aaKnown RBP1.78□□□□□ -2.12
Rc3h1-202ENSMUST00000161609 Ubr4A2AN08 5180 aa1.77□□□□□ -2.13
Rc3h1-202ENSMUST00000161609 DstQ91ZU6 7393 aaKnown RBP1.77□□□□□ -2.13
Rc3h1-202ENSMUST00000161609 Abca13Q5SSE9 5034 aa1.74□□□□□ -2.13
Rc3h1-202ENSMUST00000161609 Muc19Q6PZE0 7524 aa1.73□□□□□ -2.13
Rc3h1-202ENSMUST00000161609 Gm6217A0A1Y7VJK9 128 aa1.72□□□□□ -2.13
Rc3h1-202ENSMUST00000161609 ZanO88799 5376 aa1.71□□□□□ -2.14
Rc3h1-202ENSMUST00000161609 Gm7544A0A1Y7VJ58 118 aa1.7□□□□□ -2.14
Rc3h1-202ENSMUST00000161609 Krtap28-13A0A087WQP5 138 aa1.7□□□□□ -2.14
Rc3h1-202ENSMUST00000161609 A030005L19RikA0A1Y7VIU2 113 aa1.68□□□□□ -2.14
Rc3h1-202ENSMUST00000161609 A030005K14RikA0A1Y7VNY1 122 aa1.67□□□□□ -2.14
Rc3h1-202ENSMUST00000161609 Phgr1Q8K0G7 91 aa1.65□□□□□ -2.15
Rc3h1-202ENSMUST00000161609 Gm11568A2A4M2 211 aa1.61□□□□□ -2.15
Rc3h1-202ENSMUST00000161609 Krtap9-1Q64526 186 aa1.61□□□□□ -2.15
Rc3h1-202ENSMUST00000161609 Gm11559Q9D3H7 191 aa1.61□□□□□ -2.15
Rc3h1-202ENSMUST00000161609 A0A1Y7VJ07 166 aa1.61□□□□□ -2.15
Rc3h1-202ENSMUST00000161609 SspoQ8CG65 4998 aa1.57□□□□□ -2.16
Rc3h1-202ENSMUST00000161609 ObscnA2AAJ9 8891 aaKnown RBP1.56□□□□□ -2.16
Rc3h1-202ENSMUST00000161609 Ush2AQ2QI47 5193 aa1.54□□□□□ -2.16
Rc3h1-202ENSMUST00000161609 Rnf213E9Q555 5152 aaKnown RBP1.53□□□□□ -2.16
Rc3h1-202ENSMUST00000161609 Gm10229O08631 77 aa1.52□□□□□ -2.17
Rc3h1-202ENSMUST00000161609 1110025L11RikO09048 78 aa1.46□□□□□ -2.18
Rc3h1-202ENSMUST00000161609 Krtap6-5Q925H3 78 aa1.46□□□□□ -2.18
Rc3h1-202ENSMUST00000161609 A030014E15RikA0A1Y7VJV2 120 aa1.45□□□□□ -2.18
Rc3h1-202ENSMUST00000161609 Gm11567Q9D141 195 aa1.3□□□□□ -2.2
Rc3h1-202ENSMUST00000161609 Kmt2dQ6PDK2 5588 aa1.3□□□□□ -2.2
Rc3h1-202ENSMUST00000161609 Eppk1Q8R0W0 6548 aa1.29□□□□□ -2.2
Rc3h1-202ENSMUST00000161609 Gm2431E9Q8S1 172 aa1.28□□□□□ -2.21
Rc3h1-202ENSMUST00000161609 A0A286YCP9 139 aa1.21□□□□□ -2.22
Rc3h1-202ENSMUST00000161609 Krtap6-2O08884 159 aa1.17□□□□□ -2.22
Rc3h1-202ENSMUST00000161609 Gm11639A0A1D5RLM8 5808 aa1.13□□□□□ -2.23
Rc3h1-202ENSMUST00000161609 Hmcn1D3YXG0 5634 aa1.07□□□□□ -2.24
Rc3h1-202ENSMUST00000161609 Krtap5-2Q9D5Z7 189 aa1.02□□□□□ -2.25
Rc3h1-202ENSMUST00000161609 Krtap21-1Q925H4 128 aa1.01□□□□□ -2.25
Rc3h1-202ENSMUST00000161609 Gm45337A0A1B0GS71 263 aa1.01□□□□□ -2.25
Rc3h1-202ENSMUST00000161609 AhnakE9Q616 5656 aaKnown RBP1.01□□□□□ -2.25
Rc3h1-202ENSMUST00000161609 Gm4553A0A1B0GSA9 284 aa1□□□□□ -2.25
Rc3h1-202ENSMUST00000161609 Gm40460A0A1B0GR10 244 aa0.99□□□□□ -2.25
Rc3h1-202ENSMUST00000161609 Gm7579A0A1B0GRJ4 243 aa0.99□□□□□ -2.25
Rc3h1-202ENSMUST00000161609 Krtap5-5Q2TA51 241 aa0.99□□□□□ -2.25
Rc3h1-202ENSMUST00000161609 Krtap5-4Q62220 223 aa0.99□□□□□ -2.25
Rc3h1-202ENSMUST00000161609 Gm39115A0A1B0GSH7 232 aa0.97□□□□□ -2.25
Rc3h1-202ENSMUST00000161609 Gpr98Q8VHN7 6298 aaKnown RBP0.96□□□□□ -2.26
Rc3h1-202ENSMUST00000161609 Gm45618A0A1B0GSA0 219 aa0.95□□□□□ -2.26
Rc3h1-202ENSMUST00000161609 Gm10153A0A1B0GRL1 320 aa0.9□□□□□ -2.27
Rc3h1-202ENSMUST00000161609 Gm29735A0A1B0GT06 219 aa0.84□□□□□ -2.27
Rc3h1-202ENSMUST00000161609 Krtap5-1Q64507 230 aa0.77□□□□□ -2.29
Rc3h1-202ENSMUST00000161609 Gm4559A4IF42 199 aa0.55□□□□□ -2.32
Retrieved 80 of 22,080 RNA–protein pairs in 80.7 ms