RNA–Protein interactions for RNA: ENSMUST00000113055.8

Shroom3-203, Transcript of Protein Shroom3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shroom3, Length 6,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-203ENSMUST00000113055 Krtap4-9B1AQA9 244 aa4.35□□□□□ -1.71
Shroom3-203ENSMUST00000113055 HydinQ80W93 5154 aa4.35□□□□□ -1.71
Shroom3-203ENSMUST00000113055 Krtap17-1A2A5X6 109 aa4.32□□□□□ -1.72
Shroom3-203ENSMUST00000113055 Krtap4-13Q9D7P3 165 aa4.31□□□□□ -1.72
Shroom3-203ENSMUST00000113055 Krtap31-2Q8CAY5 177 aa4.29□□□□□ -1.72
Shroom3-203ENSMUST00000113055 Lce1kJ3QP15 125 aa4.28□□□□□ -1.72
Shroom3-203ENSMUST00000113055 Gm11938Q9D3H4 131 aa4.27□□□□□ -1.73
Shroom3-203ENSMUST00000113055 Krtap4-16Q91W93 202 aa4.27□□□□□ -1.73
Shroom3-203ENSMUST00000113055 Lce1a1Q9CQH5 143 aa4.26□□□□□ -1.73
Shroom3-203ENSMUST00000113055 Mt3P28184 68 aa4.21□□□□□ -1.74
Shroom3-203ENSMUST00000113055 Kiaa1109A2AAE1 5005 aa4.2□□□□□ -1.74
Shroom3-203ENSMUST00000113055 Syne1Q6ZWR6 8799 aa4.2□□□□□ -1.74
Shroom3-203ENSMUST00000113055 Sprr2bO70554 98 aa4.19□□□□□ -1.74
Shroom3-203ENSMUST00000113055 Mdn1A2ANY6 5589 aaKnown RBP4.13□□□□□ -1.75
Shroom3-203ENSMUST00000113055 Birc6O88738 4882 aa4.04□□□□□ -1.76
Shroom3-203ENSMUST00000113055 Fsip2A2ARZ3 6995 aa4□□□□□ -1.77
Shroom3-203ENSMUST00000113055 Syne2Q6ZWQ0 6874 aaKnown RBP3.98□□□□□ -1.77
Shroom3-203ENSMUST00000113055 Gm11554B1AQB2 190 aa3.96□□□□□ -1.78
Shroom3-203ENSMUST00000113055 Abca13Q5SSE9 5034 aa3.94□□□□□ -1.78
Shroom3-203ENSMUST00000113055 Ubr4A2AN08 5180 aa3.89□□□□□ -1.79
Shroom3-203ENSMUST00000113055 Hmcn2A2AJ76 5100 aa3.87□□□□□ -1.79
Shroom3-203ENSMUST00000113055 Muc5bE9Q5I3 4800 aa3.86□□□□□ -1.79
Shroom3-203ENSMUST00000113055 4932415D10RikA0A1W2P6U8 4986 aa3.83□□□□□ -1.8
Shroom3-203ENSMUST00000113055 ZanO88799 5376 aa3.81□□□□□ -1.8
Shroom3-203ENSMUST00000113055 Krtap6-3A0A087WQL6 57 aa3.78□□□□□ -1.8
Shroom3-203ENSMUST00000113055 Fat4Q2PZL6 4981 aa3.76□□□□□ -1.81
Shroom3-203ENSMUST00000113055 Mt1P02802 61 aaKnown RBP3.67□□□□□ -1.82
Shroom3-203ENSMUST00000113055 Krtap20-2E9Q0A8 60 aa3.62□□□□□ -1.83
Shroom3-203ENSMUST00000113055 Ush2AQ2QI47 5193 aa3.53□□□□□ -1.84
Shroom3-203ENSMUST00000113055 Rnf213E9Q555 5152 aaKnown RBP3.51□□□□□ -1.85
Shroom3-203ENSMUST00000113055 ObscnA2AAJ9 8891 aaKnown RBP3.39□□□□□ -1.87
Shroom3-203ENSMUST00000113055 Muc16A0A140LJ72 8478 aa3.35□□□□□ -1.87
Shroom3-203ENSMUST00000113055 SspoQ8CG65 4998 aa3.35□□□□□ -1.87
Shroom3-203ENSMUST00000113055 1110025L11RikO09048 78 aa3.08□□□□□ -1.92
Shroom3-203ENSMUST00000113055 Krtap6-5Q925H3 78 aa3.08□□□□□ -1.92
Shroom3-203ENSMUST00000113055 Eppk1Q8R0W0 6548 aa3.04□□□□□ -1.92
Shroom3-203ENSMUST00000113055 NebE9Q1W3 7152 aa3.03□□□□□ -1.92
Shroom3-203ENSMUST00000113055 Gm11555B1AQ89 175 aa3.03□□□□□ -1.92
Shroom3-203ENSMUST00000113055 DstQ91ZU6 7393 aaKnown RBP3.03□□□□□ -1.92
Shroom3-203ENSMUST00000113055 Macf1Q9QXZ0 7354 aaKnown RBP3.02□□□□□ -1.93
Shroom3-203ENSMUST00000113055 Gm10229O08631 77 aa2.99□□□□□ -1.93
Shroom3-203ENSMUST00000113055 Kmt2dQ6PDK2 5588 aa2.94□□□□□ -1.94
Shroom3-203ENSMUST00000113055 Phgr1Q8K0G7 91 aa2.92□□□□□ -1.94
Shroom3-203ENSMUST00000113055 Muc19Q6PZE0 7524 aa2.77□□□□□ -1.97
Shroom3-203ENSMUST00000113055 Gm11559Q9D3H7 191 aa2.73□□□□□ -1.97
Shroom3-203ENSMUST00000113055 Gm11568A2A4M2 211 aa2.68□□□□□ -1.98
Shroom3-203ENSMUST00000113055 Krtap9-1Q64526 186 aa2.68□□□□□ -1.98
Shroom3-203ENSMUST00000113055 Gm11567Q9D141 195 aa2.51□□□□□ -2.01
Shroom3-203ENSMUST00000113055 Krtap6-2O08884 159 aa2.34□□□□□ -2.03
Shroom3-203ENSMUST00000113055 Gpr98Q8VHN7 6298 aaKnown RBP2.32□□□□□ -2.04
Shroom3-203ENSMUST00000113055 Gm11639A0A1D5RLM8 5808 aa2.29□□□□□ -2.04
Shroom3-203ENSMUST00000113055 Krtap5-2Q9D5Z7 189 aa2.17□□□□□ -2.06
Shroom3-203ENSMUST00000113055 Krtap21-1Q925H4 128 aa2.08□□□□□ -2.08
Shroom3-203ENSMUST00000113055 Gm4553A0A1B0GSA9 284 aa2.04□□□□□ -2.08
Shroom3-203ENSMUST00000113055 Hmcn1D3YXG0 5634 aa2.04□□□□□ -2.08
Shroom3-203ENSMUST00000113055 Gm2431E9Q8S1 172 aa2.02□□□□□ -2.09
Shroom3-203ENSMUST00000113055 A0A1Y7VLE6 161 aa1.88□□□□□ -2.11
Shroom3-203ENSMUST00000113055 A030005L19RikA0A1Y7VIU2 113 aa1.83□□□□□ -2.12
Shroom3-203ENSMUST00000113055 A0A1Y7VJH8 109 aa1.81□□□□□ -2.12
Shroom3-203ENSMUST00000113055 Gm10153A0A1B0GRL1 320 aa1.81□□□□□ -2.12
Shroom3-203ENSMUST00000113055 AhnakE9Q616 5656 aaKnown RBP1.73□□□□□ -2.13
Shroom3-203ENSMUST00000113055 A030003K21RikA0A1Y7VIM3 128 aa1.7□□□□□ -2.14
Shroom3-203ENSMUST00000113055 A0A286YCP9 139 aa1.69□□□□□ -2.14
Shroom3-203ENSMUST00000113055 Gm45337A0A1B0GS71 263 aa1.68□□□□□ -2.14
Shroom3-203ENSMUST00000113055 A0A1Y7VJ07 166 aa1.67□□□□□ -2.14
Shroom3-203ENSMUST00000113055 Gm40460A0A1B0GR10 244 aa1.64□□□□□ -2.15
Shroom3-203ENSMUST00000113055 Gm7579A0A1B0GRJ4 243 aa1.64□□□□□ -2.15
Shroom3-203ENSMUST00000113055 Krtap5-5Q2TA51 241 aa1.64□□□□□ -2.15
Shroom3-203ENSMUST00000113055 Krtap5-4Q62220 223 aa1.64□□□□□ -2.15
Shroom3-203ENSMUST00000113055 Gm39115A0A1B0GSH7 232 aa1.56□□□□□ -2.16
Shroom3-203ENSMUST00000113055 Gm6217A0A1Y7VJK9 128 aa1.56□□□□□ -2.16
Shroom3-203ENSMUST00000113055 Krtap28-10A0A1Y7VP58 119 aa1.48□□□□□ -2.17
Shroom3-203ENSMUST00000113055 A030005K14RikA0A1Y7VNY1 122 aa1.47□□□□□ -2.17
Shroom3-203ENSMUST00000113055 Gm7544A0A1Y7VJ58 118 aa1.45□□□□□ -2.18
Shroom3-203ENSMUST00000113055 Gm45618A0A1B0GSA0 219 aa1.45□□□□□ -2.18
Shroom3-203ENSMUST00000113055 Krtap28-13A0A087WQP5 138 aa1.43□□□□□ -2.18
Shroom3-203ENSMUST00000113055 A030014E15RikA0A1Y7VJV2 120 aa1.35□□□□□ -2.19
Shroom3-203ENSMUST00000113055 Gm29735A0A1B0GT06 219 aa1.25□□□□□ -2.21
Shroom3-203ENSMUST00000113055 Krtap5-1Q64507 230 aa1.24□□□□□ -2.21
Shroom3-203ENSMUST00000113055 Gm4559A4IF42 199 aa0.69□□□□□ -2.3
Retrieved 80 of 22,080 RNA–protein pairs in 86 ms