RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Krtap4-7Q9D732 168 aa4,73□□□□□ -1,65
Trim71-201ENSMUST00000111816 Krtap4-2B1AQ85 167 aa4,73□□□□□ -1,65
Trim71-201ENSMUST00000111816 2300003K06RikA2A4M0 262 aa4,65□□□□□ -1,67
Trim71-201ENSMUST00000111816 Mdn1A2ANY6 5589 aaKnown RBP4,65□□□□□ -1,67
Trim71-201ENSMUST00000111816 Mt1P02802 61 aaKnown RBP4,63□□□□□ -1,67
Trim71-201ENSMUST00000111816 Herc1E9PZP8 4859 aa4,62□□□□□ -1,67
Trim71-201ENSMUST00000111816 Syne2Q6ZWQ0 6874 aaKnown RBP4,61□□□□□ -1,67
Trim71-201ENSMUST00000111816 ZanO88799 5376 aa4,61□□□□□ -1,67
Trim71-201ENSMUST00000111816 ObscnA2AAJ9 8891 aaKnown RBP4,48□□□□□ -1,69
Trim71-201ENSMUST00000111816 Ubr4A2AN08 5180 aa4,47□□□□□ -1,69
Trim71-201ENSMUST00000111816 Birc6O88738 4882 aa4,45□□□□□ -1,7
Trim71-201ENSMUST00000111816 Krtap4-1Q3UUY3 169 aa4,45□□□□□ -1,7
Trim71-201ENSMUST00000111816 Krtap4-9B1AQA9 244 aa4,41□□□□□ -1,7
Trim71-201ENSMUST00000111816 Gm11564A2A4L9 201 aa4,39□□□□□ -1,71
Trim71-201ENSMUST00000111816 Gm11563B1AQ90 168 aa4,39□□□□□ -1,71
Trim71-201ENSMUST00000111816 Gm11595B1AQA7 289 aa4,39□□□□□ -1,71
Trim71-201ENSMUST00000111816 Krtap4-8B1AQA8 209 aa4,39□□□□□ -1,71
Trim71-201ENSMUST00000111816 Gm11596B1AQB0 205 aa4,39□□□□□ -1,71
Trim71-201ENSMUST00000111816 Krtap4-13Q9D7P3 165 aa4,35□□□□□ -1,71
Trim71-201ENSMUST00000111816 Rnf213E9Q555 5152 aaKnown RBP4,28□□□□□ -1,72
Trim71-201ENSMUST00000111816 4932415D10RikA0A1W2P6U8 4986 aa4,28□□□□□ -1,72
Trim71-201ENSMUST00000111816 Muc5bE9Q5I3 4800 aa4,27□□□□□ -1,73
Trim71-201ENSMUST00000111816 Abca13Q5SSE9 5034 aa4,27□□□□□ -1,73
Trim71-201ENSMUST00000111816 Fat4Q2PZL6 4981 aa4,15□□□□□ -1,75
Trim71-201ENSMUST00000111816 Fsip2A2ARZ3 6995 aa4,13□□□□□ -1,75
Trim71-201ENSMUST00000111816 Gm11554B1AQB2 190 aa4,06□□□□□ -1,76
Trim71-201ENSMUST00000111816 Hmcn2A2AJ76 5100 aa4,04□□□□□ -1,76
Trim71-201ENSMUST00000111816 Krtap6-3A0A087WQL6 57 aa4,02□□□□□ -1,77
Trim71-201ENSMUST00000111816 Ush2AQ2QI47 5193 aa3,99□□□□□ -1,77
Trim71-201ENSMUST00000111816 Krtap17-1A2A5X6 109 aa3,87□□□□□ -1,79
Trim71-201ENSMUST00000111816 SspoQ8CG65 4998 aa3,76□□□□□ -1,81
Trim71-201ENSMUST00000111816 1110025L11RikO09048 78 aa3,73□□□□□ -1,81
Trim71-201ENSMUST00000111816 Krtap6-5Q925H3 78 aa3,73□□□□□ -1,81
Trim71-201ENSMUST00000111816 Muc16A0A140LJ72 8478 aa3,72□□□□□ -1,81
Trim71-201ENSMUST00000111816 Krtap20-2E9Q0A8 60 aa3,7□□□□□ -1,82
Trim71-201ENSMUST00000111816 Gm10229O08631 77 aa3,66□□□□□ -1,82
Trim71-201ENSMUST00000111816 Kmt2dQ6PDK2 5588 aa3,64□□□□□ -1,83
Trim71-201ENSMUST00000111816 Phgr1Q8K0G7 91 aa3,63□□□□□ -1,83
Trim71-201ENSMUST00000111816 Gm11567Q9D141 195 aa3,46□□□□□ -1,85
Trim71-201ENSMUST00000111816 Gm11568A2A4M2 211 aa3,38□□□□□ -1,87
Trim71-201ENSMUST00000111816 Krtap9-1Q64526 186 aa3,38□□□□□ -1,87
Trim71-201ENSMUST00000111816 Gm11559Q9D3H7 191 aa3,38□□□□□ -1,87
Trim71-201ENSMUST00000111816 Macf1Q9QXZ0 7354 aaKnown RBP3,33□□□□□ -1,88
Trim71-201ENSMUST00000111816 Gm11555B1AQ89 175 aa3,27□□□□□ -1,89
Trim71-201ENSMUST00000111816 Eppk1Q8R0W0 6548 aa3,22□□□□□ -1,89
Trim71-201ENSMUST00000111816 DstQ91ZU6 7393 aaKnown RBP3,13□□□□□ -1,91
Trim71-201ENSMUST00000111816 NebE9Q1W3 7152 aa3,11□□□□□ -1,91
Trim71-201ENSMUST00000111816 Muc19Q6PZE0 7524 aa3,06□□□□□ -1,92
Trim71-201ENSMUST00000111816 Gm11639A0A1D5RLM8 5808 aa3,03□□□□□ -1,92
Trim71-201ENSMUST00000111816 Krtap6-2O08884 159 aa2,81□□□□□ -1,96
Trim71-201ENSMUST00000111816 Hmcn1D3YXG0 5634 aa2,68□□□□□ -1,98
Trim71-201ENSMUST00000111816 Gpr98Q8VHN7 6298 aaKnown RBP2,68□□□□□ -1,98
Trim71-201ENSMUST00000111816 Krtap5-2Q9D5Z7 189 aa2,64□□□□□ -1,99
Trim71-201ENSMUST00000111816 Krtap21-1Q925H4 128 aa2,47□□□□□ -2,01
Trim71-201ENSMUST00000111816 AhnakE9Q616 5656 aaKnown RBP2,45□□□□□ -2,02
Trim71-201ENSMUST00000111816 Gm4553A0A1B0GSA9 284 aa2,43□□□□□ -2,02
Trim71-201ENSMUST00000111816 Gm10153A0A1B0GRL1 320 aa2,29□□□□□ -2,04
Trim71-201ENSMUST00000111816 Gm2431E9Q8S1 172 aa2,2□□□□□ -2,06
Trim71-201ENSMUST00000111816 A030005L19RikA0A1Y7VIU2 113 aa2,14□□□□□ -2,07
Trim71-201ENSMUST00000111816 Gm45337A0A1B0GS71 263 aa2,12□□□□□ -2,07
Trim71-201ENSMUST00000111816 Gm40460A0A1B0GR10 244 aa2,11□□□□□ -2,07
Trim71-201ENSMUST00000111816 Gm7579A0A1B0GRJ4 243 aa2,11□□□□□ -2,07
Trim71-201ENSMUST00000111816 Krtap5-5Q2TA51 241 aa2,11□□□□□ -2,07
Trim71-201ENSMUST00000111816 Krtap5-4Q62220 223 aa2,11□□□□□ -2,07
Trim71-201ENSMUST00000111816 A0A1Y7VJH8 109 aa2,09□□□□□ -2,08
Trim71-201ENSMUST00000111816 A0A1Y7VLE6 161 aa2,05□□□□□ -2,08
Trim71-201ENSMUST00000111816 Gm39115A0A1B0GSH7 232 aa1,98□□□□□ -2,09
Trim71-201ENSMUST00000111816 A030003K21RikA0A1Y7VIM3 128 aa1,91□□□□□ -2,1
Trim71-201ENSMUST00000111816 A0A286YCP9 139 aa1,86□□□□□ -2,11
Trim71-201ENSMUST00000111816 Krtap28-10A0A1Y7VP58 119 aa1,85□□□□□ -2,11
Trim71-201ENSMUST00000111816 Gm7544A0A1Y7VJ58 118 aa1,83□□□□□ -2,12
Trim71-201ENSMUST00000111816 Gm6217A0A1Y7VJK9 128 aa1,8□□□□□ -2,12
Trim71-201ENSMUST00000111816 A030005K14RikA0A1Y7VNY1 122 aa1,74□□□□□ -2,13
Trim71-201ENSMUST00000111816 Krtap28-13A0A087WQP5 138 aa1,69□□□□□ -2,14
Trim71-201ENSMUST00000111816 Gm29735A0A1B0GT06 219 aa1,67□□□□□ -2,14
Trim71-201ENSMUST00000111816 Gm45618A0A1B0GSA0 219 aa1,62□□□□□ -2,15
Trim71-201ENSMUST00000111816 A0A1Y7VJ07 166 aa1,56□□□□□ -2,16
Trim71-201ENSMUST00000111816 A030014E15RikA0A1Y7VJV2 120 aa1,31□□□□□ -2,2
Trim71-201ENSMUST00000111816 Krtap5-1Q64507 230 aa1,14□□□□□ -2,23
Trim71-201ENSMUST00000111816 Gm4559A4IF42 199 aa0,93□□□□□ -2,26
Retrieved 80 of 22,080 RNA–protein pairs in 9,3 ms