RNA–Protein interactions for RNA: ENSMUST00000111454.3

Ccr9-201, Transcript of C-C chemokine receptor type 9, mousemouse

TSL 5 BASIC

Gene Ccr9, Length 2,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9-201ENSMUST00000111454 Hmcn2A2AJ76 5100 aa3.31□□□□□ -1.88
Ccr9-201ENSMUST00000111454 Prm1P02319 51 aa3.29□□□□□ -1.88
Ccr9-201ENSMUST00000111454 Gm7735D3YX18 52 aa3.28□□□□□ -1.88
Ccr9-201ENSMUST00000111454 Gm10272F7CZ33 110 aa3.27□□□□□ -1.89
Ccr9-201ENSMUST00000111454 4932415D10RikA0A1W2P6U8 4986 aa3.27□□□□□ -1.89
Ccr9-201ENSMUST00000111454 Gm11564A2A4L9 201 aa3.27□□□□□ -1.89
Ccr9-201ENSMUST00000111454 Gm9789Q8BIG3 52 aa3.26□□□□□ -1.89
Ccr9-201ENSMUST00000111454 Gm17416Q30KP4 66 aa3.22□□□□□ -1.89
Ccr9-201ENSMUST00000111454 Gm17402F6Z0L5 76 aa3.16□□□□□ -1.9
Ccr9-201ENSMUST00000111454 ZanO88799 5376 aa3.14□□□□□ -1.91
Ccr9-201ENSMUST00000111454 Krtap1-3A2A588 173 aa3.12□□□□□ -1.91
Ccr9-201ENSMUST00000111454 Mt3P28184 68 aa3.1□□□□□ -1.91
Ccr9-201ENSMUST00000111454 Fat4Q2PZL6 4981 aa3.09□□□□□ -1.91
Ccr9-201ENSMUST00000111454 Krtap13-1Q8K198 168 aa3.08□□□□□ -1.92
Ccr9-201ENSMUST00000111454 BC029722A0A0N4SW31 51 aa3.07□□□□□ -1.92
Ccr9-201ENSMUST00000111454 Krtap16-3Q8C1I6 86 aa3.03□□□□□ -1.92
Ccr9-201ENSMUST00000111454 Rnf213E9Q555 5152 aaKnown RBP3.03□□□□□ -1.92
Ccr9-201ENSMUST00000111454 Gm40460A0A1B0GR10 244 aa3.02□□□□□ -1.93
Ccr9-201ENSMUST00000111454 Krtap19-1Q925H2 87 aa3.01□□□□□ -1.93
Ccr9-201ENSMUST00000111454 Krtap19-3Q925H6 87 aa3.01□□□□□ -1.93
Ccr9-201ENSMUST00000111454 Kmt2dQ6PDK2 5588 aa3□□□□□ -1.93
Ccr9-201ENSMUST00000111454 Sprr2a3Q4KL71 83 aa3□□□□□ -1.93
Ccr9-201ENSMUST00000111454 Sprr2a1Q9CQK8 83 aa3□□□□□ -1.93
Ccr9-201ENSMUST00000111454 Tnp1P10856 55 aa2.93□□□□□ -1.94
Ccr9-201ENSMUST00000111454 Krtap1-4Q3V2D6 188 aa2.92□□□□□ -1.94
Ccr9-201ENSMUST00000111454 Gm10061D3Z714 54 aa2.91□□□□□ -1.94
Ccr9-201ENSMUST00000111454 SspoQ8CG65 4998 aa2.88□□□□□ -1.95
Ccr9-201ENSMUST00000111454 Spink7Q6IE32 76 aa2.88□□□□□ -1.95
Ccr9-201ENSMUST00000111454 Eppk1Q8R0W0 6548 aa2.79□□□□□ -1.96
Ccr9-201ENSMUST00000111454 2310046K23RikA0A0A6YVW6 87 aa2.77□□□□□ -1.97
Ccr9-201ENSMUST00000111454 Gm11562A0PK51 136 aa2.73□□□□□ -1.97
Ccr9-201ENSMUST00000111454 Mdn1A2ANY6 5589 aaKnown RBP2.71□□□□□ -1.98
Ccr9-201ENSMUST00000111454 Krtap19-2Q925I0 141 aa2.71□□□□□ -1.98
Ccr9-201ENSMUST00000111454 Syne2Q6ZWQ0 6874 aaKnown RBP2.7□□□□□ -1.98
Ccr9-201ENSMUST00000111454 Muc5bE9Q5I3 4800 aa2.67□□□□□ -1.98
Ccr9-201ENSMUST00000111454 Krtap19-9aF8WH65 55 aa2.66□□□□□ -1.98
Ccr9-201ENSMUST00000111454 Gm6358A0A087WPH4 74 aa2.58□□□□□ -2
Ccr9-201ENSMUST00000111454 Krtap6-5Q925H3 78 aa2.58□□□□□ -2
Ccr9-201ENSMUST00000111454 4933428G20RikQ9D3X4 101 aa2.55□□□□□ -2
Ccr9-201ENSMUST00000111454 Krtap8-1O08633 61 aa2.52□□□□□ -2.01
Ccr9-201ENSMUST00000111454 Fsip2A2ARZ3 6995 aa2.49□□□□□ -2.01
Ccr9-201ENSMUST00000111454 Mt2P02798 61 aa2.48□□□□□ -2.01
Ccr9-201ENSMUST00000111454 Krtap19-9bQ99NG9 58 aa2.48□□□□□ -2.01
Ccr9-201ENSMUST00000111454 Sprr2gO70558 76 aa2.44□□□□□ -2.02
Ccr9-201ENSMUST00000111454 Mt4P47945 62 aa2.41□□□□□ -2.02
Ccr9-201ENSMUST00000111454 Gm11938Q9D3H4 131 aa2.38□□□□□ -2.03
Ccr9-201ENSMUST00000111454 Gm11639A0A1D5RLM8 5808 aa2.38□□□□□ -2.03
Ccr9-201ENSMUST00000111454 Sprr2iO70560 76 aa2.37□□□□□ -2.03
Ccr9-201ENSMUST00000111454 Krtap22-2J3QNX6 67 aa2.35□□□□□ -2.03
Ccr9-201ENSMUST00000111454 Sprr2dO70555 85 aa2.35□□□□□ -2.03
Ccr9-201ENSMUST00000111454 Lce3dE9Q8V1 98 aa2.35□□□□□ -2.03
Ccr9-201ENSMUST00000111454 Lce3aQ497I5 98 aa2.35□□□□□ -2.03
Ccr9-201ENSMUST00000111454 Sprr2kO70562 68 aa2.31□□□□□ -2.04
Ccr9-201ENSMUST00000111454 Krtap6-3A0A087WQL6 57 aa2.27□□□□□ -2.05
Ccr9-201ENSMUST00000111454 Sprr2fO70557 76 aa2.23□□□□□ -2.05
Ccr9-201ENSMUST00000111454 Sprr2eO70556 76 aa2.16□□□□□ -2.06
Ccr9-201ENSMUST00000111454 Krtap19-4Q925H7 84 aa2.11□□□□□ -2.07
Ccr9-201ENSMUST00000111454 Lce3fQ6PAI4 98 aa2.1□□□□□ -2.07
Ccr9-201ENSMUST00000111454 Lce3cQ91V05 98 aa2.1□□□□□ -2.07
Ccr9-201ENSMUST00000111454 Syne1Q6ZWR6 8799 aa2.08□□□□□ -2.08
Ccr9-201ENSMUST00000111454 Krtap20-2E9Q0A8 60 aa2.07□□□□□ -2.08
Ccr9-201ENSMUST00000111454 Krtap6-2O08884 159 aa2.07□□□□□ -2.08
Ccr9-201ENSMUST00000111454 Sprr2hO70559 108 aa2.06□□□□□ -2.08
Ccr9-201ENSMUST00000111454 Lce3bQ9CQM7 98 aa2.06□□□□□ -2.08
Ccr9-201ENSMUST00000111454 DstQ91ZU6 7393 aaKnown RBP2.05□□□□□ -2.08
Ccr9-201ENSMUST00000111454 Macf1Q9QXZ0 7354 aaKnown RBP2.03□□□□□ -2.09
Ccr9-201ENSMUST00000111454 Lce3eF8VQJ0 98 aa2.02□□□□□ -2.09
Ccr9-201ENSMUST00000111454 Gm10024A0A0A0MQA4 119 aa2□□□□□ -2.09
Ccr9-201ENSMUST00000111454 Krtap4-16Q91W93 202 aa1.96□□□□□ -2.1
Ccr9-201ENSMUST00000111454 Gm10229O08631 77 aa1.94□□□□□ -2.1
Ccr9-201ENSMUST00000111454 ObscnA2AAJ9 8891 aaKnown RBP1.86□□□□□ -2.11
Ccr9-201ENSMUST00000111454 Muc19Q6PZE0 7524 aa1.86□□□□□ -2.11
Ccr9-201ENSMUST00000111454 Mt1P02802 61 aaKnown RBP1.85□□□□□ -2.11
Ccr9-201ENSMUST00000111454 NebE9Q1W3 7152 aa1.71□□□□□ -2.14
Ccr9-201ENSMUST00000111454 Muc16A0A140LJ72 8478 aa1.66□□□□□ -2.14
Ccr9-201ENSMUST00000111454 AhnakE9Q616 5656 aaKnown RBP1.61□□□□□ -2.15
Ccr9-201ENSMUST00000111454 Sprr2bO70554 98 aa1.39□□□□□ -2.19
Ccr9-201ENSMUST00000111454 1110025L11RikO09048 78 aa1.37□□□□□ -2.19
Ccr9-201ENSMUST00000111454 Krtap21-1Q925H4 128 aa1.26□□□□□ -2.21
Ccr9-201ENSMUST00000111454 Phgr1Q8K0G7 91 aa1.22□□□□□ -2.21
Retrieved 80 of 22,080 RNA–protein pairs in 12.5 ms