RNA–Protein interactions for RNA: ENSMUST00000110461.7

Hif1a-202, Transcript of Hypoxia-inducible factor 1-alpha, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Hif1a, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1a-202ENSMUST00000110461 Defb40Q70KL2 73 aa1.11□□□□□ -2.23
Hif1a-202ENSMUST00000110461 Hivep1Q03172 2688 aa1.11□□□□□ -2.23
Hif1a-202ENSMUST00000110461 Gm10142J3KMP7 120 aa1.1□□□□□ -2.23
Hif1a-202ENSMUST00000110461 Rps29P62274 56 aa1.1□□□□□ -2.23
Hif1a-202ENSMUST00000110461 Krtap6-3A0A087WQL6 57 aa1.1□□□□□ -2.23
Hif1a-202ENSMUST00000110461 NbdyA0A0N4SUI7 68 aa1.1□□□□□ -2.23
Hif1a-202ENSMUST00000110461 Krtap9-5A2A5X3 358 aa1.1□□□□□ -2.23
Hif1a-202ENSMUST00000110461 Lce3cQ91V05 98 aa1.09□□□□□ -2.23
Hif1a-202ENSMUST00000110461 Gm16253D3Z167 63 aa1.09□□□□□ -2.23
Hif1a-202ENSMUST00000110461 Defb39Q70KL3 74 aa1.09□□□□□ -2.23
Hif1a-202ENSMUST00000110461 Lce3aQ497I5 98 aa1.09□□□□□ -2.24
Hif1a-202ENSMUST00000110461 Srrm2Q8BTI8 2703 aaKnown RBP1.09□□□□□ -2.24
Hif1a-202ENSMUST00000110461 Krtap1-5A2A590 122 aa1.07□□□□□ -2.24
Hif1a-202ENSMUST00000110461 Abca13Q5SSE9 5034 aa1.07□□□□□ -2.24
Hif1a-202ENSMUST00000110461 Defb1P56386 69 aa1.07□□□□□ -2.24
Hif1a-202ENSMUST00000110461 Prp2P05143 317 aa1.05□□□□□ -2.24
Hif1a-202ENSMUST00000110461 Gm9789Q8BIG3 52 aa1.05□□□□□ -2.24
Hif1a-202ENSMUST00000110461 Gm10272F7CZ33 110 aa1.05□□□□□ -2.24
Hif1a-202ENSMUST00000110461 Lce3dE9Q8V1 98 aa1.05□□□□□ -2.24
Hif1a-202ENSMUST00000110461 Gm11639A0A1D5RLM8 5808 aa1.04□□□□□ -2.24
Hif1a-202ENSMUST00000110461 Syne2Q6ZWQ0 6874 aaKnown RBP1.04□□□□□ -2.24
Hif1a-202ENSMUST00000110461 Dnhd1D3Z2X2 4750 aa1.04□□□□□ -2.24
Hif1a-202ENSMUST00000110461 Sprr2a3Q4KL71 83 aa1.04□□□□□ -2.24
Hif1a-202ENSMUST00000110461 Sprr2a1Q9CQK8 83 aa1.04□□□□□ -2.24
Hif1a-202ENSMUST00000110461 Muc16A0A140LJ72 8478 aa1.03□□□□□ -2.24
Hif1a-202ENSMUST00000110461 Sprr2iO70560 76 aa1.03□□□□□ -2.24
Hif1a-202ENSMUST00000110461 Krtap19-5O08632 62 aa1.02□□□□□ -2.25
Hif1a-202ENSMUST00000110461 Ush2AQ2QI47 5193 aa1.01□□□□□ -2.25
Hif1a-202ENSMUST00000110461 Stab2Q8R4U0 2559 aa1.01□□□□□ -2.25
Hif1a-202ENSMUST00000110461 Krtap20-2E9Q0A8 60 aa1.01□□□□□ -2.25
Hif1a-202ENSMUST00000110461 Spag11Q8K4N2 71 aa1.01□□□□□ -2.25
Hif1a-202ENSMUST00000110461 Lce3eF8VQJ0 98 aa1□□□□□ -2.25
Hif1a-202ENSMUST00000110461 Lce3fQ6PAI4 98 aa1□□□□□ -2.25
Hif1a-202ENSMUST00000110461 Gm10024A0A0A0MQA4 119 aa0.99□□□□□ -2.25
Hif1a-202ENSMUST00000110461 Prh1P05142 261 aa0.96□□□□□ -2.26
Hif1a-202ENSMUST00000110461 Syne1Q6ZWR6 8799 aa0.95□□□□□ -2.26
Hif1a-202ENSMUST00000110461 Fsip2A2ARZ3 6995 aa0.95□□□□□ -2.26
Hif1a-202ENSMUST00000110461 Hmcn2A2AJ76 5100 aa0.94□□□□□ -2.26
Hif1a-202ENSMUST00000110461 SspoQ8CG65 4998 aa0.94□□□□□ -2.26
Hif1a-202ENSMUST00000110461 Gm11938Q9D3H4 131 aa0.93□□□□□ -2.26
Hif1a-202ENSMUST00000110461 Krtap9-3Q3V2C1 136 aa0.92□□□□□ -2.26
Hif1a-202ENSMUST00000110461 Gm10139O88245 57 aa0.92□□□□□ -2.26
Hif1a-202ENSMUST00000110461 2310046K23RikA0A0A6YVW6 87 aa0.92□□□□□ -2.26
Hif1a-202ENSMUST00000110461 Sprr2fO70557 76 aa0.91□□□□□ -2.26
Hif1a-202ENSMUST00000110461 Sprr2gO70558 76 aa0.91□□□□□ -2.26
Hif1a-202ENSMUST00000110461 Sprr2dO70555 85 aa0.9□□□□□ -2.27
Hif1a-202ENSMUST00000110461 Gm10061D3Z714 54 aa0.89□□□□□ -2.27
Hif1a-202ENSMUST00000110461 NebE9Q1W3 7152 aa0.89□□□□□ -2.27
Hif1a-202ENSMUST00000110461 Macf1Q9QXZ0 7354 aaKnown RBP0.89□□□□□ -2.27
Hif1a-202ENSMUST00000110461 Sprr2kO70562 68 aa0.89□□□□□ -2.27
Hif1a-202ENSMUST00000110461 ZanO88799 5376 aa0.89□□□□□ -2.27
Hif1a-202ENSMUST00000110461 Rnf213E9Q555 5152 aaKnown RBP0.86□□□□□ -2.27
Hif1a-202ENSMUST00000110461 Gm17402F6Z0L5 76 aa0.85□□□□□ -2.27
Hif1a-202ENSMUST00000110461 Kmt2dQ6PDK2 5588 aa0.84□□□□□ -2.28
Hif1a-202ENSMUST00000110461 Krtap19-4Q925H7 84 aa0.84□□□□□ -2.28
Hif1a-202ENSMUST00000110461 Mdn1A2ANY6 5589 aaKnown RBP0.82□□□□□ -2.28
Hif1a-202ENSMUST00000110461 Krtap8-1O08633 61 aa0.82□□□□□ -2.28
Hif1a-202ENSMUST00000110461 Krtap4-16Q91W93 202 aa0.81□□□□□ -2.28
Hif1a-202ENSMUST00000110461 Krtap19-9aF8WH65 55 aa0.78□□□□□ -2.28
Hif1a-202ENSMUST00000110461 Sprr2eO70556 76 aa0.78□□□□□ -2.28
Hif1a-202ENSMUST00000110461 Krtap19-1Q925H2 87 aa0.78□□□□□ -2.28
Hif1a-202ENSMUST00000110461 Krtap16-3Q8C1I6 86 aa0.78□□□□□ -2.28
Hif1a-202ENSMUST00000110461 Muc19Q6PZE0 7524 aa0.76□□□□□ -2.29
Hif1a-202ENSMUST00000110461 AhnakE9Q616 5656 aaKnown RBP0.76□□□□□ -2.29
Hif1a-202ENSMUST00000110461 Mt4P47945 62 aa0.75□□□□□ -2.29
Hif1a-202ENSMUST00000110461 ObscnA2AAJ9 8891 aaKnown RBP0.75□□□□□ -2.29
Hif1a-202ENSMUST00000110461 Krtap19-2Q925I0 141 aa0.74□□□□□ -2.29
Hif1a-202ENSMUST00000110461 Gm6358A0A087WPH4 74 aa0.74□□□□□ -2.29
Hif1a-202ENSMUST00000110461 Krtap22-2J3QNX6 67 aa0.72□□□□□ -2.29
Hif1a-202ENSMUST00000110461 Sprr2hO70559 108 aa0.7□□□□□ -2.3
Hif1a-202ENSMUST00000110461 Mt2P02798 61 aa0.69□□□□□ -2.3
Hif1a-202ENSMUST00000110461 Sprr2bO70554 98 aa0.68□□□□□ -2.3
Hif1a-202ENSMUST00000110461 Krtap19-9bQ99NG9 58 aa0.67□□□□□ -2.3
Hif1a-202ENSMUST00000110461 Krtap6-5Q925H3 78 aa0.64□□□□□ -2.31
Hif1a-202ENSMUST00000110461 Gm10229O08631 77 aa0.63□□□□□ -2.31
Hif1a-202ENSMUST00000110461 Mt1P02802 61 aaKnown RBP0.53□□□□□ -2.32
Hif1a-202ENSMUST00000110461 1110025L11RikO09048 78 aa0.52□□□□□ -2.33
Hif1a-202ENSMUST00000110461 Krtap6-2O08884 159 aa0.52□□□□□ -2.33
Hif1a-202ENSMUST00000110461 Krtap21-1Q925H4 128 aa0.46□□□□□ -2.34
Hif1a-202ENSMUST00000110461 Phgr1Q8K0G7 91 aa0.38□□□□□ -2.35
Retrieved 80 of 22,080 RNA–protein pairs in 6.4 ms