RNA–Protein interactions for RNA: ENSMUST00000108910.9

Scn8a-205, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Scn8a, Length 11,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-205ENSMUST00000108910 Sprr2hO70559 108 aa2□□□□□ -2.09
Scn8a-205ENSMUST00000108910 Krtap4-1Q3UUY3 169 aa1.98□□□□□ -2.09
Scn8a-205ENSMUST00000108910 Muc5bE9Q5I3 4800 aa1.97□□□□□ -2.09
Scn8a-205ENSMUST00000108910 2300003K06RikA2A4M0 262 aa1.97□□□□□ -2.09
Scn8a-205ENSMUST00000108910 Gm11596B1AQB0 205 aa1.96□□□□□ -2.1
Scn8a-205ENSMUST00000108910 Sprr2dO70555 85 aa1.96□□□□□ -2.1
Scn8a-205ENSMUST00000108910 Syne1Q6ZWR6 8799 aa1.95□□□□□ -2.1
Scn8a-205ENSMUST00000108910 Fat4Q2PZL6 4981 aa1.94□□□□□ -2.1
Scn8a-205ENSMUST00000108910 Abca13Q5SSE9 5034 aa1.94□□□□□ -2.1
Scn8a-205ENSMUST00000108910 Gm11564A2A4L9 201 aa1.94□□□□□ -2.1
Scn8a-205ENSMUST00000108910 Gm11563B1AQ90 168 aa1.94□□□□□ -2.1
Scn8a-205ENSMUST00000108910 Gm11595B1AQA7 289 aa1.94□□□□□ -2.1
Scn8a-205ENSMUST00000108910 Krtap4-8B1AQA8 209 aa1.94□□□□□ -2.1
Scn8a-205ENSMUST00000108910 Krtap4-7Q9D732 168 aa1.94□□□□□ -2.1
Scn8a-205ENSMUST00000108910 Gm11938Q9D3H4 131 aa1.93□□□□□ -2.1
Scn8a-205ENSMUST00000108910 Krtap4-9B1AQA9 244 aa1.92□□□□□ -2.1
Scn8a-205ENSMUST00000108910 Krtap4-13Q9D7P3 165 aa1.91□□□□□ -2.1
Scn8a-205ENSMUST00000108910 Rnf213E9Q555 5152 aaKnown RBP1.91□□□□□ -2.1
Scn8a-205ENSMUST00000108910 Lce1kJ3QP15 125 aa1.9□□□□□ -2.1
Scn8a-205ENSMUST00000108910 Krtap4-16Q91W93 202 aa1.88□□□□□ -2.11
Scn8a-205ENSMUST00000108910 Hmcn2A2AJ76 5100 aa1.84□□□□□ -2.11
Scn8a-205ENSMUST00000108910 Ush2AQ2QI47 5193 aa1.83□□□□□ -2.12
Scn8a-205ENSMUST00000108910 Sprr2bO70554 98 aa1.82□□□□□ -2.12
Scn8a-205ENSMUST00000108910 Lce1a1Q9CQH5 143 aa1.81□□□□□ -2.12
Scn8a-205ENSMUST00000108910 Fsip2A2ARZ3 6995 aa1.81□□□□□ -2.12
Scn8a-205ENSMUST00000108910 Syne2Q6ZWQ0 6874 aaKnown RBP1.81□□□□□ -2.12
Scn8a-205ENSMUST00000108910 Gm11554B1AQB2 190 aa1.74□□□□□ -2.13
Scn8a-205ENSMUST00000108910 SspoQ8CG65 4998 aa1.72□□□□□ -2.13
Scn8a-205ENSMUST00000108910 Krtap6-3A0A087WQL6 57 aa1.71□□□□□ -2.14
Scn8a-205ENSMUST00000108910 Mt1P02802 61 aaKnown RBP1.7□□□□□ -2.14
Scn8a-205ENSMUST00000108910 ObscnA2AAJ9 8891 aaKnown RBP1.67□□□□□ -2.14
Scn8a-205ENSMUST00000108910 Krtap20-2E9Q0A8 60 aa1.63□□□□□ -2.15
Scn8a-205ENSMUST00000108910 Eppk1Q8R0W0 6548 aa1.59□□□□□ -2.15
Scn8a-205ENSMUST00000108910 Muc16A0A140LJ72 8478 aa1.58□□□□□ -2.16
Scn8a-205ENSMUST00000108910 A0A1Y7VLE6 161 aa1.55□□□□□ -2.16
Scn8a-205ENSMUST00000108910 Gpr98Q8VHN7 6298 aaKnown RBP1.54□□□□□ -2.16
Scn8a-205ENSMUST00000108910 Kmt2dQ6PDK2 5588 aa1.51□□□□□ -2.17
Scn8a-205ENSMUST00000108910 Gm11555B1AQ89 175 aa1.47□□□□□ -2.17
Scn8a-205ENSMUST00000108910 Macf1Q9QXZ0 7354 aaKnown RBP1.46□□□□□ -2.18
Scn8a-205ENSMUST00000108910 DstQ91ZU6 7393 aaKnown RBP1.44□□□□□ -2.18
Scn8a-205ENSMUST00000108910 NebE9Q1W3 7152 aa1.44□□□□□ -2.18
Scn8a-205ENSMUST00000108910 A030003K21RikA0A1Y7VIM3 128 aa1.43□□□□□ -2.18
Scn8a-205ENSMUST00000108910 1110025L11RikO09048 78 aa1.41□□□□□ -2.18
Scn8a-205ENSMUST00000108910 Krtap6-5Q925H3 78 aa1.41□□□□□ -2.18
Scn8a-205ENSMUST00000108910 Gm10229O08631 77 aa1.35□□□□□ -2.19
Scn8a-205ENSMUST00000108910 Gm6217A0A1Y7VJK9 128 aa1.35□□□□□ -2.19
Scn8a-205ENSMUST00000108910 Gm11568A2A4M2 211 aa1.34□□□□□ -2.19
Scn8a-205ENSMUST00000108910 Gm11639A0A1D5RLM8 5808 aa1.33□□□□□ -2.2
Scn8a-205ENSMUST00000108910 Muc19Q6PZE0 7524 aa1.32□□□□□ -2.2
Scn8a-205ENSMUST00000108910 Krtap28-10A0A1Y7VP58 119 aa1.31□□□□□ -2.2
Scn8a-205ENSMUST00000108910 Krtap9-1Q64526 186 aa1.3□□□□□ -2.2
Scn8a-205ENSMUST00000108910 A0A1Y7VJH8 109 aa1.29□□□□□ -2.2
Scn8a-205ENSMUST00000108910 Phgr1Q8K0G7 91 aa1.28□□□□□ -2.2
Scn8a-205ENSMUST00000108910 Gm11559Q9D3H7 191 aa1.28□□□□□ -2.21
Scn8a-205ENSMUST00000108910 A0A1Y7VJ07 166 aa1.27□□□□□ -2.21
Scn8a-205ENSMUST00000108910 Gm11567Q9D141 195 aa1.27□□□□□ -2.21
Scn8a-205ENSMUST00000108910 Krtap28-13A0A087WQP5 138 aa1.25□□□□□ -2.21
Scn8a-205ENSMUST00000108910 A030005K14RikA0A1Y7VNY1 122 aa1.24□□□□□ -2.21
Scn8a-205ENSMUST00000108910 A030005L19RikA0A1Y7VIU2 113 aa1.22□□□□□ -2.21
Scn8a-205ENSMUST00000108910 A030014E15RikA0A1Y7VJV2 120 aa1.21□□□□□ -2.22
Scn8a-205ENSMUST00000108910 Gm7544A0A1Y7VJ58 118 aa1.2□□□□□ -2.22
Scn8a-205ENSMUST00000108910 Hmcn1D3YXG0 5634 aa1.16□□□□□ -2.22
Scn8a-205ENSMUST00000108910 Krtap5-2Q9D5Z7 189 aa1.11□□□□□ -2.23
Scn8a-205ENSMUST00000108910 Gm4553A0A1B0GSA9 284 aa1.08□□□□□ -2.24
Scn8a-205ENSMUST00000108910 Krtap6-2O08884 159 aa1.08□□□□□ -2.24
Scn8a-205ENSMUST00000108910 AhnakE9Q616 5656 aaKnown RBP1.05□□□□□ -2.24
Scn8a-205ENSMUST00000108910 Gm39115A0A1B0GSH7 232 aa1□□□□□ -2.25
Scn8a-205ENSMUST00000108910 Gm2431E9Q8S1 172 aa0.98□□□□□ -2.25
Scn8a-205ENSMUST00000108910 Krtap21-1Q925H4 128 aa0.98□□□□□ -2.25
Scn8a-205ENSMUST00000108910 A0A286YCP9 139 aa0.98□□□□□ -2.25
Scn8a-205ENSMUST00000108910 Gm45618A0A1B0GSA0 219 aa0.97□□□□□ -2.25
Scn8a-205ENSMUST00000108910 Gm45337A0A1B0GS71 263 aa0.96□□□□□ -2.26
Scn8a-205ENSMUST00000108910 Gm40460A0A1B0GR10 244 aa0.95□□□□□ -2.26
Scn8a-205ENSMUST00000108910 Gm7579A0A1B0GRJ4 243 aa0.95□□□□□ -2.26
Scn8a-205ENSMUST00000108910 Krtap5-5Q2TA51 241 aa0.95□□□□□ -2.26
Scn8a-205ENSMUST00000108910 Krtap5-4Q62220 223 aa0.95□□□□□ -2.26
Scn8a-205ENSMUST00000108910 Gm10153A0A1B0GRL1 320 aa0.93□□□□□ -2.26
Scn8a-205ENSMUST00000108910 Gm29735A0A1B0GT06 219 aa0.71□□□□□ -2.3
Scn8a-205ENSMUST00000108910 Krtap5-1Q64507 230 aa0.61□□□□□ -2.31
Scn8a-205ENSMUST00000108910 Gm4559A4IF42 199 aa0.48□□□□□ -2.33
Retrieved 80 of 22,080 RNA–protein pairs in 83.5 ms