RNA–Protein interactions for RNA: ENSMUST00000108661.7

Chd3-202, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Chd3, Length 7,261 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-202ENSMUST00000108661 Gm11562A0PK51 136 aa3.58□□□□□ -1.84
Chd3-202ENSMUST00000108661 Kiaa1109A2AAE1 5005 aa3.57□□□□□ -1.84
Chd3-202ENSMUST00000108661 Mdn1A2ANY6 5589 aaKnown RBP3.53□□□□□ -1.85
Chd3-202ENSMUST00000108661 Lce1a2Q9D1K4 149 aa3.51□□□□□ -1.85
Chd3-202ENSMUST00000108661 Lce1a1Q9CQH5 143 aa3.51□□□□□ -1.85
Chd3-202ENSMUST00000108661 Lce1kJ3QP15 125 aa3.49□□□□□ -1.85
Chd3-202ENSMUST00000108661 Birc6O88738 4882 aa3.48□□□□□ -1.85
Chd3-202ENSMUST00000108661 Krtap6-3A0A087WQL6 57 aa3.47□□□□□ -1.85
Chd3-202ENSMUST00000108661 Sprr2dO70555 85 aa3.46□□□□□ -1.86
Chd3-202ENSMUST00000108661 Gm11938Q9D3H4 131 aa3.44□□□□□ -1.86
Chd3-202ENSMUST00000108661 Fsip2A2ARZ3 6995 aa3.4□□□□□ -1.86
Chd3-202ENSMUST00000108661 4932415D10RikA0A1W2P6U8 4986 aa3.39□□□□□ -1.87
Chd3-202ENSMUST00000108661 Mt3P28184 68 aa3.39□□□□□ -1.87
Chd3-202ENSMUST00000108661 Krtap31-1Q9D644 177 aa3.36□□□□□ -1.87
Chd3-202ENSMUST00000108661 ZanO88799 5376 aa3.36□□□□□ -1.87
Chd3-202ENSMUST00000108661 Syne2Q6ZWQ0 6874 aaKnown RBP3.36□□□□□ -1.87
Chd3-202ENSMUST00000108661 Muc5bE9Q5I3 4800 aa3.35□□□□□ -1.87
Chd3-202ENSMUST00000108661 Syne1Q6ZWR6 8799 aa3.31□□□□□ -1.88
Chd3-202ENSMUST00000108661 Gm11554B1AQB2 190 aa3.3□□□□□ -1.88
Chd3-202ENSMUST00000108661 Krtap4-16Q91W93 202 aa3.28□□□□□ -1.88
Chd3-202ENSMUST00000108661 Sprr2bO70554 98 aa3.27□□□□□ -1.89
Chd3-202ENSMUST00000108661 Fat4Q2PZL6 4981 aa3.22□□□□□ -1.89
Chd3-202ENSMUST00000108661 Ubr4A2AN08 5180 aa3.16□□□□□ -1.9
Chd3-202ENSMUST00000108661 Abca13Q5SSE9 5034 aa3.15□□□□□ -1.9
Chd3-202ENSMUST00000108661 Hmcn2A2AJ76 5100 aa3.09□□□□□ -1.91
Chd3-202ENSMUST00000108661 Krtap20-2E9Q0A8 60 aa3.08□□□□□ -1.92
Chd3-202ENSMUST00000108661 Ush2AQ2QI47 5193 aa2.98□□□□□ -1.93
Chd3-202ENSMUST00000108661 Krtap31-2Q8CAY5 177 aa2.98□□□□□ -1.93
Chd3-202ENSMUST00000108661 Mt1P02802 61 aaKnown RBP2.97□□□□□ -1.93
Chd3-202ENSMUST00000108661 Rnf213E9Q555 5152 aaKnown RBP2.96□□□□□ -1.93
Chd3-202ENSMUST00000108661 SspoQ8CG65 4998 aa2.93□□□□□ -1.94
Chd3-202ENSMUST00000108661 Muc16A0A140LJ72 8478 aa2.85□□□□□ -1.95
Chd3-202ENSMUST00000108661 Eppk1Q8R0W0 6548 aa2.84□□□□□ -1.96
Chd3-202ENSMUST00000108661 Gm11555B1AQ89 175 aa2.82□□□□□ -1.96
Chd3-202ENSMUST00000108661 Macf1Q9QXZ0 7354 aaKnown RBP2.7□□□□□ -1.98
Chd3-202ENSMUST00000108661 NebE9Q1W3 7152 aa2.69□□□□□ -1.98
Chd3-202ENSMUST00000108661 ObscnA2AAJ9 8891 aaKnown RBP2.64□□□□□ -1.99
Chd3-202ENSMUST00000108661 DstQ91ZU6 7393 aaKnown RBP2.54□□□□□ -2
Chd3-202ENSMUST00000108661 Gm11559Q9D3H7 191 aa2.53□□□□□ -2
Chd3-202ENSMUST00000108661 Muc19Q6PZE0 7524 aa2.49□□□□□ -2.01
Chd3-202ENSMUST00000108661 1110025L11RikO09048 78 aa2.42□□□□□ -2.02
Chd3-202ENSMUST00000108661 Krtap6-5Q925H3 78 aa2.42□□□□□ -2.02
Chd3-202ENSMUST00000108661 Gm10229O08631 77 aa2.34□□□□□ -2.03
Chd3-202ENSMUST00000108661 Gm11568A2A4M2 211 aa2.33□□□□□ -2.04
Chd3-202ENSMUST00000108661 Krtap9-1Q64526 186 aa2.33□□□□□ -2.04
Chd3-202ENSMUST00000108661 Kmt2dQ6PDK2 5588 aa2.33□□□□□ -2.04
Chd3-202ENSMUST00000108661 Phgr1Q8K0G7 91 aa2.19□□□□□ -2.06
Chd3-202ENSMUST00000108661 Krtap5-2Q9D5Z7 189 aa2.07□□□□□ -2.08
Chd3-202ENSMUST00000108661 Gm4553A0A1B0GSA9 284 aa1.99□□□□□ -2.09
Chd3-202ENSMUST00000108661 Gpr98Q8VHN7 6298 aaKnown RBP1.95□□□□□ -2.1
Chd3-202ENSMUST00000108661 A030005L19RikA0A1Y7VIU2 113 aa1.93□□□□□ -2.1
Chd3-202ENSMUST00000108661 Gm11567Q9D141 195 aa1.89□□□□□ -2.11
Chd3-202ENSMUST00000108661 Gm11639A0A1D5RLM8 5808 aa1.89□□□□□ -2.11
Chd3-202ENSMUST00000108661 Krtap6-2O08884 159 aa1.88□□□□□ -2.11
Chd3-202ENSMUST00000108661 Gm2431E9Q8S1 172 aa1.88□□□□□ -2.11
Chd3-202ENSMUST00000108661 Hmcn1D3YXG0 5634 aa1.68□□□□□ -2.14
Chd3-202ENSMUST00000108661 Krtap21-1Q925H4 128 aa1.66□□□□□ -2.14
Chd3-202ENSMUST00000108661 Gm10153A0A1B0GRL1 320 aa1.65□□□□□ -2.14
Chd3-202ENSMUST00000108661 Gm45337A0A1B0GS71 263 aa1.65□□□□□ -2.15
Chd3-202ENSMUST00000108661 Gm40460A0A1B0GR10 244 aa1.61□□□□□ -2.15
Chd3-202ENSMUST00000108661 Gm7579A0A1B0GRJ4 243 aa1.61□□□□□ -2.15
Chd3-202ENSMUST00000108661 Krtap5-5Q2TA51 241 aa1.61□□□□□ -2.15
Chd3-202ENSMUST00000108661 Krtap5-4Q62220 223 aa1.61□□□□□ -2.15
Chd3-202ENSMUST00000108661 A0A1Y7VJH8 109 aa1.6□□□□□ -2.15
Chd3-202ENSMUST00000108661 Gm39115A0A1B0GSH7 232 aa1.58□□□□□ -2.16
Chd3-202ENSMUST00000108661 AhnakE9Q616 5656 aaKnown RBP1.55□□□□□ -2.16
Chd3-202ENSMUST00000108661 Gm45618A0A1B0GSA0 219 aa1.36□□□□□ -2.19
Chd3-202ENSMUST00000108661 A0A1Y7VLE6 161 aa1.2□□□□□ -2.22
Chd3-202ENSMUST00000108661 Gm29735A0A1B0GT06 219 aa1.19□□□□□ -2.22
Chd3-202ENSMUST00000108661 Krtap5-1Q64507 230 aa1.18□□□□□ -2.22
Chd3-202ENSMUST00000108661 A0A286YCP9 139 aa0.95□□□□□ -2.26
Chd3-202ENSMUST00000108661 A0A1Y7VJ07 166 aa0.83□□□□□ -2.28
Chd3-202ENSMUST00000108661 A030014E15RikA0A1Y7VJV2 120 aa0.75□□□□□ -2.29
Chd3-202ENSMUST00000108661 Krtap28-13A0A087WQP5 138 aa0.72□□□□□ -2.29
Chd3-202ENSMUST00000108661 Gm4559A4IF42 199 aa0.69□□□□□ -2.3
Chd3-202ENSMUST00000108661 A030003K21RikA0A1Y7VIM3 128 aa0.62□□□□□ -2.31
Chd3-202ENSMUST00000108661 Krtap28-10A0A1Y7VP58 119 aa0.57□□□□□ -2.32
Chd3-202ENSMUST00000108661 Gm7544A0A1Y7VJ58 118 aa0.51□□□□□ -2.33
Chd3-202ENSMUST00000108661 A030005K14RikA0A1Y7VNY1 122 aa0.51□□□□□ -2.33
Chd3-202ENSMUST00000108661 Gm6217A0A1Y7VJK9 128 aa0.47□□□□□ -2.33
Retrieved 80 of 22,080 RNA–protein pairs in 134.7 ms