RNA–Protein interactions for RNA: ENSMUST00000107935.7

Shank1-202, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-202ENSMUST00000107935 Kmt2cQ8BRH4 4903 aa4.36□□□□□ -1.71
Shank1-202ENSMUST00000107935 Krtap4-16Q91W93 202 aa4.36□□□□□ -1.71
Shank1-202ENSMUST00000107935 Krtap4-13Q9D7P3 165 aa4.33□□□□□ -1.72
Shank1-202ENSMUST00000107935 Kiaa1109A2AAE1 5005 aa4.31□□□□□ -1.72
Shank1-202ENSMUST00000107935 HydinQ80W93 5154 aa4.27□□□□□ -1.73
Shank1-202ENSMUST00000107935 Gm11562A0PK51 136 aa4.26□□□□□ -1.73
Shank1-202ENSMUST00000107935 Birc6O88738 4882 aa4.15□□□□□ -1.75
Shank1-202ENSMUST00000107935 Abca13Q5SSE9 5034 aa4.15□□□□□ -1.75
Shank1-202ENSMUST00000107935 PcloQ9QYX7 5068 aa4.14□□□□□ -1.75
Shank1-202ENSMUST00000107935 Lce1a1Q9CQH5 143 aa4.13□□□□□ -1.75
Shank1-202ENSMUST00000107935 Lce1kJ3QP15 125 aa4.11□□□□□ -1.75
Shank1-202ENSMUST00000107935 Krtap31-2Q8CAY5 177 aa4.07□□□□□ -1.76
Shank1-202ENSMUST00000107935 Fsip2A2ARZ3 6995 aa4.02□□□□□ -1.77
Shank1-202ENSMUST00000107935 Mt3P28184 68 aa4.01□□□□□ -1.77
Shank1-202ENSMUST00000107935 Gm11554B1AQB2 190 aa3.99□□□□□ -1.77
Shank1-202ENSMUST00000107935 Sprr2bO70554 98 aa3.97□□□□□ -1.77
Shank1-202ENSMUST00000107935 4932415D10RikA0A1W2P6U8 4986 aa3.96□□□□□ -1.78
Shank1-202ENSMUST00000107935 Hmcn2A2AJ76 5100 aa3.95□□□□□ -1.78
Shank1-202ENSMUST00000107935 Syne2Q6ZWQ0 6874 aaKnown RBP3.91□□□□□ -1.78
Shank1-202ENSMUST00000107935 Mdn1A2ANY6 5589 aaKnown RBP3.9□□□□□ -1.79
Shank1-202ENSMUST00000107935 Krtap6-3A0A087WQL6 57 aa3.86□□□□□ -1.79
Shank1-202ENSMUST00000107935 ZanO88799 5376 aa3.84□□□□□ -1.8
Shank1-202ENSMUST00000107935 Fat4Q2PZL6 4981 aa3.77□□□□□ -1.81
Shank1-202ENSMUST00000107935 Mt1P02802 61 aaKnown RBP3.75□□□□□ -1.81
Shank1-202ENSMUST00000107935 Ush2AQ2QI47 5193 aa3.75□□□□□ -1.81
Shank1-202ENSMUST00000107935 Muc5bE9Q5I3 4800 aa3.75□□□□□ -1.81
Shank1-202ENSMUST00000107935 Syne1Q6ZWR6 8799 aa3.75□□□□□ -1.81
Shank1-202ENSMUST00000107935 Ubr4A2AN08 5180 aa3.72□□□□□ -1.81
Shank1-202ENSMUST00000107935 Krtap20-2E9Q0A8 60 aa3.57□□□□□ -1.84
Shank1-202ENSMUST00000107935 Rnf213E9Q555 5152 aaKnown RBP3.43□□□□□ -1.86
Shank1-202ENSMUST00000107935 SspoQ8CG65 4998 aa3.3□□□□□ -1.88
Shank1-202ENSMUST00000107935 Eppk1Q8R0W0 6548 aa3.2□□□□□ -1.9
Shank1-202ENSMUST00000107935 Gm11555B1AQ89 175 aa3.18□□□□□ -1.9
Shank1-202ENSMUST00000107935 ObscnA2AAJ9 8891 aaKnown RBP3.13□□□□□ -1.91
Shank1-202ENSMUST00000107935 Muc16A0A140LJ72 8478 aa3.12□□□□□ -1.91
Shank1-202ENSMUST00000107935 1110025L11RikO09048 78 aa3.07□□□□□ -1.92
Shank1-202ENSMUST00000107935 Krtap6-5Q925H3 78 aa3.07□□□□□ -1.92
Shank1-202ENSMUST00000107935 NebE9Q1W3 7152 aa3.06□□□□□ -1.92
Shank1-202ENSMUST00000107935 Phgr1Q8K0G7 91 aa2.99□□□□□ -1.93
Shank1-202ENSMUST00000107935 Macf1Q9QXZ0 7354 aaKnown RBP2.97□□□□□ -1.93
Shank1-202ENSMUST00000107935 Gm10229O08631 77 aa2.94□□□□□ -1.94
Shank1-202ENSMUST00000107935 DstQ91ZU6 7393 aaKnown RBP2.92□□□□□ -1.94
Shank1-202ENSMUST00000107935 Gm11559Q9D3H7 191 aa2.78□□□□□ -1.96
Shank1-202ENSMUST00000107935 Muc19Q6PZE0 7524 aa2.76□□□□□ -1.97
Shank1-202ENSMUST00000107935 Gm11568A2A4M2 211 aa2.66□□□□□ -1.98
Shank1-202ENSMUST00000107935 Krtap9-1Q64526 186 aa2.66□□□□□ -1.98
Shank1-202ENSMUST00000107935 Gm11567Q9D141 195 aa2.62□□□□□ -1.99
Shank1-202ENSMUST00000107935 Kmt2dQ6PDK2 5588 aa2.56□□□□□ -2
Shank1-202ENSMUST00000107935 Gpr98Q8VHN7 6298 aaKnown RBP2.44□□□□□ -2.02
Shank1-202ENSMUST00000107935 Krtap5-2Q9D5Z7 189 aa2.27□□□□□ -2.05
Shank1-202ENSMUST00000107935 Krtap6-2O08884 159 aa2.27□□□□□ -2.05
Shank1-202ENSMUST00000107935 Gm4553A0A1B0GSA9 284 aa2.16□□□□□ -2.06
Shank1-202ENSMUST00000107935 Gm2431E9Q8S1 172 aa2.14□□□□□ -2.07
Shank1-202ENSMUST00000107935 Krtap21-1Q925H4 128 aa2.14□□□□□ -2.07
Shank1-202ENSMUST00000107935 Gm11639A0A1D5RLM8 5808 aa2.1□□□□□ -2.07
Shank1-202ENSMUST00000107935 A030005L19RikA0A1Y7VIU2 113 aa2.06□□□□□ -2.08
Shank1-202ENSMUST00000107935 Hmcn1D3YXG0 5634 aa2.04□□□□□ -2.08
Shank1-202ENSMUST00000107935 Gm10153A0A1B0GRL1 320 aa1.92□□□□□ -2.1
Shank1-202ENSMUST00000107935 Gm45337A0A1B0GS71 263 aa1.86□□□□□ -2.11
Shank1-202ENSMUST00000107935 A0A1Y7VJH8 109 aa1.79□□□□□ -2.12
Shank1-202ENSMUST00000107935 Gm40460A0A1B0GR10 244 aa1.77□□□□□ -2.13
Shank1-202ENSMUST00000107935 Gm7579A0A1B0GRJ4 243 aa1.77□□□□□ -2.13
Shank1-202ENSMUST00000107935 Krtap5-5Q2TA51 241 aa1.77□□□□□ -2.13
Shank1-202ENSMUST00000107935 Krtap5-4Q62220 223 aa1.77□□□□□ -2.13
Shank1-202ENSMUST00000107935 Gm39115A0A1B0GSH7 232 aa1.75□□□□□ -2.13
Shank1-202ENSMUST00000107935 AhnakE9Q616 5656 aaKnown RBP1.73□□□□□ -2.13
Shank1-202ENSMUST00000107935 Gm45618A0A1B0GSA0 219 aa1.5□□□□□ -2.17
Shank1-202ENSMUST00000107935 A0A1Y7VLE6 161 aa1.36□□□□□ -2.19
Shank1-202ENSMUST00000107935 Krtap5-1Q64507 230 aa1.32□□□□□ -2.2
Shank1-202ENSMUST00000107935 Gm29735A0A1B0GT06 219 aa1.29□□□□□ -2.2
Shank1-202ENSMUST00000107935 A0A286YCP9 139 aa0.97□□□□□ -2.25
Shank1-202ENSMUST00000107935 A030014E15RikA0A1Y7VJV2 120 aa0.88□□□□□ -2.27
Shank1-202ENSMUST00000107935 A0A1Y7VJ07 166 aa0.83□□□□□ -2.28
Shank1-202ENSMUST00000107935 Gm4559A4IF42 199 aa0.75□□□□□ -2.29
Shank1-202ENSMUST00000107935 Krtap28-13A0A087WQP5 138 aa0.74□□□□□ -2.29
Shank1-202ENSMUST00000107935 A030003K21RikA0A1Y7VIM3 128 aa0.7□□□□□ -2.3
Shank1-202ENSMUST00000107935 Gm6217A0A1Y7VJK9 128 aa0.54□□□□□ -2.32
Shank1-202ENSMUST00000107935 Krtap28-10A0A1Y7VP58 119 aa0.43□□□□□ -2.34
Shank1-202ENSMUST00000107935 A030005K14RikA0A1Y7VNY1 122 aa0.38□□□□□ -2.35
Shank1-202ENSMUST00000107935 Gm7544A0A1Y7VJ58 118 aa0.04□□□□□ -2.4
Retrieved 80 of 22,080 RNA–protein pairs in 70.9 ms