RNA–Protein interactions for RNA: ENSMUST00000106653.3

Usp47-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Usp47, Length 5,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-201ENSMUST00000106653 Hmcn2A2AJ76 5100 aa5.11□□□□□ -1.59
Usp47-201ENSMUST00000106653 Gm11564A2A4L9 201 aa5.09□□□□□ -1.59
Usp47-201ENSMUST00000106653 Gm11563B1AQ90 168 aa5.09□□□□□ -1.59
Usp47-201ENSMUST00000106653 Gm11595B1AQA7 289 aa5.09□□□□□ -1.59
Usp47-201ENSMUST00000106653 Krtap4-8B1AQA8 209 aa5.09□□□□□ -1.59
Usp47-201ENSMUST00000106653 Muc5bE9Q5I3 4800 aa5.08□□□□□ -1.6
Usp47-201ENSMUST00000106653 Ush2AQ2QI47 5193 aa5.05□□□□□ -1.6
Usp47-201ENSMUST00000106653 2300003K06RikA2A4M0 262 aa5.04□□□□□ -1.6
Usp47-201ENSMUST00000106653 Krtap4-9B1AQA9 244 aa5.03□□□□□ -1.6
Usp47-201ENSMUST00000106653 Rnf213E9Q555 5152 aaKnown RBP5□□□□□ -1.61
Usp47-201ENSMUST00000106653 Sprr2dO70555 85 aa4.99□□□□□ -1.61
Usp47-201ENSMUST00000106653 Gm11562A0PK51 136 aa4.98□□□□□ -1.61
Usp47-201ENSMUST00000106653 Krtap4-7Q9D732 168 aa4.97□□□□□ -1.61
Usp47-201ENSMUST00000106653 Krtap4-13Q9D7P3 165 aa4.9□□□□□ -1.62
Usp47-201ENSMUST00000106653 Gm11938Q9D3H4 131 aa4.89□□□□□ -1.63
Usp47-201ENSMUST00000106653 Sprr2hO70559 108 aa4.89□□□□□ -1.63
Usp47-201ENSMUST00000106653 Lce1kJ3QP15 125 aa4.87□□□□□ -1.63
Usp47-201ENSMUST00000106653 Krtap31-1Q9D644 177 aa4.83□□□□□ -1.64
Usp47-201ENSMUST00000106653 Syne2Q6ZWQ0 6874 aaKnown RBP4.76□□□□□ -1.65
Usp47-201ENSMUST00000106653 Fsip2A2ARZ3 6995 aa4.74□□□□□ -1.65
Usp47-201ENSMUST00000106653 SspoQ8CG65 4998 aa4.73□□□□□ -1.65
Usp47-201ENSMUST00000106653 Mt3P28184 68 aa4.69□□□□□ -1.66
Usp47-201ENSMUST00000106653 Syne1Q6ZWR6 8799 aa4.68□□□□□ -1.66
Usp47-201ENSMUST00000106653 Krtap6-3A0A087WQL6 57 aa4.53□□□□□ -1.68
Usp47-201ENSMUST00000106653 Lce1a1Q9CQH5 143 aa4.53□□□□□ -1.68
Usp47-201ENSMUST00000106653 Krtap4-16Q91W93 202 aa4.42□□□□□ -1.7
Usp47-201ENSMUST00000106653 Mt1P02802 61 aaKnown RBP4.39□□□□□ -1.71
Usp47-201ENSMUST00000106653 Gm11554B1AQB2 190 aa4.35□□□□□ -1.71
Usp47-201ENSMUST00000106653 Krtap20-2E9Q0A8 60 aa4.29□□□□□ -1.72
Usp47-201ENSMUST00000106653 Gm11555B1AQ89 175 aa4.06□□□□□ -1.76
Usp47-201ENSMUST00000106653 ObscnA2AAJ9 8891 aaKnown RBP4.02□□□□□ -1.77
Usp47-201ENSMUST00000106653 Sprr2bO70554 98 aa3.98□□□□□ -1.77
Usp47-201ENSMUST00000106653 Muc16A0A140LJ72 8478 aa3.88□□□□□ -1.79
Usp47-201ENSMUST00000106653 Eppk1Q8R0W0 6548 aa3.84□□□□□ -1.8
Usp47-201ENSMUST00000106653 DstQ91ZU6 7393 aaKnown RBP3.72□□□□□ -1.81
Usp47-201ENSMUST00000106653 Kmt2dQ6PDK2 5588 aa3.7□□□□□ -1.82
Usp47-201ENSMUST00000106653 Macf1Q9QXZ0 7354 aaKnown RBP3.69□□□□□ -1.82
Usp47-201ENSMUST00000106653 Krtap31-2Q8CAY5 177 aa3.62□□□□□ -1.83
Usp47-201ENSMUST00000106653 1110025L11RikO09048 78 aa3.59□□□□□ -1.83
Usp47-201ENSMUST00000106653 Krtap6-5Q925H3 78 aa3.59□□□□□ -1.83
Usp47-201ENSMUST00000106653 NebE9Q1W3 7152 aa3.57□□□□□ -1.84
Usp47-201ENSMUST00000106653 Gm11568A2A4M2 211 aa3.53□□□□□ -1.84
Usp47-201ENSMUST00000106653 Krtap9-1Q64526 186 aa3.53□□□□□ -1.84
Usp47-201ENSMUST00000106653 Gm11559Q9D3H7 191 aa3.51□□□□□ -1.85
Usp47-201ENSMUST00000106653 Gm10229O08631 77 aa3.38□□□□□ -1.87
Usp47-201ENSMUST00000106653 Muc19Q6PZE0 7524 aa3.29□□□□□ -1.88
Usp47-201ENSMUST00000106653 Krtap5-2Q9D5Z7 189 aa3.19□□□□□ -1.9
Usp47-201ENSMUST00000106653 Gm11639A0A1D5RLM8 5808 aa3.14□□□□□ -1.91
Usp47-201ENSMUST00000106653 Phgr1Q8K0G7 91 aa3.09□□□□□ -1.91
Usp47-201ENSMUST00000106653 Gpr98Q8VHN7 6298 aaKnown RBP2.99□□□□□ -1.93
Usp47-201ENSMUST00000106653 Gm4553A0A1B0GSA9 284 aa2.98□□□□□ -1.93
Usp47-201ENSMUST00000106653 Hmcn1D3YXG0 5634 aa2.95□□□□□ -1.94
Usp47-201ENSMUST00000106653 Gm2431E9Q8S1 172 aa2.83□□□□□ -1.96
Usp47-201ENSMUST00000106653 Gm10153A0A1B0GRL1 320 aa2.76□□□□□ -1.97
Usp47-201ENSMUST00000106653 Krtap6-2O08884 159 aa2.73□□□□□ -1.97
Usp47-201ENSMUST00000106653 AhnakE9Q616 5656 aaKnown RBP2.69□□□□□ -1.98
Usp47-201ENSMUST00000106653 A030005L19RikA0A1Y7VIU2 113 aa2.67□□□□□ -1.98
Usp47-201ENSMUST00000106653 Gm45337A0A1B0GS71 263 aa2.62□□□□□ -1.99
Usp47-201ENSMUST00000106653 Gm40460A0A1B0GR10 244 aa2.58□□□□□ -2
Usp47-201ENSMUST00000106653 Gm7579A0A1B0GRJ4 243 aa2.58□□□□□ -2
Usp47-201ENSMUST00000106653 Krtap5-5Q2TA51 241 aa2.58□□□□□ -2
Usp47-201ENSMUST00000106653 Krtap5-4Q62220 223 aa2.58□□□□□ -2
Usp47-201ENSMUST00000106653 Krtap21-1Q925H4 128 aa2.58□□□□□ -2
Usp47-201ENSMUST00000106653 A0A1Y7VJH8 109 aa2.43□□□□□ -2.02
Usp47-201ENSMUST00000106653 Gm39115A0A1B0GSH7 232 aa2.39□□□□□ -2.03
Usp47-201ENSMUST00000106653 A0A1Y7VLE6 161 aa2.24□□□□□ -2.05
Usp47-201ENSMUST00000106653 Gm11567Q9D141 195 aa2.22□□□□□ -2.05
Usp47-201ENSMUST00000106653 A030003K21RikA0A1Y7VIM3 128 aa2.07□□□□□ -2.08
Usp47-201ENSMUST00000106653 Gm45618A0A1B0GSA0 219 aa2.01□□□□□ -2.09
Usp47-201ENSMUST00000106653 Krtap28-10A0A1Y7VP58 119 aa1.99□□□□□ -2.09
Usp47-201ENSMUST00000106653 A030005K14RikA0A1Y7VNY1 122 aa1.97□□□□□ -2.09
Usp47-201ENSMUST00000106653 Gm6217A0A1Y7VJK9 128 aa1.96□□□□□ -2.1
Usp47-201ENSMUST00000106653 Gm29735A0A1B0GT06 219 aa1.95□□□□□ -2.1
Usp47-201ENSMUST00000106653 Krtap28-13A0A087WQP5 138 aa1.95□□□□□ -2.1
Usp47-201ENSMUST00000106653 A0A1Y7VJ07 166 aa1.91□□□□□ -2.1
Usp47-201ENSMUST00000106653 Gm7544A0A1Y7VJ58 118 aa1.87□□□□□ -2.11
Usp47-201ENSMUST00000106653 A030014E15RikA0A1Y7VJV2 120 aa1.75□□□□□ -2.13
Usp47-201ENSMUST00000106653 Krtap5-1Q64507 230 aa1.53□□□□□ -2.16
Usp47-201ENSMUST00000106653 A0A286YCP9 139 aa1.46□□□□□ -2.18
Usp47-201ENSMUST00000106653 Gm4559A4IF42 199 aa1.01□□□□□ -2.25
Retrieved 80 of 22,080 RNA–protein pairs in 7.2 ms