RNA–Protein interactions for RNA: ENSMUST00000102800.7

Gapvd1-202, Transcript of GTPase-activating protein and VPS9 domain-containing protein 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Gapvd1, Length 8,339 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gapvd1-202ENSMUST00000102800 Fat2Q5F226 4351 aa3.59□□□□□ -1.83
Gapvd1-202ENSMUST00000102800 Mdn1A2ANY6 5589 aaKnown RBP3.57□□□□□ -1.84
Gapvd1-202ENSMUST00000102800 Kmt2cQ8BRH4 4903 aa3.56□□□□□ -1.84
Gapvd1-202ENSMUST00000102800 Gm9789Q8BIG3 52 aa3.53□□□□□ -1.84
Gapvd1-202ENSMUST00000102800 Herc1E9PZP8 4859 aa3.52□□□□□ -1.85
Gapvd1-202ENSMUST00000102800 Syne1Q6ZWR6 8799 aa3.47□□□□□ -1.85
Gapvd1-202ENSMUST00000102800 Abca13Q5SSE9 5034 aa3.45□□□□□ -1.86
Gapvd1-202ENSMUST00000102800 4932415D10RikA0A1W2P6U8 4986 aa3.43□□□□□ -1.86
Gapvd1-202ENSMUST00000102800 Krtap4-9B1AQA9 244 aa3.38□□□□□ -1.87
Gapvd1-202ENSMUST00000102800 Mt1P02802 61 aaKnown RBP3.37□□□□□ -1.87
Gapvd1-202ENSMUST00000102800 Krtap4-1Q3UUY3 169 aa3.37□□□□□ -1.87
Gapvd1-202ENSMUST00000102800 Ubr4A2AN08 5180 aa3.37□□□□□ -1.87
Gapvd1-202ENSMUST00000102800 Gm11596B1AQB0 205 aa3.36□□□□□ -1.87
Gapvd1-202ENSMUST00000102800 Rnf213E9Q555 5152 aaKnown RBP3.36□□□□□ -1.87
Gapvd1-202ENSMUST00000102800 Gm11564A2A4L9 201 aa3.35□□□□□ -1.87
Gapvd1-202ENSMUST00000102800 Gm11563B1AQ90 168 aa3.35□□□□□ -1.87
Gapvd1-202ENSMUST00000102800 Gm11595B1AQA7 289 aa3.35□□□□□ -1.87
Gapvd1-202ENSMUST00000102800 Krtap4-8B1AQA8 209 aa3.35□□□□□ -1.87
Gapvd1-202ENSMUST00000102800 Krtap4-13Q9D7P3 165 aa3.33□□□□□ -1.88
Gapvd1-202ENSMUST00000102800 Fat4Q2PZL6 4981 aa3.33□□□□□ -1.88
Gapvd1-202ENSMUST00000102800 ObscnA2AAJ9 8891 aaKnown RBP3.29□□□□□ -1.88
Gapvd1-202ENSMUST00000102800 Syne2Q6ZWQ0 6874 aaKnown RBP3.28□□□□□ -1.88
Gapvd1-202ENSMUST00000102800 Gm11554B1AQB2 190 aa3.21□□□□□ -1.9
Gapvd1-202ENSMUST00000102800 Ush2AQ2QI47 5193 aa3.19□□□□□ -1.9
Gapvd1-202ENSMUST00000102800 ZanO88799 5376 aa3.17□□□□□ -1.9
Gapvd1-202ENSMUST00000102800 Fsip2A2ARZ3 6995 aa3.13□□□□□ -1.91
Gapvd1-202ENSMUST00000102800 Krtap6-3A0A087WQL6 57 aa3.07□□□□□ -1.92
Gapvd1-202ENSMUST00000102800 Krtap17-1A2A5X6 109 aa3.04□□□□□ -1.92
Gapvd1-202ENSMUST00000102800 Hmcn2A2AJ76 5100 aa3.04□□□□□ -1.92
Gapvd1-202ENSMUST00000102800 Muc16A0A140LJ72 8478 aa3.04□□□□□ -1.92
Gapvd1-202ENSMUST00000102800 Muc5bE9Q5I3 4800 aa3.01□□□□□ -1.93
Gapvd1-202ENSMUST00000102800 SspoQ8CG65 4998 aa2.89□□□□□ -1.95
Gapvd1-202ENSMUST00000102800 Gm11555B1AQ89 175 aa2.79□□□□□ -1.96
Gapvd1-202ENSMUST00000102800 Phgr1Q8K0G7 91 aa2.78□□□□□ -1.96
Gapvd1-202ENSMUST00000102800 Krtap20-2E9Q0A8 60 aa2.76□□□□□ -1.97
Gapvd1-202ENSMUST00000102800 Macf1Q9QXZ0 7354 aaKnown RBP2.76□□□□□ -1.97
Gapvd1-202ENSMUST00000102800 Gm11568A2A4M2 211 aa2.76□□□□□ -1.97
Gapvd1-202ENSMUST00000102800 Krtap9-1Q64526 186 aa2.76□□□□□ -1.97
Gapvd1-202ENSMUST00000102800 Gm11559Q9D3H7 191 aa2.76□□□□□ -1.97
Gapvd1-202ENSMUST00000102800 Gm10229O08631 77 aa2.75□□□□□ -1.97
Gapvd1-202ENSMUST00000102800 1110025L11RikO09048 78 aa2.74□□□□□ -1.97
Gapvd1-202ENSMUST00000102800 Krtap6-5Q925H3 78 aa2.74□□□□□ -1.97
Gapvd1-202ENSMUST00000102800 Gm11567Q9D141 195 aa2.67□□□□□ -1.98
Gapvd1-202ENSMUST00000102800 DstQ91ZU6 7393 aaKnown RBP2.62□□□□□ -1.99
Gapvd1-202ENSMUST00000102800 Kmt2dQ6PDK2 5588 aa2.47□□□□□ -2.01
Gapvd1-202ENSMUST00000102800 NebE9Q1W3 7152 aa2.42□□□□□ -2.02
Gapvd1-202ENSMUST00000102800 Eppk1Q8R0W0 6548 aa2.38□□□□□ -2.03
Gapvd1-202ENSMUST00000102800 Muc19Q6PZE0 7524 aa2.33□□□□□ -2.04
Gapvd1-202ENSMUST00000102800 Gpr98Q8VHN7 6298 aaKnown RBP2.19□□□□□ -2.06
Gapvd1-202ENSMUST00000102800 Gm11639A0A1D5RLM8 5808 aa2.1□□□□□ -2.07
Gapvd1-202ENSMUST00000102800 Krtap6-2O08884 159 aa2.07□□□□□ -2.08
Gapvd1-202ENSMUST00000102800 Hmcn1D3YXG0 5634 aa2.02□□□□□ -2.09
Gapvd1-202ENSMUST00000102800 Krtap5-2Q9D5Z7 189 aa1.92□□□□□ -2.1
Gapvd1-202ENSMUST00000102800 A0A1Y7VLE6 161 aa1.89□□□□□ -2.11
Gapvd1-202ENSMUST00000102800 Gm4553A0A1B0GSA9 284 aa1.82□□□□□ -2.12
Gapvd1-202ENSMUST00000102800 A030003K21RikA0A1Y7VIM3 128 aa1.79□□□□□ -2.12
Gapvd1-202ENSMUST00000102800 A0A1Y7VJH8 109 aa1.78□□□□□ -2.12
Gapvd1-202ENSMUST00000102800 Krtap21-1Q925H4 128 aa1.76□□□□□ -2.13
Gapvd1-202ENSMUST00000102800 AhnakE9Q616 5656 aaKnown RBP1.72□□□□□ -2.13
Gapvd1-202ENSMUST00000102800 Gm6217A0A1Y7VJK9 128 aa1.71□□□□□ -2.14
Gapvd1-202ENSMUST00000102800 Gm2431E9Q8S1 172 aa1.7□□□□□ -2.14
Gapvd1-202ENSMUST00000102800 Gm10153A0A1B0GRL1 320 aa1.67□□□□□ -2.14
Gapvd1-202ENSMUST00000102800 A030005L19RikA0A1Y7VIU2 113 aa1.66□□□□□ -2.14
Gapvd1-202ENSMUST00000102800 Krtap28-10A0A1Y7VP58 119 aa1.65□□□□□ -2.14
Gapvd1-202ENSMUST00000102800 Gm45337A0A1B0GS71 263 aa1.61□□□□□ -2.15
Gapvd1-202ENSMUST00000102800 Gm40460A0A1B0GR10 244 aa1.6□□□□□ -2.15
Gapvd1-202ENSMUST00000102800 Gm7579A0A1B0GRJ4 243 aa1.6□□□□□ -2.15
Gapvd1-202ENSMUST00000102800 Krtap5-5Q2TA51 241 aa1.6□□□□□ -2.15
Gapvd1-202ENSMUST00000102800 Krtap5-4Q62220 223 aa1.6□□□□□ -2.15
Gapvd1-202ENSMUST00000102800 Krtap28-13A0A087WQP5 138 aa1.55□□□□□ -2.16
Gapvd1-202ENSMUST00000102800 A030005K14RikA0A1Y7VNY1 122 aa1.52□□□□□ -2.17
Gapvd1-202ENSMUST00000102800 Gm7544A0A1Y7VJ58 118 aa1.49□□□□□ -2.17
Gapvd1-202ENSMUST00000102800 Gm39115A0A1B0GSH7 232 aa1.46□□□□□ -2.18
Gapvd1-202ENSMUST00000102800 A0A1Y7VJ07 166 aa1.44□□□□□ -2.18
Gapvd1-202ENSMUST00000102800 A0A286YCP9 139 aa1.29□□□□□ -2.2
Gapvd1-202ENSMUST00000102800 A030014E15RikA0A1Y7VJV2 120 aa1.28□□□□□ -2.2
Gapvd1-202ENSMUST00000102800 Gm45618A0A1B0GSA0 219 aa1.27□□□□□ -2.21
Gapvd1-202ENSMUST00000102800 Gm29735A0A1B0GT06 219 aa1.19□□□□□ -2.22
Gapvd1-202ENSMUST00000102800 Krtap5-1Q64507 230 aa0.89□□□□□ -2.27
Gapvd1-202ENSMUST00000102800 Gm4559A4IF42 199 aa0.67□□□□□ -2.3
Retrieved 80 of 22,080 RNA–protein pairs in 74.7 ms