RNA–Protein interactions for RNA: ENSMUST00000087258.9

Tro-202, Transcript of Tro protein, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Tro, Length 6,559 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tro-202ENSMUST00000087258 Herc1E9PZP8 4859 aa3.19□□□□□ -1.9
Tro-202ENSMUST00000087258 Ryr3A2AGL3 4863 aa3.18□□□□□ -1.9
Tro-202ENSMUST00000087258 Pkhd1l1Q80ZA4 4249 aa3.15□□□□□ -1.9
Tro-202ENSMUST00000087258 Gm11938Q9D3H4 131 aa3.14□□□□□ -1.91
Tro-202ENSMUST00000087258 Lrp2A2ARV4 4660 aa3.14□□□□□ -1.91
Tro-202ENSMUST00000087258 Mt3P28184 68 aa3.13□□□□□ -1.91
Tro-202ENSMUST00000087258 Kmt2cQ8BRH4 4903 aa3.11□□□□□ -1.91
Tro-202ENSMUST00000087258 Krtap17-1A2A5X6 109 aa3.04□□□□□ -1.92
Tro-202ENSMUST00000087258 Ryr2E9Q401 4966 aaKnown RBP3.03□□□□□ -1.92
Tro-202ENSMUST00000087258 Gm11554B1AQB2 190 aa3.01□□□□□ -1.93
Tro-202ENSMUST00000087258 PcloQ9QYX7 5068 aa2.99□□□□□ -1.93
Tro-202ENSMUST00000087258 Syne2Q6ZWQ0 6874 aaKnown RBP2.9□□□□□ -1.95
Tro-202ENSMUST00000087258 HydinQ80W93 5154 aa2.86□□□□□ -1.95
Tro-202ENSMUST00000087258 Fsip2A2ARZ3 6995 aa2.85□□□□□ -1.95
Tro-202ENSMUST00000087258 Krtap6-3A0A087WQL6 57 aa2.82□□□□□ -1.96
Tro-202ENSMUST00000087258 Mdn1A2ANY6 5589 aaKnown RBP2.75□□□□□ -1.97
Tro-202ENSMUST00000087258 Birc6O88738 4882 aa2.75□□□□□ -1.97
Tro-202ENSMUST00000087258 Hmcn2A2AJ76 5100 aa2.74□□□□□ -1.97
Tro-202ENSMUST00000087258 Syne1Q6ZWR6 8799 aa2.72□□□□□ -1.97
Tro-202ENSMUST00000087258 Muc5bE9Q5I3 4800 aa2.72□□□□□ -1.97
Tro-202ENSMUST00000087258 Kiaa1109A2AAE1 5005 aa2.7□□□□□ -1.98
Tro-202ENSMUST00000087258 Krtap20-2E9Q0A8 60 aa2.68□□□□□ -1.98
Tro-202ENSMUST00000087258 Mt1P02802 61 aaKnown RBP2.67□□□□□ -1.98
Tro-202ENSMUST00000087258 Ubr4A2AN08 5180 aa2.62□□□□□ -1.99
Tro-202ENSMUST00000087258 4932415D10RikA0A1W2P6U8 4986 aa2.59□□□□□ -1.99
Tro-202ENSMUST00000087258 ZanO88799 5376 aa2.58□□□□□ -2
Tro-202ENSMUST00000087258 Fat4Q2PZL6 4981 aa2.56□□□□□ -2
Tro-202ENSMUST00000087258 Gm11555B1AQ89 175 aa2.41□□□□□ -2.02
Tro-202ENSMUST00000087258 Abca13Q5SSE9 5034 aa2.41□□□□□ -2.02
Tro-202ENSMUST00000087258 Rnf213E9Q555 5152 aaKnown RBP2.4□□□□□ -2.02
Tro-202ENSMUST00000087258 SspoQ8CG65 4998 aa2.29□□□□□ -2.04
Tro-202ENSMUST00000087258 1110025L11RikO09048 78 aa2.22□□□□□ -2.05
Tro-202ENSMUST00000087258 Krtap6-5Q925H3 78 aa2.22□□□□□ -2.05
Tro-202ENSMUST00000087258 Gm10229O08631 77 aa2.2□□□□□ -2.06
Tro-202ENSMUST00000087258 Muc16A0A140LJ72 8478 aa2.19□□□□□ -2.06
Tro-202ENSMUST00000087258 Phgr1Q8K0G7 91 aa2.18□□□□□ -2.06
Tro-202ENSMUST00000087258 ObscnA2AAJ9 8891 aaKnown RBP2.17□□□□□ -2.06
Tro-202ENSMUST00000087258 Ush2AQ2QI47 5193 aa2.16□□□□□ -2.06
Tro-202ENSMUST00000087258 NebE9Q1W3 7152 aa2.12□□□□□ -2.07
Tro-202ENSMUST00000087258 DstQ91ZU6 7393 aaKnown RBP2.11□□□□□ -2.07
Tro-202ENSMUST00000087258 Eppk1Q8R0W0 6548 aa2.07□□□□□ -2.08
Tro-202ENSMUST00000087258 Gm11568A2A4M2 211 aa2.07□□□□□ -2.08
Tro-202ENSMUST00000087258 Krtap9-1Q64526 186 aa2.07□□□□□ -2.08
Tro-202ENSMUST00000087258 Gm11559Q9D3H7 191 aa2.07□□□□□ -2.08
Tro-202ENSMUST00000087258 Macf1Q9QXZ0 7354 aaKnown RBP2□□□□□ -2.09
Tro-202ENSMUST00000087258 Kmt2dQ6PDK2 5588 aa1.93□□□□□ -2.1
Tro-202ENSMUST00000087258 A0A1Y7VLE6 161 aa1.92□□□□□ -2.1
Tro-202ENSMUST00000087258 Gm11567Q9D141 195 aa1.91□□□□□ -2.1
Tro-202ENSMUST00000087258 Muc19Q6PZE0 7524 aa1.88□□□□□ -2.11
Tro-202ENSMUST00000087258 A0A1Y7VJH8 109 aa1.78□□□□□ -2.12
Tro-202ENSMUST00000087258 A030003K21RikA0A1Y7VIM3 128 aa1.78□□□□□ -2.12
Tro-202ENSMUST00000087258 Krtap6-2O08884 159 aa1.7□□□□□ -2.14
Tro-202ENSMUST00000087258 Gm6217A0A1Y7VJK9 128 aa1.68□□□□□ -2.14
Tro-202ENSMUST00000087258 Krtap28-10A0A1Y7VP58 119 aa1.67□□□□□ -2.14
Tro-202ENSMUST00000087258 A030005K14RikA0A1Y7VNY1 122 aa1.63□□□□□ -2.15
Tro-202ENSMUST00000087258 Krtap28-13A0A087WQP5 138 aa1.63□□□□□ -2.15
Tro-202ENSMUST00000087258 A0A1Y7VJ07 166 aa1.57□□□□□ -2.16
Tro-202ENSMUST00000087258 Gm7544A0A1Y7VJ58 118 aa1.56□□□□□ -2.16
Tro-202ENSMUST00000087258 Gpr98Q8VHN7 6298 aaKnown RBP1.53□□□□□ -2.16
Tro-202ENSMUST00000087258 A030005L19RikA0A1Y7VIU2 113 aa1.53□□□□□ -2.16
Tro-202ENSMUST00000087258 Krtap21-1Q925H4 128 aa1.46□□□□□ -2.18
Tro-202ENSMUST00000087258 Gm11639A0A1D5RLM8 5808 aa1.41□□□□□ -2.18
Tro-202ENSMUST00000087258 Krtap5-2Q9D5Z7 189 aa1.39□□□□□ -2.19
Tro-202ENSMUST00000087258 A030014E15RikA0A1Y7VJV2 120 aa1.38□□□□□ -2.19
Tro-202ENSMUST00000087258 Hmcn1D3YXG0 5634 aa1.34□□□□□ -2.2
Tro-202ENSMUST00000087258 Gm2431E9Q8S1 172 aa1.33□□□□□ -2.2
Tro-202ENSMUST00000087258 Gm4553A0A1B0GSA9 284 aa1.31□□□□□ -2.2
Tro-202ENSMUST00000087258 A0A286YCP9 139 aa1.19□□□□□ -2.22
Tro-202ENSMUST00000087258 AhnakE9Q616 5656 aaKnown RBP1.1□□□□□ -2.23
Tro-202ENSMUST00000087258 Gm10153A0A1B0GRL1 320 aa1.07□□□□□ -2.24
Tro-202ENSMUST00000087258 Gm40460A0A1B0GR10 244 aa1.04□□□□□ -2.24
Tro-202ENSMUST00000087258 Gm7579A0A1B0GRJ4 243 aa1.04□□□□□ -2.24
Tro-202ENSMUST00000087258 Krtap5-5Q2TA51 241 aa1.04□□□□□ -2.24
Tro-202ENSMUST00000087258 Krtap5-4Q62220 223 aa1.04□□□□□ -2.24
Tro-202ENSMUST00000087258 Gm45337A0A1B0GS71 263 aa1.02□□□□□ -2.25
Tro-202ENSMUST00000087258 Gm39115A0A1B0GSH7 232 aa0.97□□□□□ -2.25
Tro-202ENSMUST00000087258 Gm45618A0A1B0GSA0 219 aa0.91□□□□□ -2.26
Tro-202ENSMUST00000087258 Krtap5-1Q64507 230 aa0.88□□□□□ -2.27
Tro-202ENSMUST00000087258 Gm29735A0A1B0GT06 219 aa0.8□□□□□ -2.28
Tro-202ENSMUST00000087258 Gm4559A4IF42 199 aa0.53□□□□□ -2.32
Retrieved 80 of 22,080 RNA–protein pairs in 136.5 ms