RNA–Protein interactions for RNA: ENSMUST00000084524.3

Prpf4-201, Transcript of U4/U6 small nuclear ribonucleoprotein Prp4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf4, Length 5,223 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf4-201ENSMUST00000084524 ZanO88799 5376 aa2.94□□□□□ -1.94
Prpf4-201ENSMUST00000084524 Rnf213E9Q555 5152 aaKnown RBP2.94□□□□□ -1.94
Prpf4-201ENSMUST00000084524 Krtap19-4Q925H7 84 aa2.92□□□□□ -1.94
Prpf4-201ENSMUST00000084524 Krtap9-3Q3V2C1 136 aa2.9□□□□□ -1.95
Prpf4-201ENSMUST00000084524 A0A286YCP9 139 aa2.88□□□□□ -1.95
Prpf4-201ENSMUST00000084524 Lce1a2Q9D1K4 149 aa2.88□□□□□ -1.95
Prpf4-201ENSMUST00000084524 Ush2AQ2QI47 5193 aa2.87□□□□□ -1.95
Prpf4-201ENSMUST00000084524 Krtap4-2B1AQ85 167 aa2.86□□□□□ -1.95
Prpf4-201ENSMUST00000084524 Mt4P47945 62 aa2.85□□□□□ -1.95
Prpf4-201ENSMUST00000084524 Krtap17-1A2A5X6 109 aa2.85□□□□□ -1.95
Prpf4-201ENSMUST00000084524 SspoQ8CG65 4998 aa2.84□□□□□ -1.95
Prpf4-201ENSMUST00000084524 Fat4Q2PZL6 4981 aa2.82□□□□□ -1.96
Prpf4-201ENSMUST00000084524 Mdn1A2ANY6 5589 aaKnown RBP2.82□□□□□ -1.96
Prpf4-201ENSMUST00000084524 Ubr4A2AN08 5180 aa2.8□□□□□ -1.96
Prpf4-201ENSMUST00000084524 Krtap4-6Q3V4B7 195 aa2.8□□□□□ -1.96
Prpf4-201ENSMUST00000084524 Gm11563B1AQ90 168 aa2.75□□□□□ -1.97
Prpf4-201ENSMUST00000084524 Krtap4-7Q9D732 168 aa2.75□□□□□ -1.97
Prpf4-201ENSMUST00000084524 Muc5bE9Q5I3 4800 aa2.67□□□□□ -1.98
Prpf4-201ENSMUST00000084524 Gm11596B1AQB0 205 aa2.67□□□□□ -1.98
Prpf4-201ENSMUST00000084524 Gm11564A2A4L9 201 aa2.64□□□□□ -1.99
Prpf4-201ENSMUST00000084524 Gm11595B1AQA7 289 aa2.64□□□□□ -1.99
Prpf4-201ENSMUST00000084524 Krtap4-8B1AQA8 209 aa2.64□□□□□ -1.99
Prpf4-201ENSMUST00000084524 Sprr2hO70559 108 aa2.64□□□□□ -1.99
Prpf4-201ENSMUST00000084524 2300003K06RikA2A4M0 262 aa2.63□□□□□ -1.99
Prpf4-201ENSMUST00000084524 Gm11562A0PK51 136 aa2.63□□□□□ -1.99
Prpf4-201ENSMUST00000084524 Sprr2dO70555 85 aa2.63□□□□□ -1.99
Prpf4-201ENSMUST00000084524 Krtap4-9B1AQA9 244 aa2.62□□□□□ -1.99
Prpf4-201ENSMUST00000084524 Gm11938Q9D3H4 131 aa2.61□□□□□ -1.99
Prpf4-201ENSMUST00000084524 Syne1Q6ZWR6 8799 aa2.59□□□□□ -2
Prpf4-201ENSMUST00000084524 Gm11555B1AQ89 175 aa2.57□□□□□ -2
Prpf4-201ENSMUST00000084524 Krtap31-1Q9D644 177 aa2.57□□□□□ -2
Prpf4-201ENSMUST00000084524 Krtap4-13Q9D7P3 165 aa2.55□□□□□ -2
Prpf4-201ENSMUST00000084524 Lce1kJ3QP15 125 aa2.54□□□□□ -2
Prpf4-201ENSMUST00000084524 Mt3P28184 68 aa2.53□□□□□ -2
Prpf4-201ENSMUST00000084524 Syne2Q6ZWQ0 6874 aaKnown RBP2.45□□□□□ -2.02
Prpf4-201ENSMUST00000084524 Krtap6-3A0A087WQL6 57 aa2.43□□□□□ -2.02
Prpf4-201ENSMUST00000084524 Fsip2A2ARZ3 6995 aa2.42□□□□□ -2.02
Prpf4-201ENSMUST00000084524 Lce1a1Q9CQH5 143 aa2.4□□□□□ -2.03
Prpf4-201ENSMUST00000084524 Eppk1Q8R0W0 6548 aa2.36□□□□□ -2.03
Prpf4-201ENSMUST00000084524 Mt1P02802 61 aaKnown RBP2.33□□□□□ -2.04
Prpf4-201ENSMUST00000084524 Gm11554B1AQB2 190 aa2.29□□□□□ -2.04
Prpf4-201ENSMUST00000084524 Krtap4-16Q91W93 202 aa2.29□□□□□ -2.04
Prpf4-201ENSMUST00000084524 Sprr2bO70554 98 aa2.26□□□□□ -2.05
Prpf4-201ENSMUST00000084524 Krtap31-2Q8CAY5 177 aa2.24□□□□□ -2.05
Prpf4-201ENSMUST00000084524 Krtap20-2E9Q0A8 60 aa2.22□□□□□ -2.05
Prpf4-201ENSMUST00000084524 ObscnA2AAJ9 8891 aaKnown RBP2.21□□□□□ -2.06
Prpf4-201ENSMUST00000084524 Muc16A0A140LJ72 8478 aa2.11□□□□□ -2.07
Prpf4-201ENSMUST00000084524 Kmt2dQ6PDK2 5588 aa2.08□□□□□ -2.08
Prpf4-201ENSMUST00000084524 DstQ91ZU6 7393 aaKnown RBP2.01□□□□□ -2.09
Prpf4-201ENSMUST00000084524 Macf1Q9QXZ0 7354 aaKnown RBP1.99□□□□□ -2.09
Prpf4-201ENSMUST00000084524 NebE9Q1W3 7152 aa1.96□□□□□ -2.1
Prpf4-201ENSMUST00000084524 Gm11568A2A4M2 211 aa1.9□□□□□ -2.11
Prpf4-201ENSMUST00000084524 1110025L11RikO09048 78 aa1.9□□□□□ -2.11
Prpf4-201ENSMUST00000084524 Krtap9-1Q64526 186 aa1.9□□□□□ -2.11
Prpf4-201ENSMUST00000084524 Krtap6-5Q925H3 78 aa1.9□□□□□ -2.11
Prpf4-201ENSMUST00000084524 Gpr98Q8VHN7 6298 aaKnown RBP1.9□□□□□ -2.11
Prpf4-201ENSMUST00000084524 Krtap5-2Q9D5Z7 189 aa1.84□□□□□ -2.12
Prpf4-201ENSMUST00000084524 Gm11639A0A1D5RLM8 5808 aa1.82□□□□□ -2.12
Prpf4-201ENSMUST00000084524 Gm10153A0A1B0GRL1 320 aa1.81□□□□□ -2.12
Prpf4-201ENSMUST00000084524 Gm10229O08631 77 aa1.81□□□□□ -2.12
Prpf4-201ENSMUST00000084524 Gm11559Q9D3H7 191 aa1.8□□□□□ -2.12
Prpf4-201ENSMUST00000084524 Muc19Q6PZE0 7524 aa1.7□□□□□ -2.14
Prpf4-201ENSMUST00000084524 Gm45618A0A1B0GSA0 219 aa1.69□□□□□ -2.14
Prpf4-201ENSMUST00000084524 Gm45337A0A1B0GS71 263 aa1.67□□□□□ -2.14
Prpf4-201ENSMUST00000084524 Gm4553A0A1B0GSA9 284 aa1.65□□□□□ -2.15
Prpf4-201ENSMUST00000084524 Phgr1Q8K0G7 91 aa1.65□□□□□ -2.15
Prpf4-201ENSMUST00000084524 Gm40460A0A1B0GR10 244 aa1.63□□□□□ -2.15
Prpf4-201ENSMUST00000084524 Gm7579A0A1B0GRJ4 243 aa1.63□□□□□ -2.15
Prpf4-201ENSMUST00000084524 Krtap5-5Q2TA51 241 aa1.63□□□□□ -2.15
Prpf4-201ENSMUST00000084524 Krtap5-4Q62220 223 aa1.63□□□□□ -2.15
Prpf4-201ENSMUST00000084524 Gm2431E9Q8S1 172 aa1.6□□□□□ -2.15
Prpf4-201ENSMUST00000084524 Hmcn1D3YXG0 5634 aa1.59□□□□□ -2.15
Prpf4-201ENSMUST00000084524 Gm39115A0A1B0GSH7 232 aa1.57□□□□□ -2.16
Prpf4-201ENSMUST00000084524 AhnakE9Q616 5656 aaKnown RBP1.46□□□□□ -2.18
Prpf4-201ENSMUST00000084524 Krtap6-2O08884 159 aa1.45□□□□□ -2.18
Prpf4-201ENSMUST00000084524 Gm29735A0A1B0GT06 219 aa1.44□□□□□ -2.18
Prpf4-201ENSMUST00000084524 Krtap21-1Q925H4 128 aa1.33□□□□□ -2.2
Prpf4-201ENSMUST00000084524 Krtap5-1Q64507 230 aa1.32□□□□□ -2.2
Prpf4-201ENSMUST00000084524 Gm11567Q9D141 195 aa1.27□□□□□ -2.21
Prpf4-201ENSMUST00000084524 Gm4559A4IF42 199 aa1.07□□□□□ -2.24
Retrieved 80 of 22,080 RNA–protein pairs in 128.7 ms