RNA–Protein interactions for RNA: ENSMUST00000072755.11

Col18a1-201, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col18a1, Length 5,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-201ENSMUST00000072755 Gm11938Q9D3H4 131 aa4,22□□□□□ -1,73
Col18a1-201ENSMUST00000072755 Krtap4-1Q3UUY3 169 aa4,2□□□□□ -1,74
Col18a1-201ENSMUST00000072755 Gm11562A0PK51 136 aa4,19□□□□□ -1,74
Col18a1-201ENSMUST00000072755 Ubr4A2AN08 5180 aa4,19□□□□□ -1,74
Col18a1-201ENSMUST00000072755 Fat4Q2PZL6 4981 aa4,18□□□□□ -1,74
Col18a1-201ENSMUST00000072755 ZanO88799 5376 aa4,17□□□□□ -1,74
Col18a1-201ENSMUST00000072755 Syne2Q6ZWQ0 6874 aaKnown RBP4,17□□□□□ -1,74
Col18a1-201ENSMUST00000072755 Krtap4-16Q91W93 202 aa4,15□□□□□ -1,75
Col18a1-201ENSMUST00000072755 Sprr2dO70555 85 aa4,13□□□□□ -1,75
Col18a1-201ENSMUST00000072755 Ush2AQ2QI47 5193 aa4,12□□□□□ -1,75
Col18a1-201ENSMUST00000072755 Gm11564A2A4L9 201 aa4,11□□□□□ -1,75
Col18a1-201ENSMUST00000072755 Gm11563B1AQ90 168 aa4,11□□□□□ -1,75
Col18a1-201ENSMUST00000072755 Gm11595B1AQA7 289 aa4,11□□□□□ -1,75
Col18a1-201ENSMUST00000072755 Krtap4-8B1AQA8 209 aa4,11□□□□□ -1,75
Col18a1-201ENSMUST00000072755 2300003K06RikA2A4M0 262 aa4,08□□□□□ -1,76
Col18a1-201ENSMUST00000072755 Sprr2hO70559 108 aa4,08□□□□□ -1,76
Col18a1-201ENSMUST00000072755 Muc5bE9Q5I3 4800 aa4,07□□□□□ -1,76
Col18a1-201ENSMUST00000072755 Krtap4-9B1AQA9 244 aa4,06□□□□□ -1,76
Col18a1-201ENSMUST00000072755 Fsip2A2ARZ3 6995 aa4,05□□□□□ -1,76
Col18a1-201ENSMUST00000072755 Hmcn2A2AJ76 5100 aa4,04□□□□□ -1,76
Col18a1-201ENSMUST00000072755 Krtap4-7Q9D732 168 aa4,03□□□□□ -1,76
Col18a1-201ENSMUST00000072755 Krtap4-13Q9D7P3 165 aa3,95□□□□□ -1,78
Col18a1-201ENSMUST00000072755 Lce1kJ3QP15 125 aa3,94□□□□□ -1,78
Col18a1-201ENSMUST00000072755 Mt3P28184 68 aa3,87□□□□□ -1,79
Col18a1-201ENSMUST00000072755 Krtap6-3A0A087WQL6 57 aa3,81□□□□□ -1,8
Col18a1-201ENSMUST00000072755 SspoQ8CG65 4998 aa3,75□□□□□ -1,81
Col18a1-201ENSMUST00000072755 Lce1a1Q9CQH5 143 aa3,74□□□□□ -1,81
Col18a1-201ENSMUST00000072755 Eppk1Q8R0W0 6548 aa3,66□□□□□ -1,82
Col18a1-201ENSMUST00000072755 Macf1Q9QXZ0 7354 aaKnown RBP3,6□□□□□ -1,83
Col18a1-201ENSMUST00000072755 Mt1P02802 61 aaKnown RBP3,57□□□□□ -1,84
Col18a1-201ENSMUST00000072755 Gm11554B1AQB2 190 aa3,52□□□□□ -1,85
Col18a1-201ENSMUST00000072755 Muc16A0A140LJ72 8478 aa3,49□□□□□ -1,85
Col18a1-201ENSMUST00000072755 Gm11555B1AQ89 175 aa3,46□□□□□ -1,86
Col18a1-201ENSMUST00000072755 Krtap20-2E9Q0A8 60 aa3,45□□□□□ -1,86
Col18a1-201ENSMUST00000072755 Sprr2bO70554 98 aa3,44□□□□□ -1,86
Col18a1-201ENSMUST00000072755 DstQ91ZU6 7393 aaKnown RBP3,4□□□□□ -1,86
Col18a1-201ENSMUST00000072755 NebE9Q1W3 7152 aa3,34□□□□□ -1,88
Col18a1-201ENSMUST00000072755 ObscnA2AAJ9 8891 aaKnown RBP3,33□□□□□ -1,88
Col18a1-201ENSMUST00000072755 Gpr98Q8VHN7 6298 aaKnown RBP3,11□□□□□ -1,91
Col18a1-201ENSMUST00000072755 Kmt2dQ6PDK2 5588 aa3,09□□□□□ -1,92
Col18a1-201ENSMUST00000072755 Gm11639A0A1D5RLM8 5808 aa3□□□□□ -1,93
Col18a1-201ENSMUST00000072755 1110025L11RikO09048 78 aa2,94□□□□□ -1,94
Col18a1-201ENSMUST00000072755 Krtap6-5Q925H3 78 aa2,94□□□□□ -1,94
Col18a1-201ENSMUST00000072755 Gm11559Q9D3H7 191 aa2,86□□□□□ -1,95
Col18a1-201ENSMUST00000072755 Muc19Q6PZE0 7524 aa2,83□□□□□ -1,96
Col18a1-201ENSMUST00000072755 Gm11568A2A4M2 211 aa2,82□□□□□ -1,96
Col18a1-201ENSMUST00000072755 Krtap9-1Q64526 186 aa2,81□□□□□ -1,96
Col18a1-201ENSMUST00000072755 Gm10229O08631 77 aa2,78□□□□□ -1,96
Col18a1-201ENSMUST00000072755 Phgr1Q8K0G7 91 aa2,67□□□□□ -1,98
Col18a1-201ENSMUST00000072755 Hmcn1D3YXG0 5634 aa2,63□□□□□ -1,99
Col18a1-201ENSMUST00000072755 Krtap5-2Q9D5Z7 189 aa2,55□□□□□ -2
Col18a1-201ENSMUST00000072755 Gm11567Q9D141 195 aa2,5□□□□□ -2,01
Col18a1-201ENSMUST00000072755 A030005L19RikA0A1Y7VIU2 113 aa2,46□□□□□ -2,02
Col18a1-201ENSMUST00000072755 Gm4553A0A1B0GSA9 284 aa2,43□□□□□ -2,02
Col18a1-201ENSMUST00000072755 AhnakE9Q616 5656 aaKnown RBP2,34□□□□□ -2,04
Col18a1-201ENSMUST00000072755 Gm2431E9Q8S1 172 aa2,3□□□□□ -2,04
Col18a1-201ENSMUST00000072755 Krtap6-2O08884 159 aa2,23□□□□□ -2,05
Col18a1-201ENSMUST00000072755 Gm10153A0A1B0GRL1 320 aa2,21□□□□□ -2,06
Col18a1-201ENSMUST00000072755 Gm45337A0A1B0GS71 263 aa2,09□□□□□ -2,07
Col18a1-201ENSMUST00000072755 Krtap21-1Q925H4 128 aa2,09□□□□□ -2,07
Col18a1-201ENSMUST00000072755 A0A1Y7VJH8 109 aa2,08□□□□□ -2,08
Col18a1-201ENSMUST00000072755 Gm40460A0A1B0GR10 244 aa2,08□□□□□ -2,08
Col18a1-201ENSMUST00000072755 Gm7579A0A1B0GRJ4 243 aa2,08□□□□□ -2,08
Col18a1-201ENSMUST00000072755 Krtap5-5Q2TA51 241 aa2,08□□□□□ -2,08
Col18a1-201ENSMUST00000072755 Krtap5-4Q62220 223 aa2,08□□□□□ -2,08
Col18a1-201ENSMUST00000072755 Gm39115A0A1B0GSH7 232 aa2□□□□□ -2,09
Col18a1-201ENSMUST00000072755 Gm45618A0A1B0GSA0 219 aa1,84□□□□□ -2,11
Col18a1-201ENSMUST00000072755 A0A1Y7VLE6 161 aa1,78□□□□□ -2,12
Col18a1-201ENSMUST00000072755 Gm29735A0A1B0GT06 219 aa1,58□□□□□ -2,16
Col18a1-201ENSMUST00000072755 Krtap5-1Q64507 230 aa1,38□□□□□ -2,19
Col18a1-201ENSMUST00000072755 A0A1Y7VJ07 166 aa1,06□□□□□ -2,24
Col18a1-201ENSMUST00000072755 A0A286YCP9 139 aa0,93□□□□□ -2,26
Col18a1-201ENSMUST00000072755 Gm4559A4IF42 199 aa0,84□□□□□ -2,28
Col18a1-201ENSMUST00000072755 A030003K21RikA0A1Y7VIM3 128 aa0,73□□□□□ -2,29
Col18a1-201ENSMUST00000072755 Gm6217A0A1Y7VJK9 128 aa0,57□□□□□ -2,32
Col18a1-201ENSMUST00000072755 Krtap28-10A0A1Y7VP58 119 aa0,52□□□□□ -2,33
Col18a1-201ENSMUST00000072755 Krtap28-13A0A087WQP5 138 aa0,47□□□□□ -2,33
Col18a1-201ENSMUST00000072755 A030014E15RikA0A1Y7VJV2 120 aa0,44□□□□□ -2,34
Col18a1-201ENSMUST00000072755 A030005K14RikA0A1Y7VNY1 122 aa0,17□□□□□ -2,38
Col18a1-201ENSMUST00000072755 Gm7544A0A1Y7VJ58 118 aa0,06□□□□□ -2,4
Retrieved 80 of 22,080 RNA–protein pairs in 63 ms