RNA–Protein interactions for RNA: ENSMUST00000072755.11

Col18a1-201, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col18a1, Length 5,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-201ENSMUST00000072755 Gm11938Q9D3H4 131 aa4.22□□□□□ -1.73
Col18a1-201ENSMUST00000072755 Krtap4-1Q3UUY3 169 aa4.2□□□□□ -1.74
Col18a1-201ENSMUST00000072755 Gm11562A0PK51 136 aa4.19□□□□□ -1.74
Col18a1-201ENSMUST00000072755 Ubr4A2AN08 5180 aa4.19□□□□□ -1.74
Col18a1-201ENSMUST00000072755 Fat4Q2PZL6 4981 aa4.18□□□□□ -1.74
Col18a1-201ENSMUST00000072755 ZanO88799 5376 aa4.17□□□□□ -1.74
Col18a1-201ENSMUST00000072755 Syne2Q6ZWQ0 6874 aaKnown RBP4.17□□□□□ -1.74
Col18a1-201ENSMUST00000072755 Krtap4-16Q91W93 202 aa4.15□□□□□ -1.75
Col18a1-201ENSMUST00000072755 Sprr2dO70555 85 aa4.13□□□□□ -1.75
Col18a1-201ENSMUST00000072755 Ush2AQ2QI47 5193 aa4.12□□□□□ -1.75
Col18a1-201ENSMUST00000072755 Gm11564A2A4L9 201 aa4.11□□□□□ -1.75
Col18a1-201ENSMUST00000072755 Gm11563B1AQ90 168 aa4.11□□□□□ -1.75
Col18a1-201ENSMUST00000072755 Gm11595B1AQA7 289 aa4.11□□□□□ -1.75
Col18a1-201ENSMUST00000072755 Krtap4-8B1AQA8 209 aa4.11□□□□□ -1.75
Col18a1-201ENSMUST00000072755 2300003K06RikA2A4M0 262 aa4.08□□□□□ -1.76
Col18a1-201ENSMUST00000072755 Sprr2hO70559 108 aa4.08□□□□□ -1.76
Col18a1-201ENSMUST00000072755 Muc5bE9Q5I3 4800 aa4.07□□□□□ -1.76
Col18a1-201ENSMUST00000072755 Krtap4-9B1AQA9 244 aa4.06□□□□□ -1.76
Col18a1-201ENSMUST00000072755 Fsip2A2ARZ3 6995 aa4.05□□□□□ -1.76
Col18a1-201ENSMUST00000072755 Hmcn2A2AJ76 5100 aa4.04□□□□□ -1.76
Col18a1-201ENSMUST00000072755 Krtap4-7Q9D732 168 aa4.03□□□□□ -1.76
Col18a1-201ENSMUST00000072755 Krtap4-13Q9D7P3 165 aa3.95□□□□□ -1.78
Col18a1-201ENSMUST00000072755 Lce1kJ3QP15 125 aa3.94□□□□□ -1.78
Col18a1-201ENSMUST00000072755 Mt3P28184 68 aa3.87□□□□□ -1.79
Col18a1-201ENSMUST00000072755 Krtap6-3A0A087WQL6 57 aa3.81□□□□□ -1.8
Col18a1-201ENSMUST00000072755 SspoQ8CG65 4998 aa3.75□□□□□ -1.81
Col18a1-201ENSMUST00000072755 Lce1a1Q9CQH5 143 aa3.74□□□□□ -1.81
Col18a1-201ENSMUST00000072755 Eppk1Q8R0W0 6548 aa3.66□□□□□ -1.82
Col18a1-201ENSMUST00000072755 Macf1Q9QXZ0 7354 aaKnown RBP3.6□□□□□ -1.83
Col18a1-201ENSMUST00000072755 Mt1P02802 61 aaKnown RBP3.57□□□□□ -1.84
Col18a1-201ENSMUST00000072755 Gm11554B1AQB2 190 aa3.52□□□□□ -1.85
Col18a1-201ENSMUST00000072755 Muc16A0A140LJ72 8478 aa3.49□□□□□ -1.85
Col18a1-201ENSMUST00000072755 Gm11555B1AQ89 175 aa3.46□□□□□ -1.86
Col18a1-201ENSMUST00000072755 Krtap20-2E9Q0A8 60 aa3.45□□□□□ -1.86
Col18a1-201ENSMUST00000072755 Sprr2bO70554 98 aa3.44□□□□□ -1.86
Col18a1-201ENSMUST00000072755 DstQ91ZU6 7393 aaKnown RBP3.4□□□□□ -1.86
Col18a1-201ENSMUST00000072755 NebE9Q1W3 7152 aa3.34□□□□□ -1.88
Col18a1-201ENSMUST00000072755 ObscnA2AAJ9 8891 aaKnown RBP3.33□□□□□ -1.88
Col18a1-201ENSMUST00000072755 Gpr98Q8VHN7 6298 aaKnown RBP3.11□□□□□ -1.91
Col18a1-201ENSMUST00000072755 Kmt2dQ6PDK2 5588 aa3.09□□□□□ -1.92
Col18a1-201ENSMUST00000072755 Gm11639A0A1D5RLM8 5808 aa3□□□□□ -1.93
Col18a1-201ENSMUST00000072755 1110025L11RikO09048 78 aa2.94□□□□□ -1.94
Col18a1-201ENSMUST00000072755 Krtap6-5Q925H3 78 aa2.94□□□□□ -1.94
Col18a1-201ENSMUST00000072755 Gm11559Q9D3H7 191 aa2.86□□□□□ -1.95
Col18a1-201ENSMUST00000072755 Muc19Q6PZE0 7524 aa2.83□□□□□ -1.96
Col18a1-201ENSMUST00000072755 Gm11568A2A4M2 211 aa2.82□□□□□ -1.96
Col18a1-201ENSMUST00000072755 Krtap9-1Q64526 186 aa2.81□□□□□ -1.96
Col18a1-201ENSMUST00000072755 Gm10229O08631 77 aa2.78□□□□□ -1.96
Col18a1-201ENSMUST00000072755 Phgr1Q8K0G7 91 aa2.67□□□□□ -1.98
Col18a1-201ENSMUST00000072755 Hmcn1D3YXG0 5634 aa2.63□□□□□ -1.99
Col18a1-201ENSMUST00000072755 Krtap5-2Q9D5Z7 189 aa2.55□□□□□ -2
Col18a1-201ENSMUST00000072755 Gm11567Q9D141 195 aa2.5□□□□□ -2.01
Col18a1-201ENSMUST00000072755 A030005L19RikA0A1Y7VIU2 113 aa2.46□□□□□ -2.02
Col18a1-201ENSMUST00000072755 Gm4553A0A1B0GSA9 284 aa2.43□□□□□ -2.02
Col18a1-201ENSMUST00000072755 AhnakE9Q616 5656 aaKnown RBP2.34□□□□□ -2.04
Col18a1-201ENSMUST00000072755 Gm2431E9Q8S1 172 aa2.3□□□□□ -2.04
Col18a1-201ENSMUST00000072755 Krtap6-2O08884 159 aa2.23□□□□□ -2.05
Col18a1-201ENSMUST00000072755 Gm10153A0A1B0GRL1 320 aa2.21□□□□□ -2.06
Col18a1-201ENSMUST00000072755 Gm45337A0A1B0GS71 263 aa2.09□□□□□ -2.07
Col18a1-201ENSMUST00000072755 Krtap21-1Q925H4 128 aa2.09□□□□□ -2.07
Col18a1-201ENSMUST00000072755 A0A1Y7VJH8 109 aa2.08□□□□□ -2.08
Col18a1-201ENSMUST00000072755 Gm40460A0A1B0GR10 244 aa2.08□□□□□ -2.08
Col18a1-201ENSMUST00000072755 Gm7579A0A1B0GRJ4 243 aa2.08□□□□□ -2.08
Col18a1-201ENSMUST00000072755 Krtap5-5Q2TA51 241 aa2.08□□□□□ -2.08
Col18a1-201ENSMUST00000072755 Krtap5-4Q62220 223 aa2.08□□□□□ -2.08
Col18a1-201ENSMUST00000072755 Gm39115A0A1B0GSH7 232 aa2□□□□□ -2.09
Col18a1-201ENSMUST00000072755 Gm45618A0A1B0GSA0 219 aa1.84□□□□□ -2.11
Col18a1-201ENSMUST00000072755 A0A1Y7VLE6 161 aa1.78□□□□□ -2.12
Col18a1-201ENSMUST00000072755 Gm29735A0A1B0GT06 219 aa1.58□□□□□ -2.16
Col18a1-201ENSMUST00000072755 Krtap5-1Q64507 230 aa1.38□□□□□ -2.19
Col18a1-201ENSMUST00000072755 A0A1Y7VJ07 166 aa1.06□□□□□ -2.24
Col18a1-201ENSMUST00000072755 A0A286YCP9 139 aa0.93□□□□□ -2.26
Col18a1-201ENSMUST00000072755 Gm4559A4IF42 199 aa0.84□□□□□ -2.28
Col18a1-201ENSMUST00000072755 A030003K21RikA0A1Y7VIM3 128 aa0.73□□□□□ -2.29
Col18a1-201ENSMUST00000072755 Gm6217A0A1Y7VJK9 128 aa0.57□□□□□ -2.32
Col18a1-201ENSMUST00000072755 Krtap28-10A0A1Y7VP58 119 aa0.52□□□□□ -2.33
Col18a1-201ENSMUST00000072755 Krtap28-13A0A087WQP5 138 aa0.47□□□□□ -2.33
Col18a1-201ENSMUST00000072755 A030014E15RikA0A1Y7VJV2 120 aa0.44□□□□□ -2.34
Col18a1-201ENSMUST00000072755 A030005K14RikA0A1Y7VNY1 122 aa0.17□□□□□ -2.38
Col18a1-201ENSMUST00000072755 Gm7544A0A1Y7VJ58 118 aa0.06□□□□□ -2.4
Retrieved 80 of 22,080 RNA–protein pairs in 23.4 ms