RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Krtap17-1A2A5X6 109 aa3.03□□□□□ -1.92
Ccdc54-201ENSMUST00000062439 Krtap13-1Q8K198 168 aa3□□□□□ -1.93
Ccdc54-201ENSMUST00000062439 SspoQ8CG65 4998 aa2.99□□□□□ -1.93
Ccdc54-201ENSMUST00000062439 Coa5Q99M07 74 aa2.96□□□□□ -1.94
Ccdc54-201ENSMUST00000062439 Gm10999F6Q4M4 69 aa2.94□□□□□ -1.94
Ccdc54-201ENSMUST00000062439 Gm11564A2A4L9 201 aa2.93□□□□□ -1.94
Ccdc54-201ENSMUST00000062439 Lce3eF8VQJ0 98 aa2.93□□□□□ -1.94
Ccdc54-201ENSMUST00000062439 Atox1O08997 68 aaKnown RBP2.93□□□□□ -1.94
Ccdc54-201ENSMUST00000062439 2310079G19RikQ9D6L6 185 aa2.91□□□□□ -1.94
Ccdc54-201ENSMUST00000062439 Defb38Q7TNV7 63 aa2.87□□□□□ -1.95
Ccdc54-201ENSMUST00000062439 Ndufc1Q9CQY9 76 aa2.87□□□□□ -1.95
Ccdc54-201ENSMUST00000062439 Gm21798J3QNU5 87 aa2.85□□□□□ -1.95
Ccdc54-201ENSMUST00000062439 Krtap19-2Q925I0 141 aa2.85□□□□□ -1.95
Ccdc54-201ENSMUST00000062439 Gm19426M0QWC7 77 aa2.84□□□□□ -1.95
Ccdc54-201ENSMUST00000062439 Ndufb1P0DN34 57 aa2.81□□□□□ -1.96
Ccdc54-201ENSMUST00000062439 Muc5bE9Q5I3 4800 aa2.77□□□□□ -1.97
Ccdc54-201ENSMUST00000062439 Gm17606F6ZL36 78 aa2.77□□□□□ -1.97
Ccdc54-201ENSMUST00000062439 Defb1P56386 69 aa2.77□□□□□ -1.97
Ccdc54-201ENSMUST00000062439 Krtap5-5Q2TA51 241 aa2.77□□□□□ -1.97
Ccdc54-201ENSMUST00000062439 Cox6b2Q80ZN9 88 aa2.77□□□□□ -1.97
Ccdc54-201ENSMUST00000062439 Syne2Q6ZWQ0 6874 aaKnown RBP2.76□□□□□ -1.97
Ccdc54-201ENSMUST00000062439 SptssbQ925E8 76 aa2.76□□□□□ -1.97
Ccdc54-201ENSMUST00000062439 Krtap6-5Q925H3 78 aa2.76□□□□□ -1.97
Ccdc54-201ENSMUST00000062439 Krtap19-9aF8WH65 55 aa2.75□□□□□ -1.97
Ccdc54-201ENSMUST00000062439 BC029722A0A0N4SW31 51 aa2.74□□□□□ -1.97
Ccdc54-201ENSMUST00000062439 Gm20537G3UYK7 97 aa2.74□□□□□ -1.97
Ccdc54-201ENSMUST00000062439 Gm6358A0A087WPH4 74 aa2.73□□□□□ -1.97
Ccdc54-201ENSMUST00000062439 CriptO70333 101 aa2.72□□□□□ -1.97
Ccdc54-201ENSMUST00000062439 Kmt2dQ6PDK2 5588 aa2.72□□□□□ -1.97
Ccdc54-201ENSMUST00000062439 Gm10382Q3V0T5 144 aa2.7□□□□□ -1.98
Ccdc54-201ENSMUST00000062439 Spink7Q6IE32 76 aa2.68□□□□□ -1.98
Ccdc54-201ENSMUST00000062439 Gm9955Q8CEJ8 102 aa2.63□□□□□ -1.99
Ccdc54-201ENSMUST00000062439 Mdn1A2ANY6 5589 aaKnown RBP2.6□□□□□ -1.99
Ccdc54-201ENSMUST00000062439 Mt2P02798 61 aa2.59□□□□□ -1.99
Ccdc54-201ENSMUST00000062439 Gm10024A0A0A0MQA4 119 aa2.57□□□□□ -2
Ccdc54-201ENSMUST00000062439 Gm20661K7N787 53 aa2.57□□□□□ -2
Ccdc54-201ENSMUST00000062439 Mt4P47945 62 aa2.57□□□□□ -2
Ccdc54-201ENSMUST00000062439 Gm40460A0A1B0GR10 244 aa2.56□□□□□ -2
Ccdc54-201ENSMUST00000062439 Krtap8-1O08633 61 aa2.55□□□□□ -2
Ccdc54-201ENSMUST00000062439 Sprr2a3Q4KL71 83 aa2.54□□□□□ -2
Ccdc54-201ENSMUST00000062439 Sprr2a1Q9CQK8 83 aa2.54□□□□□ -2
Ccdc54-201ENSMUST00000062439 Krtap6-3A0A087WQL6 57 aa2.51□□□□□ -2.01
Ccdc54-201ENSMUST00000062439 Gm17402F6Z0L5 76 aa2.51□□□□□ -2.01
Ccdc54-201ENSMUST00000062439 Uqcr11Q9CPX8 56 aa2.49□□□□□ -2.01
Ccdc54-201ENSMUST00000062439 Krtap22-2J3QNX6 67 aa2.47□□□□□ -2.01
Ccdc54-201ENSMUST00000062439 Sprr2kO70562 68 aa2.47□□□□□ -2.01
Ccdc54-201ENSMUST00000062439 Fsip2A2ARZ3 6995 aa2.41□□□□□ -2.02
Ccdc54-201ENSMUST00000062439 Krtap19-9bQ99NG9 58 aa2.36□□□□□ -2.03
Ccdc54-201ENSMUST00000062439 Krtap6-2O08884 159 aa2.33□□□□□ -2.04
Ccdc54-201ENSMUST00000062439 Sprr2gO70558 76 aa2.31□□□□□ -2.04
Ccdc54-201ENSMUST00000062439 Krtap20-2E9Q0A8 60 aa2.29□□□□□ -2.04
Ccdc54-201ENSMUST00000062439 1110025L11RikO09048 78 aa2.28□□□□□ -2.04
Ccdc54-201ENSMUST00000062439 Krtap21-1Q925H4 128 aa2.27□□□□□ -2.05
Ccdc54-201ENSMUST00000062439 Krtap4-16Q91W93 202 aa2.25□□□□□ -2.05
Ccdc54-201ENSMUST00000062439 Gm3880A0A1B0GSB3 72 aa2.23□□□□□ -2.05
Ccdc54-201ENSMUST00000062439 2310046K23RikA0A0A6YVW6 87 aa2.22□□□□□ -2.05
Ccdc54-201ENSMUST00000062439 Sprr2iO70560 76 aa2.16□□□□□ -2.06
Ccdc54-201ENSMUST00000062439 Lce3bQ9CQM7 98 aa2.11□□□□□ -2.07
Ccdc54-201ENSMUST00000062439 Syne1Q6ZWR6 8799 aa2.01□□□□□ -2.09
Ccdc54-201ENSMUST00000062439 Tnp1P10856 55 aa1.99□□□□□ -2.09
Ccdc54-201ENSMUST00000062439 Gm11938Q9D3H4 131 aa1.96□□□□□ -2.1
Ccdc54-201ENSMUST00000062439 Mt1P02802 61 aaKnown RBP1.95□□□□□ -2.1
Ccdc54-201ENSMUST00000062439 Eppk1Q8R0W0 6548 aa1.94□□□□□ -2.1
Ccdc54-201ENSMUST00000062439 Krtap19-4Q925H7 84 aa1.93□□□□□ -2.1
Ccdc54-201ENSMUST00000062439 Macf1Q9QXZ0 7354 aaKnown RBP1.89□□□□□ -2.11
Ccdc54-201ENSMUST00000062439 Sprr2dO70555 85 aa1.87□□□□□ -2.11
Ccdc54-201ENSMUST00000062439 Gm11639A0A1D5RLM8 5808 aa1.85□□□□□ -2.11
Ccdc54-201ENSMUST00000062439 Hmcn1D3YXG0 5634 aa1.83□□□□□ -2.12
Ccdc54-201ENSMUST00000062439 Muc19Q6PZE0 7524 aa1.8□□□□□ -2.12
Ccdc54-201ENSMUST00000062439 Sprr2fO70557 76 aa1.75□□□□□ -2.13
Ccdc54-201ENSMUST00000062439 Gpr98Q8VHN7 6298 aaKnown RBP1.72□□□□□ -2.13
Ccdc54-201ENSMUST00000062439 ObscnA2AAJ9 8891 aaKnown RBP1.71□□□□□ -2.14
Ccdc54-201ENSMUST00000062439 DstQ91ZU6 7393 aaKnown RBP1.68□□□□□ -2.14
Ccdc54-201ENSMUST00000062439 NebE9Q1W3 7152 aa1.64□□□□□ -2.15
Ccdc54-201ENSMUST00000062439 AhnakE9Q616 5656 aaKnown RBP1.6□□□□□ -2.15
Ccdc54-201ENSMUST00000062439 Sprr2eO70556 76 aa1.59□□□□□ -2.15
Ccdc54-201ENSMUST00000062439 Sprr2hO70559 108 aa1.49□□□□□ -2.17
Ccdc54-201ENSMUST00000062439 Muc16A0A140LJ72 8478 aa1.31□□□□□ -2.2
Ccdc54-201ENSMUST00000062439 Sprr2bO70554 98 aa1.1□□□□□ -2.23
Ccdc54-201ENSMUST00000062439 Phgr1Q8K0G7 91 aa0.91□□□□□ -2.26
Retrieved 80 of 22,080 RNA–protein pairs in 370.9 ms