RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Ryr2E9Q401 4966 aaKnown RBP4,24□□□□□ -1,73
Ubr3-201ENSMUST00000055758 Krtap4-1Q3UUY3 169 aa4,22□□□□□ -1,73
Ubr3-201ENSMUST00000055758 Krtap17-1A2A5X6 109 aa4,19□□□□□ -1,74
Ubr3-201ENSMUST00000055758 HydinQ80W93 5154 aa4,17□□□□□ -1,74
Ubr3-201ENSMUST00000055758 Krtap4-9B1AQA9 244 aa4,15□□□□□ -1,74
Ubr3-201ENSMUST00000055758 Syne2Q6ZWQ0 6874 aaKnown RBP4,14□□□□□ -1,75
Ubr3-201ENSMUST00000055758 Gm11564A2A4L9 201 aa4,12□□□□□ -1,75
Ubr3-201ENSMUST00000055758 Gm11563B1AQ90 168 aa4,12□□□□□ -1,75
Ubr3-201ENSMUST00000055758 Gm11595B1AQA7 289 aa4,12□□□□□ -1,75
Ubr3-201ENSMUST00000055758 Krtap4-8B1AQA8 209 aa4,12□□□□□ -1,75
Ubr3-201ENSMUST00000055758 Hmcn2A2AJ76 5100 aa4,11□□□□□ -1,75
Ubr3-201ENSMUST00000055758 Mdn1A2ANY6 5589 aaKnown RBP4,1□□□□□ -1,75
Ubr3-201ENSMUST00000055758 Krtap4-13Q9D7P3 165 aa4,1□□□□□ -1,75
Ubr3-201ENSMUST00000055758 Gm11596B1AQB0 205 aa4,08□□□□□ -1,76
Ubr3-201ENSMUST00000055758 Herc1E9PZP8 4859 aa4,05□□□□□ -1,76
Ubr3-201ENSMUST00000055758 Birc6O88738 4882 aa4,03□□□□□ -1,76
Ubr3-201ENSMUST00000055758 Fsip2A2ARZ3 6995 aa4,01□□□□□ -1,77
Ubr3-201ENSMUST00000055758 Kiaa1109A2AAE1 5005 aa3,99□□□□□ -1,77
Ubr3-201ENSMUST00000055758 Ubr4A2AN08 5180 aa3,92□□□□□ -1,78
Ubr3-201ENSMUST00000055758 ZanO88799 5376 aa3,92□□□□□ -1,78
Ubr3-201ENSMUST00000055758 Muc16A0A140LJ72 8478 aa3,85□□□□□ -1,79
Ubr3-201ENSMUST00000055758 Mt1P02802 61 aaKnown RBP3,79□□□□□ -1,8
Ubr3-201ENSMUST00000055758 Gm11554B1AQB2 190 aa3,78□□□□□ -1,8
Ubr3-201ENSMUST00000055758 ObscnA2AAJ9 8891 aaKnown RBP3,75□□□□□ -1,81
Ubr3-201ENSMUST00000055758 Abca13Q5SSE9 5034 aa3,72□□□□□ -1,81
Ubr3-201ENSMUST00000055758 4932415D10RikA0A1W2P6U8 4986 aa3,71□□□□□ -1,82
Ubr3-201ENSMUST00000055758 Muc5bE9Q5I3 4800 aa3,62□□□□□ -1,83
Ubr3-201ENSMUST00000055758 Krtap6-3A0A087WQL6 57 aa3,56□□□□□ -1,84
Ubr3-201ENSMUST00000055758 Fat4Q2PZL6 4981 aa3,53□□□□□ -1,84
Ubr3-201ENSMUST00000055758 Krtap20-2E9Q0A8 60 aa3,52□□□□□ -1,85
Ubr3-201ENSMUST00000055758 SspoQ8CG65 4998 aa3,4□□□□□ -1,86
Ubr3-201ENSMUST00000055758 Rnf213E9Q555 5152 aaKnown RBP3,35□□□□□ -1,87
Ubr3-201ENSMUST00000055758 Ush2AQ2QI47 5193 aa3,28□□□□□ -1,89
Ubr3-201ENSMUST00000055758 A0A1Y7VLE6 161 aa3,19□□□□□ -1,9
Ubr3-201ENSMUST00000055758 Macf1Q9QXZ0 7354 aaKnown RBP3,18□□□□□ -1,9
Ubr3-201ENSMUST00000055758 Phgr1Q8K0G7 91 aa3,17□□□□□ -1,9
Ubr3-201ENSMUST00000055758 1110025L11RikO09048 78 aa3,16□□□□□ -1,9
Ubr3-201ENSMUST00000055758 Krtap6-5Q925H3 78 aa3,16□□□□□ -1,9
Ubr3-201ENSMUST00000055758 Gm11568A2A4M2 211 aa3,12□□□□□ -1,91
Ubr3-201ENSMUST00000055758 Krtap9-1Q64526 186 aa3,12□□□□□ -1,91
Ubr3-201ENSMUST00000055758 Gm11559Q9D3H7 191 aa3,12□□□□□ -1,91
Ubr3-201ENSMUST00000055758 Muc19Q6PZE0 7524 aa3,11□□□□□ -1,91
Ubr3-201ENSMUST00000055758 Gm11555B1AQ89 175 aa3,07□□□□□ -1,92
Ubr3-201ENSMUST00000055758 Gm10229O08631 77 aa3,05□□□□□ -1,92
Ubr3-201ENSMUST00000055758 DstQ91ZU6 7393 aaKnown RBP3,03□□□□□ -1,92
Ubr3-201ENSMUST00000055758 NebE9Q1W3 7152 aa3,03□□□□□ -1,92
Ubr3-201ENSMUST00000055758 Gm11567Q9D141 195 aa2,95□□□□□ -1,94
Ubr3-201ENSMUST00000055758 A030003K21RikA0A1Y7VIM3 128 aa2,93□□□□□ -1,94
Ubr3-201ENSMUST00000055758 Kmt2dQ6PDK2 5588 aa2,78□□□□□ -1,96
Ubr3-201ENSMUST00000055758 Gm6217A0A1Y7VJK9 128 aa2,73□□□□□ -1,97
Ubr3-201ENSMUST00000055758 Krtap28-10A0A1Y7VP58 119 aa2,69□□□□□ -1,98
Ubr3-201ENSMUST00000055758 A0A1Y7VJ07 166 aa2,65□□□□□ -1,99
Ubr3-201ENSMUST00000055758 Krtap28-13A0A087WQP5 138 aa2,63□□□□□ -1,99
Ubr3-201ENSMUST00000055758 A0A1Y7VJH8 109 aa2,61□□□□□ -1,99
Ubr3-201ENSMUST00000055758 A030005K14RikA0A1Y7VNY1 122 aa2,56□□□□□ -2
Ubr3-201ENSMUST00000055758 Gm7544A0A1Y7VJ58 118 aa2,5□□□□□ -2,01
Ubr3-201ENSMUST00000055758 A030005L19RikA0A1Y7VIU2 113 aa2,49□□□□□ -2,01
Ubr3-201ENSMUST00000055758 A030014E15RikA0A1Y7VJV2 120 aa2,46□□□□□ -2,02
Ubr3-201ENSMUST00000055758 Eppk1Q8R0W0 6548 aa2,43□□□□□ -2,02
Ubr3-201ENSMUST00000055758 Krtap6-2O08884 159 aa2,38□□□□□ -2,03
Ubr3-201ENSMUST00000055758 Krtap21-1Q925H4 128 aa2,17□□□□□ -2,06
Ubr3-201ENSMUST00000055758 Hmcn1D3YXG0 5634 aa2,12□□□□□ -2,07
Ubr3-201ENSMUST00000055758 Krtap5-2Q9D5Z7 189 aa2,06□□□□□ -2,08
Ubr3-201ENSMUST00000055758 A0A286YCP9 139 aa1,96□□□□□ -2,1
Ubr3-201ENSMUST00000055758 Gm11639A0A1D5RLM8 5808 aa1,9□□□□□ -2,11
Ubr3-201ENSMUST00000055758 Gm4553A0A1B0GSA9 284 aa1,89□□□□□ -2,11
Ubr3-201ENSMUST00000055758 Gpr98Q8VHN7 6298 aaKnown RBP1,89□□□□□ -2,11
Ubr3-201ENSMUST00000055758 Gm2431E9Q8S1 172 aa1,8□□□□□ -2,12
Ubr3-201ENSMUST00000055758 Gm10153A0A1B0GRL1 320 aa1,73□□□□□ -2,13
Ubr3-201ENSMUST00000055758 AhnakE9Q616 5656 aaKnown RBP1,65□□□□□ -2,14
Ubr3-201ENSMUST00000055758 Gm45337A0A1B0GS71 263 aa1,51□□□□□ -2,17
Ubr3-201ENSMUST00000055758 Gm40460A0A1B0GR10 244 aa1,45□□□□□ -2,18
Ubr3-201ENSMUST00000055758 Gm7579A0A1B0GRJ4 243 aa1,45□□□□□ -2,18
Ubr3-201ENSMUST00000055758 Krtap5-5Q2TA51 241 aa1,45□□□□□ -2,18
Ubr3-201ENSMUST00000055758 Krtap5-4Q62220 223 aa1,45□□□□□ -2,18
Ubr3-201ENSMUST00000055758 Gm39115A0A1B0GSH7 232 aa1,36□□□□□ -2,19
Ubr3-201ENSMUST00000055758 Gm29735A0A1B0GT06 219 aa1,11□□□□□ -2,23
Ubr3-201ENSMUST00000055758 Krtap5-1Q64507 230 aa1,08□□□□□ -2,24
Ubr3-201ENSMUST00000055758 Gm45618A0A1B0GSA0 219 aa1□□□□□ -2,25
Ubr3-201ENSMUST00000055758 Gm4559A4IF42 199 aa0,66□□□□□ -2,3
Retrieved 80 of 22,080 RNA–protein pairs in 9,5 ms