RNA–Protein interactions for RNA: ENSMUST00000055506.8

Gtf3c1-201, Transcript of General transcription factor 3C polypeptide 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Gtf3c1, Length 6,961 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c1-201ENSMUST00000055506 Lce1a2Q9D1K4 149 aa3.34□□□□□ -1.87
Gtf3c1-201ENSMUST00000055506 Sprr2dO70555 85 aa3.33□□□□□ -1.88
Gtf3c1-201ENSMUST00000055506 PcloQ9QYX7 5068 aa3.25□□□□□ -1.89
Gtf3c1-201ENSMUST00000055506 Sprr2hO70559 108 aa3.23□□□□□ -1.89
Gtf3c1-201ENSMUST00000055506 Gm11562A0PK51 136 aa3.22□□□□□ -1.89
Gtf3c1-201ENSMUST00000055506 Herc1E9PZP8 4859 aa3.21□□□□□ -1.9
Gtf3c1-201ENSMUST00000055506 Lce1a1Q9CQH5 143 aa3.21□□□□□ -1.9
Gtf3c1-201ENSMUST00000055506 Kiaa1109A2AAE1 5005 aa3.2□□□□□ -1.9
Gtf3c1-201ENSMUST00000055506 Gm11938Q9D3H4 131 aa3.19□□□□□ -1.9
Gtf3c1-201ENSMUST00000055506 Syne2Q6ZWQ0 6874 aaKnown RBP3.16□□□□□ -1.9
Gtf3c1-201ENSMUST00000055506 Mdn1A2ANY6 5589 aaKnown RBP3.15□□□□□ -1.91
Gtf3c1-201ENSMUST00000055506 Muc16A0A140LJ72 8478 aa3.15□□□□□ -1.91
Gtf3c1-201ENSMUST00000055506 Birc6O88738 4882 aa3.15□□□□□ -1.91
Gtf3c1-201ENSMUST00000055506 4932415D10RikA0A1W2P6U8 4986 aa3.11□□□□□ -1.91
Gtf3c1-201ENSMUST00000055506 Lce1kJ3QP15 125 aa3.1□□□□□ -1.91
Gtf3c1-201ENSMUST00000055506 Krtap6-3A0A087WQL6 57 aa3.09□□□□□ -1.91
Gtf3c1-201ENSMUST00000055506 Gm11554B1AQB2 190 aa3.05□□□□□ -1.92
Gtf3c1-201ENSMUST00000055506 Fsip2A2ARZ3 6995 aa3.05□□□□□ -1.92
Gtf3c1-201ENSMUST00000055506 Hmcn2A2AJ76 5100 aa3.04□□□□□ -1.92
Gtf3c1-201ENSMUST00000055506 ZanO88799 5376 aa2.99□□□□□ -1.93
Gtf3c1-201ENSMUST00000055506 Abca13Q5SSE9 5034 aa2.97□□□□□ -1.93
Gtf3c1-201ENSMUST00000055506 Ubr4A2AN08 5180 aa2.97□□□□□ -1.93
Gtf3c1-201ENSMUST00000055506 Muc5bE9Q5I3 4800 aa2.96□□□□□ -1.94
Gtf3c1-201ENSMUST00000055506 Sprr2bO70554 98 aa2.95□□□□□ -1.94
Gtf3c1-201ENSMUST00000055506 Mt3P28184 68 aa2.91□□□□□ -1.94
Gtf3c1-201ENSMUST00000055506 Fat4Q2PZL6 4981 aa2.91□□□□□ -1.94
Gtf3c1-201ENSMUST00000055506 Krtap31-2Q8CAY5 177 aa2.9□□□□□ -1.95
Gtf3c1-201ENSMUST00000055506 ObscnA2AAJ9 8891 aaKnown RBP2.8□□□□□ -1.96
Gtf3c1-201ENSMUST00000055506 Krtap20-2E9Q0A8 60 aa2.79□□□□□ -1.96
Gtf3c1-201ENSMUST00000055506 Ush2AQ2QI47 5193 aa2.76□□□□□ -1.97
Gtf3c1-201ENSMUST00000055506 Rnf213E9Q555 5152 aaKnown RBP2.64□□□□□ -1.99
Gtf3c1-201ENSMUST00000055506 Mt1P02802 61 aaKnown RBP2.59□□□□□ -1.99
Gtf3c1-201ENSMUST00000055506 SspoQ8CG65 4998 aa2.59□□□□□ -2
Gtf3c1-201ENSMUST00000055506 Gm11555B1AQ89 175 aa2.55□□□□□ -2
Gtf3c1-201ENSMUST00000055506 Macf1Q9QXZ0 7354 aaKnown RBP2.51□□□□□ -2.01
Gtf3c1-201ENSMUST00000055506 Muc19Q6PZE0 7524 aa2.48□□□□□ -2.01
Gtf3c1-201ENSMUST00000055506 DstQ91ZU6 7393 aaKnown RBP2.39□□□□□ -2.03
Gtf3c1-201ENSMUST00000055506 Eppk1Q8R0W0 6548 aa2.37□□□□□ -2.03
Gtf3c1-201ENSMUST00000055506 NebE9Q1W3 7152 aa2.31□□□□□ -2.04
Gtf3c1-201ENSMUST00000055506 Gm11559Q9D3H7 191 aa2.26□□□□□ -2.05
Gtf3c1-201ENSMUST00000055506 Phgr1Q8K0G7 91 aa2.25□□□□□ -2.05
Gtf3c1-201ENSMUST00000055506 1110025L11RikO09048 78 aa2.19□□□□□ -2.06
Gtf3c1-201ENSMUST00000055506 Krtap6-5Q925H3 78 aa2.19□□□□□ -2.06
Gtf3c1-201ENSMUST00000055506 Gm10229O08631 77 aa2.12□□□□□ -2.07
Gtf3c1-201ENSMUST00000055506 Gm11568A2A4M2 211 aa2.08□□□□□ -2.08
Gtf3c1-201ENSMUST00000055506 Krtap9-1Q64526 186 aa2.08□□□□□ -2.08
Gtf3c1-201ENSMUST00000055506 Kmt2dQ6PDK2 5588 aa1.97□□□□□ -2.09
Gtf3c1-201ENSMUST00000055506 Gm11567Q9D141 195 aa1.95□□□□□ -2.1
Gtf3c1-201ENSMUST00000055506 Krtap5-2Q9D5Z7 189 aa1.77□□□□□ -2.13
Gtf3c1-201ENSMUST00000055506 Gpr98Q8VHN7 6298 aaKnown RBP1.75□□□□□ -2.13
Gtf3c1-201ENSMUST00000055506 Gm4553A0A1B0GSA9 284 aa1.69□□□□□ -2.14
Gtf3c1-201ENSMUST00000055506 Gm2431E9Q8S1 172 aa1.68□□□□□ -2.14
Gtf3c1-201ENSMUST00000055506 Krtap6-2O08884 159 aa1.65□□□□□ -2.14
Gtf3c1-201ENSMUST00000055506 A030005L19RikA0A1Y7VIU2 113 aa1.64□□□□□ -2.15
Gtf3c1-201ENSMUST00000055506 Gm11639A0A1D5RLM8 5808 aa1.58□□□□□ -2.16
Gtf3c1-201ENSMUST00000055506 Hmcn1D3YXG0 5634 aa1.53□□□□□ -2.16
Gtf3c1-201ENSMUST00000055506 Krtap21-1Q925H4 128 aa1.51□□□□□ -2.17
Gtf3c1-201ENSMUST00000055506 Gm10153A0A1B0GRL1 320 aa1.4□□□□□ -2.18
Gtf3c1-201ENSMUST00000055506 AhnakE9Q616 5656 aaKnown RBP1.38□□□□□ -2.19
Gtf3c1-201ENSMUST00000055506 Gm45337A0A1B0GS71 263 aa1.38□□□□□ -2.19
Gtf3c1-201ENSMUST00000055506 Gm39115A0A1B0GSH7 232 aa1.33□□□□□ -2.2
Gtf3c1-201ENSMUST00000055506 Gm40460A0A1B0GR10 244 aa1.31□□□□□ -2.2
Gtf3c1-201ENSMUST00000055506 Gm7579A0A1B0GRJ4 243 aa1.31□□□□□ -2.2
Gtf3c1-201ENSMUST00000055506 Krtap5-5Q2TA51 241 aa1.31□□□□□ -2.2
Gtf3c1-201ENSMUST00000055506 Krtap5-4Q62220 223 aa1.31□□□□□ -2.2
Gtf3c1-201ENSMUST00000055506 A0A1Y7VJH8 109 aa1.24□□□□□ -2.21
Gtf3c1-201ENSMUST00000055506 Gm45618A0A1B0GSA0 219 aa1.14□□□□□ -2.23
Gtf3c1-201ENSMUST00000055506 A0A1Y7VLE6 161 aa1.12□□□□□ -2.23
Gtf3c1-201ENSMUST00000055506 Krtap5-1Q64507 230 aa1.11□□□□□ -2.23
Gtf3c1-201ENSMUST00000055506 Gm29735A0A1B0GT06 219 aa0.95□□□□□ -2.26
Gtf3c1-201ENSMUST00000055506 A0A286YCP9 139 aa0.92□□□□□ -2.26
Gtf3c1-201ENSMUST00000055506 A0A1Y7VJ07 166 aa0.91□□□□□ -2.26
Gtf3c1-201ENSMUST00000055506 A030014E15RikA0A1Y7VJV2 120 aa0.78□□□□□ -2.29
Gtf3c1-201ENSMUST00000055506 A030003K21RikA0A1Y7VIM3 128 aa0.77□□□□□ -2.29
Gtf3c1-201ENSMUST00000055506 A030005K14RikA0A1Y7VNY1 122 aa0.75□□□□□ -2.29
Gtf3c1-201ENSMUST00000055506 Gm4559A4IF42 199 aa0.7□□□□□ -2.3
Gtf3c1-201ENSMUST00000055506 Krtap28-13A0A087WQP5 138 aa0.68□□□□□ -2.3
Gtf3c1-201ENSMUST00000055506 Krtap28-10A0A1Y7VP58 119 aa0.63□□□□□ -2.31
Gtf3c1-201ENSMUST00000055506 Gm7544A0A1Y7VJ58 118 aa0.61□□□□□ -2.31
Gtf3c1-201ENSMUST00000055506 Gm6217A0A1Y7VJK9 128 aa0.6□□□□□ -2.31
Retrieved 80 of 22,080 RNA–protein pairs in 63.7 ms