RNA–Protein interactions for RNA: ENSMUST00000053856.5

Pcdhb17-201, Transcript of MCG141290, mousemouse

APPRIS P1 BASIC

Gene Pcdhb17, Length 4,660 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17-201ENSMUST00000053856 4932415D10RikA0A1W2P6U8 4986 aa3.8□□□□□ -1.8
Pcdhb17-201ENSMUST00000053856 Sprr2eO70556 76 aa3.73□□□□□ -1.81
Pcdhb17-201ENSMUST00000053856 Lce1eQ9D139 143 aa3.72□□□□□ -1.81
Pcdhb17-201ENSMUST00000053856 Fat4Q2PZL6 4981 aa3.71□□□□□ -1.82
Pcdhb17-201ENSMUST00000053856 Rnf213E9Q555 5152 aaKnown RBP3.69□□□□□ -1.82
Pcdhb17-201ENSMUST00000053856 A030003K21RikA0A1Y7VIM3 128 aa3.68□□□□□ -1.82
Pcdhb17-201ENSMUST00000053856 Lce1iQ9D6P5 149 aa3.67□□□□□ -1.82
Pcdhb17-201ENSMUST00000053856 Lce1hQ9D6R3 140 aa3.67□□□□□ -1.82
Pcdhb17-201ENSMUST00000053856 Gm10024A0A0A0MQA4 119 aa3.67□□□□□ -1.82
Pcdhb17-201ENSMUST00000053856 Krtap4-6Q3V4B7 195 aa3.67□□□□□ -1.82
Pcdhb17-201ENSMUST00000053856 Mt4P47945 62 aa3.67□□□□□ -1.82
Pcdhb17-201ENSMUST00000053856 Ush2AQ2QI47 5193 aa3.65□□□□□ -1.82
Pcdhb17-201ENSMUST00000053856 ZanO88799 5376 aa3.65□□□□□ -1.82
Pcdhb17-201ENSMUST00000053856 Gm11562A0PK51 136 aa3.62□□□□□ -1.83
Pcdhb17-201ENSMUST00000053856 Gm11596B1AQB0 205 aa3.6□□□□□ -1.83
Pcdhb17-201ENSMUST00000053856 Krtap31-1Q9D644 177 aa3.59□□□□□ -1.84
Pcdhb17-201ENSMUST00000053856 Lce1a2Q9D1K4 149 aa3.58□□□□□ -1.84
Pcdhb17-201ENSMUST00000053856 Krtap17-1A2A5X6 109 aa3.54□□□□□ -1.84
Pcdhb17-201ENSMUST00000053856 Muc5bE9Q5I3 4800 aa3.54□□□□□ -1.84
Pcdhb17-201ENSMUST00000053856 Gm11564A2A4L9 201 aa3.52□□□□□ -1.85
Pcdhb17-201ENSMUST00000053856 Gm11595B1AQA7 289 aa3.52□□□□□ -1.85
Pcdhb17-201ENSMUST00000053856 Krtap4-8B1AQA8 209 aa3.52□□□□□ -1.85
Pcdhb17-201ENSMUST00000053856 Hmcn2A2AJ76 5100 aa3.51□□□□□ -1.85
Pcdhb17-201ENSMUST00000053856 Gm6217A0A1Y7VJK9 128 aa3.48□□□□□ -1.85
Pcdhb17-201ENSMUST00000053856 Krtap4-9B1AQA9 244 aa3.47□□□□□ -1.85
Pcdhb17-201ENSMUST00000053856 Gm11938Q9D3H4 131 aa3.47□□□□□ -1.85
Pcdhb17-201ENSMUST00000053856 Krtap31-2Q8CAY5 177 aa3.44□□□□□ -1.86
Pcdhb17-201ENSMUST00000053856 2300003K06RikA2A4M0 262 aa3.43□□□□□ -1.86
Pcdhb17-201ENSMUST00000053856 Krtap6-3A0A087WQL6 57 aa3.42□□□□□ -1.86
Pcdhb17-201ENSMUST00000053856 Sprr2dO70555 85 aa3.4□□□□□ -1.87
Pcdhb17-201ENSMUST00000053856 Sprr2hO70559 108 aa3.38□□□□□ -1.87
Pcdhb17-201ENSMUST00000053856 Mt3P28184 68 aa3.36□□□□□ -1.87
Pcdhb17-201ENSMUST00000053856 Fsip2A2ARZ3 6995 aa3.34□□□□□ -1.88
Pcdhb17-201ENSMUST00000053856 Muc16A0A140LJ72 8478 aa3.33□□□□□ -1.88
Pcdhb17-201ENSMUST00000053856 Krtap4-13Q9D7P3 165 aa3.31□□□□□ -1.88
Pcdhb17-201ENSMUST00000053856 Eppk1Q8R0W0 6548 aa3.29□□□□□ -1.88
Pcdhb17-201ENSMUST00000053856 Lce1kJ3QP15 125 aa3.27□□□□□ -1.89
Pcdhb17-201ENSMUST00000053856 SspoQ8CG65 4998 aa3.21□□□□□ -1.9
Pcdhb17-201ENSMUST00000053856 Lce1a1Q9CQH5 143 aa3.19□□□□□ -1.9
Pcdhb17-201ENSMUST00000053856 Mt1P02802 61 aaKnown RBP3.18□□□□□ -1.9
Pcdhb17-201ENSMUST00000053856 Syne2Q6ZWQ0 6874 aaKnown RBP3.18□□□□□ -1.9
Pcdhb17-201ENSMUST00000053856 A0A286YCP9 139 aa3.12□□□□□ -1.91
Pcdhb17-201ENSMUST00000053856 Krtap4-16Q91W93 202 aa3.07□□□□□ -1.92
Pcdhb17-201ENSMUST00000053856 ObscnA2AAJ9 8891 aaKnown RBP3.03□□□□□ -1.92
Pcdhb17-201ENSMUST00000053856 Macf1Q9QXZ0 7354 aaKnown RBP3□□□□□ -1.93
Pcdhb17-201ENSMUST00000053856 Krtap20-2E9Q0A8 60 aa2.99□□□□□ -1.93
Pcdhb17-201ENSMUST00000053856 Sprr2bO70554 98 aa2.95□□□□□ -1.94
Pcdhb17-201ENSMUST00000053856 Gm11554B1AQB2 190 aa2.93□□□□□ -1.94
Pcdhb17-201ENSMUST00000053856 Kmt2dQ6PDK2 5588 aa2.71□□□□□ -1.98
Pcdhb17-201ENSMUST00000053856 DstQ91ZU6 7393 aaKnown RBP2.69□□□□□ -1.98
Pcdhb17-201ENSMUST00000053856 Muc19Q6PZE0 7524 aa2.63□□□□□ -1.99
Pcdhb17-201ENSMUST00000053856 NebE9Q1W3 7152 aa2.62□□□□□ -1.99
Pcdhb17-201ENSMUST00000053856 Gpr98Q8VHN7 6298 aaKnown RBP2.62□□□□□ -1.99
Pcdhb17-201ENSMUST00000053856 Gm11559Q9D3H7 191 aa2.56□□□□□ -2
Pcdhb17-201ENSMUST00000053856 1110025L11RikO09048 78 aa2.5□□□□□ -2.01
Pcdhb17-201ENSMUST00000053856 Krtap6-5Q925H3 78 aa2.5□□□□□ -2.01
Pcdhb17-201ENSMUST00000053856 Gm11639A0A1D5RLM8 5808 aa2.49□□□□□ -2.01
Pcdhb17-201ENSMUST00000053856 Gm39115A0A1B0GSH7 232 aa2.43□□□□□ -2.02
Pcdhb17-201ENSMUST00000053856 Gm45618A0A1B0GSA0 219 aa2.42□□□□□ -2.02
Pcdhb17-201ENSMUST00000053856 Gm2431E9Q8S1 172 aa2.37□□□□□ -2.03
Pcdhb17-201ENSMUST00000053856 Krtap5-2Q9D5Z7 189 aa2.37□□□□□ -2.03
Pcdhb17-201ENSMUST00000053856 Gm11568A2A4M2 211 aa2.36□□□□□ -2.03
Pcdhb17-201ENSMUST00000053856 Krtap9-1Q64526 186 aa2.36□□□□□ -2.03
Pcdhb17-201ENSMUST00000053856 Gm10229O08631 77 aa2.36□□□□□ -2.03
Pcdhb17-201ENSMUST00000053856 Gm4553A0A1B0GSA9 284 aa2.28□□□□□ -2.04
Pcdhb17-201ENSMUST00000053856 Gm29735A0A1B0GT06 219 aa2.28□□□□□ -2.04
Pcdhb17-201ENSMUST00000053856 Hmcn1D3YXG0 5634 aa2.19□□□□□ -2.06
Pcdhb17-201ENSMUST00000053856 Gm11567Q9D141 195 aa2.15□□□□□ -2.07
Pcdhb17-201ENSMUST00000053856 Phgr1Q8K0G7 91 aa2.1□□□□□ -2.07
Pcdhb17-201ENSMUST00000053856 Gm10153A0A1B0GRL1 320 aa2.05□□□□□ -2.08
Pcdhb17-201ENSMUST00000053856 Gm40460A0A1B0GR10 244 aa2.02□□□□□ -2.09
Pcdhb17-201ENSMUST00000053856 Gm7579A0A1B0GRJ4 243 aa2.02□□□□□ -2.09
Pcdhb17-201ENSMUST00000053856 Krtap5-5Q2TA51 241 aa2.02□□□□□ -2.09
Pcdhb17-201ENSMUST00000053856 Krtap5-4Q62220 223 aa2.02□□□□□ -2.09
Pcdhb17-201ENSMUST00000053856 Gm45337A0A1B0GS71 263 aa2.02□□□□□ -2.09
Pcdhb17-201ENSMUST00000053856 AhnakE9Q616 5656 aaKnown RBP1.98□□□□□ -2.09
Pcdhb17-201ENSMUST00000053856 Krtap6-2O08884 159 aa1.93□□□□□ -2.1
Pcdhb17-201ENSMUST00000053856 Krtap21-1Q925H4 128 aa1.78□□□□□ -2.13
Pcdhb17-201ENSMUST00000053856 Krtap5-1Q64507 230 aa1.64□□□□□ -2.15
Pcdhb17-201ENSMUST00000053856 Gm4559A4IF42 199 aa1.46□□□□□ -2.18
Retrieved 80 of 22,080 RNA–protein pairs in 72.5 ms