RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Gm11564A2A4L9 201 aa5,82□□□□□ -1,48
Scaf11-201ENSMUST00000047835 Gm11563B1AQ90 168 aa5,82□□□□□ -1,48
Scaf11-201ENSMUST00000047835 Gm11595B1AQA7 289 aa5,82□□□□□ -1,48
Scaf11-201ENSMUST00000047835 Krtap4-8B1AQA8 209 aa5,82□□□□□ -1,48
Scaf11-201ENSMUST00000047835 Ush2AQ2QI47 5193 aa5,8□□□□□ -1,48
Scaf11-201ENSMUST00000047835 Krtap4-9B1AQA9 244 aa5,76□□□□□ -1,49
Scaf11-201ENSMUST00000047835 2300003K06RikA2A4M0 262 aa5,75□□□□□ -1,49
Scaf11-201ENSMUST00000047835 Muc5bE9Q5I3 4800 aa5,71□□□□□ -1,5
Scaf11-201ENSMUST00000047835 Hmcn2A2AJ76 5100 aa5,68□□□□□ -1,5
Scaf11-201ENSMUST00000047835 Krtap4-7Q9D732 168 aa5,66□□□□□ -1,5
Scaf11-201ENSMUST00000047835 Rnf213E9Q555 5152 aaKnown RBP5,65□□□□□ -1,5
Scaf11-201ENSMUST00000047835 Krtap4-13Q9D7P3 165 aa5,64□□□□□ -1,51
Scaf11-201ENSMUST00000047835 Fsip2A2ARZ3 6995 aa5,64□□□□□ -1,51
Scaf11-201ENSMUST00000047835 Syne2Q6ZWQ0 6874 aaKnown RBP5,57□□□□□ -1,52
Scaf11-201ENSMUST00000047835 Lce1kJ3QP15 125 aa5,5□□□□□ -1,53
Scaf11-201ENSMUST00000047835 Gm11562A0PK51 136 aa5,49□□□□□ -1,53
Scaf11-201ENSMUST00000047835 Gm11938Q9D3H4 131 aa5,36□□□□□ -1,55
Scaf11-201ENSMUST00000047835 Syne1Q6ZWR6 8799 aa5,33□□□□□ -1,56
Scaf11-201ENSMUST00000047835 Sprr2dO70555 85 aa5,3□□□□□ -1,56
Scaf11-201ENSMUST00000047835 SspoQ8CG65 4998 aa5,29□□□□□ -1,56
Scaf11-201ENSMUST00000047835 Krtap31-1Q9D644 177 aa5,25□□□□□ -1,57
Scaf11-201ENSMUST00000047835 Sprr2hO70559 108 aa5,21□□□□□ -1,58
Scaf11-201ENSMUST00000047835 Lce1a1Q9CQH5 143 aa5,2□□□□□ -1,58
Scaf11-201ENSMUST00000047835 Mt3P28184 68 aa5,17□□□□□ -1,58
Scaf11-201ENSMUST00000047835 Krtap6-3A0A087WQL6 57 aa5,11□□□□□ -1,59
Scaf11-201ENSMUST00000047835 Gm11554B1AQB2 190 aa5,02□□□□□ -1,61
Scaf11-201ENSMUST00000047835 A0A1Y7VLE6 161 aa4,91□□□□□ -1,62
Scaf11-201ENSMUST00000047835 Krtap4-16Q91W93 202 aa4,89□□□□□ -1,63
Scaf11-201ENSMUST00000047835 Krtap20-2E9Q0A8 60 aa4,88□□□□□ -1,63
Scaf11-201ENSMUST00000047835 Mt1P02802 61 aaKnown RBP4,82□□□□□ -1,64
Scaf11-201ENSMUST00000047835 A0A1Y7VJH8 109 aa4,7□□□□□ -1,66
Scaf11-201ENSMUST00000047835 Gm11555B1AQ89 175 aa4,58□□□□□ -1,68
Scaf11-201ENSMUST00000047835 Muc16A0A140LJ72 8478 aa4,58□□□□□ -1,68
Scaf11-201ENSMUST00000047835 Krtap28-10A0A1Y7VP58 119 aa4,57□□□□□ -1,68
Scaf11-201ENSMUST00000047835 Sprr2bO70554 98 aa4,55□□□□□ -1,68
Scaf11-201ENSMUST00000047835 Macf1Q9QXZ0 7354 aaKnown RBP4,51□□□□□ -1,69
Scaf11-201ENSMUST00000047835 A030003K21RikA0A1Y7VIM3 128 aa4,44□□□□□ -1,7
Scaf11-201ENSMUST00000047835 ObscnA2AAJ9 8891 aaKnown RBP4,44□□□□□ -1,7
Scaf11-201ENSMUST00000047835 Krtap28-13A0A087WQP5 138 aa4,4□□□□□ -1,71
Scaf11-201ENSMUST00000047835 DstQ91ZU6 7393 aaKnown RBP4,34□□□□□ -1,71
Scaf11-201ENSMUST00000047835 Eppk1Q8R0W0 6548 aa4,31□□□□□ -1,72
Scaf11-201ENSMUST00000047835 NebE9Q1W3 7152 aa4,29□□□□□ -1,72
Scaf11-201ENSMUST00000047835 A030005K14RikA0A1Y7VNY1 122 aa4,29□□□□□ -1,72
Scaf11-201ENSMUST00000047835 A030005L19RikA0A1Y7VIU2 113 aa4,24□□□□□ -1,73
Scaf11-201ENSMUST00000047835 Kmt2dQ6PDK2 5588 aa4,2□□□□□ -1,74
Scaf11-201ENSMUST00000047835 Gm7544A0A1Y7VJ58 118 aa4,18□□□□□ -1,74
Scaf11-201ENSMUST00000047835 Gm6217A0A1Y7VJK9 128 aa4,16□□□□□ -1,74
Scaf11-201ENSMUST00000047835 A0A1Y7VJ07 166 aa4,14□□□□□ -1,75
Scaf11-201ENSMUST00000047835 Krtap31-2Q8CAY5 177 aa4,11□□□□□ -1,75
Scaf11-201ENSMUST00000047835 Muc19Q6PZE0 7524 aa3,99□□□□□ -1,77
Scaf11-201ENSMUST00000047835 Gm11568A2A4M2 211 aa3,94□□□□□ -1,78
Scaf11-201ENSMUST00000047835 Krtap9-1Q64526 186 aa3,94□□□□□ -1,78
Scaf11-201ENSMUST00000047835 Gm11559Q9D3H7 191 aa3,94□□□□□ -1,78
Scaf11-201ENSMUST00000047835 1110025L11RikO09048 78 aa3,91□□□□□ -1,78
Scaf11-201ENSMUST00000047835 Krtap6-5Q925H3 78 aa3,91□□□□□ -1,78
Scaf11-201ENSMUST00000047835 A030014E15RikA0A1Y7VJV2 120 aa3,79□□□□□ -1,8
Scaf11-201ENSMUST00000047835 Gm10229O08631 77 aa3,7□□□□□ -1,82
Scaf11-201ENSMUST00000047835 Gm11639A0A1D5RLM8 5808 aa3,54□□□□□ -1,84
Scaf11-201ENSMUST00000047835 Krtap5-2Q9D5Z7 189 aa3,49□□□□□ -1,85
Scaf11-201ENSMUST00000047835 Gpr98Q8VHN7 6298 aaKnown RBP3,48□□□□□ -1,85
Scaf11-201ENSMUST00000047835 Phgr1Q8K0G7 91 aa3,38□□□□□ -1,87
Scaf11-201ENSMUST00000047835 Hmcn1D3YXG0 5634 aa3,38□□□□□ -1,87
Scaf11-201ENSMUST00000047835 Gm4553A0A1B0GSA9 284 aa3,27□□□□□ -1,89
Scaf11-201ENSMUST00000047835 Gm2431E9Q8S1 172 aa3,16□□□□□ -1,9
Scaf11-201ENSMUST00000047835 A0A286YCP9 139 aa3,04□□□□□ -1,92
Scaf11-201ENSMUST00000047835 AhnakE9Q616 5656 aaKnown RBP3,04□□□□□ -1,92
Scaf11-201ENSMUST00000047835 Krtap6-2O08884 159 aa3□□□□□ -1,93
Scaf11-201ENSMUST00000047835 Gm10153A0A1B0GRL1 320 aa3□□□□□ -1,93
Scaf11-201ENSMUST00000047835 Gm45337A0A1B0GS71 263 aa2,84□□□□□ -1,96
Scaf11-201ENSMUST00000047835 Krtap21-1Q925H4 128 aa2,79□□□□□ -1,96
Scaf11-201ENSMUST00000047835 Gm40460A0A1B0GR10 244 aa2,77□□□□□ -1,97
Scaf11-201ENSMUST00000047835 Gm7579A0A1B0GRJ4 243 aa2,77□□□□□ -1,97
Scaf11-201ENSMUST00000047835 Krtap5-5Q2TA51 241 aa2,77□□□□□ -1,97
Scaf11-201ENSMUST00000047835 Krtap5-4Q62220 223 aa2,77□□□□□ -1,97
Scaf11-201ENSMUST00000047835 Gm39115A0A1B0GSH7 232 aa2,6□□□□□ -1,99
Scaf11-201ENSMUST00000047835 Gm11567Q9D141 195 aa2,47□□□□□ -2,01
Scaf11-201ENSMUST00000047835 Gm45618A0A1B0GSA0 219 aa2,2□□□□□ -2,06
Scaf11-201ENSMUST00000047835 Gm29735A0A1B0GT06 219 aa2,07□□□□□ -2,08
Scaf11-201ENSMUST00000047835 Krtap5-1Q64507 230 aa1,76□□□□□ -2,13
Scaf11-201ENSMUST00000047835 Gm4559A4IF42 199 aa1,33□□□□□ -2,2
Retrieved 80 of 22,080 RNA–protein pairs in 10,2 ms